Miyakogusa Predicted Gene
- Lj1g3v0375290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0375290.1 tr|B9MVG9|B9MVG9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_677769 PE=4
SV=1,29.56,0.000000000000002,seg,NULL,CUFF.25596.1
(373 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g35890.1 557 e-159
Glyma06g19040.1 528 e-150
Glyma05g02380.1 265 5e-71
Glyma04g35890.2 218 6e-57
Glyma05g02390.1 205 5e-53
Glyma04g03730.1 135 8e-32
Glyma17g09520.1 135 1e-31
Glyma06g03820.1 133 3e-31
Glyma06g03820.2 133 4e-31
Glyma03g06760.1 80 3e-15
Glyma01g33200.1 63 5e-10
>Glyma04g35890.1
Length = 325
Score = 557 bits (1436), Expect = e-159, Method: Compositional matrix adjust.
Identities = 268/325 (82%), Positives = 296/325 (91%)
Query: 49 IHTKDKSWRFKFTNGKPKLKGRFQKQHSALFVVSEDQSEHSELEIAATVPENNNNIVQNF 108
++TKDKS + KF +G P LKGR QKQH ALFVVSEDQS++ ELE A V EN+N + ++
Sbjct: 1 MYTKDKSCQLKFIHGMPNLKGRLQKQHYALFVVSEDQSQYCELETTALVLENSNTVAEDI 60
Query: 109 SPASNSSYHLSGSDGKPGLISFYSRPYGRDNEVLLSNPEKSQNSILWFMGPAVLVASFIF 168
SPASNS +HLSGSDGKPGL+SFY+RPY RD+++LL N E+SQNSILWF+GPAVLVASFIF
Sbjct: 61 SPASNSYFHLSGSDGKPGLLSFYNRPYRRDSKILLPNSERSQNSILWFLGPAVLVASFIF 120
Query: 169 PSLYMRKLLSIIFEDSLLTDFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLDIVANNGNT 228
PSLY+RK+LSIIFEDSLLTDFLILFFTEAIFYCGV +FL+LLDH+RRP+ +DI ANN +T
Sbjct: 121 PSLYLRKVLSIIFEDSLLTDFLILFFTEAIFYCGVGVFLYLLDHVRRPLLVDIAANNSDT 180
Query: 229 LPPQMGQRISSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARY 288
LPPQ+GQR+SSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARY
Sbjct: 181 LPPQLGQRVSSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARY 240
Query: 289 RKSPSWCAIPFIFQVYRLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISSLGTLLNVLQF 348
RKSPSW AIP IFQVYRLHQLNRAAQLVTALS TVRGAEMTSHNMAI SSLGTLLNVLQF
Sbjct: 241 RKSPSWSAIPLIFQVYRLHQLNRAAQLVTALSFTVRGAEMTSHNMAINSSLGTLLNVLQF 300
Query: 349 LGVICIWSLSSFLMRFIPSASTTMQ 373
LGVICIWSLSSFLMRFIP ASTT Q
Sbjct: 301 LGVICIWSLSSFLMRFIPYASTTKQ 325
>Glyma06g19040.1
Length = 309
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/309 (83%), Positives = 282/309 (91%), Gaps = 1/309 (0%)
Query: 65 PKLKGRFQKQHSALFVVSEDQSEHSELEIAATVPENNNNIVQNFSPASNSSYHLSGSDGK 124
P LKGR QKQ +ALFVVSEDQS++ ELE A VPE++ + ++ SP SNS HLSGSDGK
Sbjct: 2 PNLKGRLQKQLNALFVVSEDQSQYCELETTALVPEDDT-VAEDISPVSNSYSHLSGSDGK 60
Query: 125 PGLISFYSRPYGRDNEVLLSNPEKSQNSILWFMGPAVLVASFIFPSLYMRKLLSIIFEDS 184
PGLISFYSRP+ RD+++LL N E+SQNSILWF+GPAVLVASFIFPSLY+RK+LSIIFEDS
Sbjct: 61 PGLISFYSRPHRRDSKILLPNSERSQNSILWFLGPAVLVASFIFPSLYLRKVLSIIFEDS 120
Query: 185 LLTDFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLDIVANNGNTLPPQMGQRISSVATLV 244
LLTDFLILFFTEAIFYCGV +FL+LLDH+RRP+ +D VANN +TLPPQ+GQR+SSVATLV
Sbjct: 121 LLTDFLILFFTEAIFYCGVGVFLYLLDHVRRPLLVDTVANNSDTLPPQLGQRVSSVATLV 180
Query: 245 LSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWCAIPFIFQVY 304
LSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSW AIP IFQVY
Sbjct: 181 LSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWSAIPLIFQVY 240
Query: 305 RLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISSLGTLLNVLQFLGVICIWSLSSFLMRF 364
RLHQLNRAAQLVTALS TVRGAEMTSHNMAI SSLGTLLNVLQFLGVICIWSLSSFLMRF
Sbjct: 241 RLHQLNRAAQLVTALSFTVRGAEMTSHNMAINSSLGTLLNVLQFLGVICIWSLSSFLMRF 300
Query: 365 IPSASTTMQ 373
IP ASTT Q
Sbjct: 301 IPYASTTKQ 309
>Glyma05g02380.1
Length = 274
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/274 (52%), Positives = 186/274 (67%), Gaps = 8/274 (2%)
Query: 106 QNFSPASNSSYHLSGSDGKPGLISFYSRPYGRDNEVLLSNPEKSQNSILWFMGPAVLVAS 165
++ P NS +H+SG +G+ ++SF +RP+ RDNEV+ SN ++++ SI M P VLVAS
Sbjct: 3 KDIFPIGNSCFHISGKNGRKPVVSFCNRPFNRDNEVISSNSKRTRISISSLMVPYVLVAS 62
Query: 166 FIFPSLYMRKLLSIIFEDSLLTDFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLDIVANN 225
F++P L + +++ +S LT FL+LFFTEA FY GV++FL +LD L RP QLD+ ANN
Sbjct: 63 FLYPQLILPEVIPKTSGNSSLTIFLLLFFTEATFYYGVAVFLLMLDRLMRPKQLDLSANN 122
Query: 226 GNTLPPQMGQRISSVATLV----LSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFA 281
NTL Q+ QR+S LV +S+ IP+VTMGL WPWTGP AT+ PYLVGIVVQF
Sbjct: 123 SNTLSLQLEQRMSFDIALVVPRLVSIAIPLVTMGLTWPWTGPVVPATIFPYLVGIVVQFK 182
Query: 282 FEQYARYRKSPSWCAIPFIFQVYRLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISSLGT 341
+EQ ARY KSPSW AIPFIF YRLHQ++RAA+ +T +S V+ S SL T
Sbjct: 183 YEQIARYWKSPSWVAIPFIFHAYRLHQIHRAAKFLTVISFQVKKGY--SKLPVARGSLST 240
Query: 342 LLNVLQFLGVICIWSLSSFLMRFI--PSASTTMQ 373
N + L VI IWS SSFLMRF+ SASTT Q
Sbjct: 241 TTNAFRILIVIWIWSFSSFLMRFLTSASASTTKQ 274
>Glyma04g35890.2
Length = 231
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 102/116 (87%), Positives = 110/116 (94%)
Query: 188 DFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLDIVANNGNTLPPQMGQRISSVATLVLSL 247
DFLILFFTEAIFYCGV +FL+LLDH+RRP+ +DI ANN +TLPPQ+GQR+SSVATLVLSL
Sbjct: 108 DFLILFFTEAIFYCGVGVFLYLLDHVRRPLLVDIAANNSDTLPPQLGQRVSSVATLVLSL 167
Query: 248 VIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWCAIPFIFQV 303
VIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSW AIP IFQV
Sbjct: 168 VIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWSAIPLIFQV 223
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 27 PASQLSLSQGVFVNQLSVAQLKIHTKDKSWRFKFTNGKPKLKGRFQKQHSALFVVSEDQS 86
P L +++ ++ V + + DKS + KF +G P LKGR QKQH ALFVVSEDQS
Sbjct: 9 PPPYLRIAKSLWAMGYEVLEGEPWCSDKSCQLKFIHGMPNLKGRLQKQHYALFVVSEDQS 68
Query: 87 EHSELEIAATVPENNNNIVQNFSPASNSSYHLSGSDGKPG-LISFYSR 133
++ ELE A V EN+N + ++ SPASNS +HLSGSDGKP LI F++
Sbjct: 69 QYCELETTALVLENSNTVAEDISPASNSYFHLSGSDGKPDFLILFFTE 116
>Glyma05g02390.1
Length = 315
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/318 (42%), Positives = 179/318 (56%), Gaps = 25/318 (7%)
Query: 63 GKPKLKGRFQKQHSALFVVSEDQSEHSELEIAATVPENNNNIVQNFSPASNSSYHLSGSD 122
G PKL+ R Q +AL V SED S S L+ A ++ NSS+H+SG+D
Sbjct: 8 GVPKLRSRLQTPQTALVVGSEDHSHISGLQRAT----------KDTFQIGNSSFHISGND 57
Query: 123 GKPGLISFYSRPYGRDNEVLLSNPEKSQNSILWFMGPAVLVASFIFPSLYMRKLLSIIFE 182
GKP +SF +RP+ RDNEV+ S+ E +N++ WF+GP VLVASF FP + + K++S IF
Sbjct: 58 GKPA-VSFCNRPFSRDNEVISSDSEWIRNTLSWFIGPVVLVASFCFPLICLPKMISNIFG 116
Query: 183 DSLLTDFLILFFTEAIFYCGVSLFLFLLDH------LRRPVQLDIVANNGNTLPPQMGQR 236
++ I + + S+FL L+ R L + +T P Q
Sbjct: 117 STVSKACNI----HDLAFVRCSVFLALISPSPPIILTRSNFLLWSCCFSSSTRPFNETQT 172
Query: 237 ISSVATLV-LSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWC 295
S L + IPMVT+GL WPW G TLAPY+VG+ VQ AFE A Y KSPSW
Sbjct: 173 TGSFCKQKQLGITIPMVTLGLTWPWNGHVIPVTLAPYMVGVFVQSAFEMLALYWKSPSWP 232
Query: 296 AIPFIFQVYRLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISS--LGTLLNVLQFLGVIC 353
AIPFIF VYRLHQ+++A +T L + AE + + S LG L VLQ L VI
Sbjct: 233 AIPFIFHVYRLHQIHKATLSLTFLLYDLAEAEKVYSKLPLTPSTWLG-LTTVLQILLVIW 291
Query: 354 IWSLSSFLMRFIPSASTT 371
IWS SSFL++FI SAS+T
Sbjct: 292 IWSFSSFLVKFIRSASST 309
>Glyma04g03730.1
Length = 295
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 20/308 (6%)
Query: 65 PKLKG--RFQKQHSALFVVSEDQSEHSELEIAATVPENNNNI-VQNFSPASNSSYHLSGS 121
P L G +FQ+ L V S D + + LE+ P+ ++++ V F+ A +H
Sbjct: 1 PSLLGLSKFQR----LLVHSSDSNLNGGLEVH---PKQSSSVPVTTFNGAE--PFH---- 47
Query: 122 DGKPGLISFYSRPYGRDNE-VLLSNP-EKSQNSILWFMGPAVLVASFIFPSLYMRKLLSI 179
GK G +SF + E L S+P E S LW + PA +AS I P ++ ++
Sbjct: 48 -GKSGSVSFCGLTHQSVEEGKLESSPFEGKGGSFLWVLAPAAFIASLILPQFFVDNVVEA 106
Query: 180 IFEDSLLTDFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLDIVANNGNTLPPQMGQRISS 239
+ +L D + +F E +FY G++ FL + D ++RP L + + G S+
Sbjct: 107 FLNNVILIDIVTIFSHEVLFYIGLATFLHVTDCVQRP-YLQYSSKRWGLITGLRGYLFSA 165
Query: 240 VATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWCAIPF 299
T+ L ++ P++ + + W AA + P+LVG V Q AFE+ R S W +P
Sbjct: 166 FFTMGLKIIAPLILLFVTWSAIRIAAFVAITPFLVGCVAQIAFEKALDNRGSSCWPLVPV 225
Query: 300 IFQVYRLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISSLGTLLNVLQFLGVICIWSLSS 359
IF+VYRL+QL +AA L +++G + +L +L Q LG++C+WSL +
Sbjct: 226 IFEVYRLYQLTKAANFAEKLLFSMKGLPAGPELVERSGALFAMLITFQVLGIVCLWSLMT 285
Query: 360 FLMRFIPS 367
FL+R PS
Sbjct: 286 FLLRLFPS 293
>Glyma17g09520.1
Length = 109
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/109 (63%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Query: 198 IFYCGVSLFLFLLDHLRRPVQLDIVANNGNTLPPQMGQRISSVATLV----LSLVIPMVT 253
IFYCGV++FL LLD L RP QLD ANN +T Q+ QRIS LV LS+ IP+ T
Sbjct: 1 IFYCGVAVFLLLLDRLMRPKQLDPSANNSDTPSLQLEQRISFDTALVMLRLLSISIPVFT 60
Query: 254 MGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWCAIPFIFQ 302
MGL WPW GP ATL PYLVGI+VQF +EQ ARY KSPSW AIPFIF
Sbjct: 61 MGLTWPWIGPVVPATLVPYLVGILVQFKYEQIARYWKSPSWAAIPFIFH 109
>Glyma06g03820.1
Length = 356
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 33/327 (10%)
Query: 57 RFKFTNGKPKLKGRFQK-------QHSALFVVSEDQSEHSELEI----AATVPENNNNIV 105
RF+F N LK ++ + L V + D + + LE+ +++VP N V
Sbjct: 40 RFRFGNPSKCLKWVIKETSLLGLSESKKLLVHASDSNLNGGLEVHPKQSSSVPVTTFNGV 99
Query: 106 QNFSPASNSS-----YHLSGSDGKPGLISFYSRPYGRDNEVLLSNPEKSQNSILWFMGPA 160
+ F S S H S +GK S P+G S LW + PA
Sbjct: 100 EPFHGKSGSVSFCGLTHQSVEEGK-----LESSPFGVKG-----------GSFLWVLAPA 143
Query: 161 VLVASFIFPSLYMRKLLSIIFEDSLLTDFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLD 220
+AS P ++ ++ + +L D + F E +FY G++ FL + D ++RP L
Sbjct: 144 AFIASLTLPQFFVDNVVEAFLNNVMLIDIVTTFSHEVLFYIGLATFLHVTDRVQRP-YLQ 202
Query: 221 IVANNGNTLPPQMGQRISSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQF 280
+ + G S+ T+ L ++ P++ + + W AA + P+LVG V Q
Sbjct: 203 YSSKRWGLITGLRGYLFSAFFTMGLKIIAPLILLFVTWSAIRIAAFVAITPFLVGCVAQM 262
Query: 281 AFEQYARYRKSPSWCAIPFIFQVYRLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISSLG 340
AFE+ R S W +P IF+VYRL+QL +AA L +++G + +L
Sbjct: 263 AFEKALDNRGSSCWPLVPAIFEVYRLYQLTKAANFAEKLLFSMKGLPASPELAERSGALF 322
Query: 341 TLLNVLQFLGVICIWSLSSFLMRFIPS 367
+L Q LG++C+WSL +FL+R PS
Sbjct: 323 AMLITFQVLGIVCLWSLMTFLLRLFPS 349
>Glyma06g03820.2
Length = 337
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 150/327 (45%), Gaps = 33/327 (10%)
Query: 57 RFKFTNGKPKLKGRFQK-------QHSALFVVSEDQSEHSELEI----AATVPENNNNIV 105
RF+F N LK ++ + L V + D + + LE+ +++VP N V
Sbjct: 21 RFRFGNPSKCLKWVIKETSLLGLSESKKLLVHASDSNLNGGLEVHPKQSSSVPVTTFNGV 80
Query: 106 QNFSPASNSS-----YHLSGSDGKPGLISFYSRPYGRDNEVLLSNPEKSQNSILWFMGPA 160
+ F S S H S +GK S P+G S LW + PA
Sbjct: 81 EPFHGKSGSVSFCGLTHQSVEEGK-----LESSPFGVKG-----------GSFLWVLAPA 124
Query: 161 VLVASFIFPSLYMRKLLSIIFEDSLLTDFLILFFTEAIFYCGVSLFLFLLDHLRRPVQLD 220
+AS P ++ ++ + +L D + F E +FY G++ FL + D ++RP L
Sbjct: 125 AFIASLTLPQFFVDNVVEAFLNNVMLIDIVTTFSHEVLFYIGLATFLHVTDRVQRP-YLQ 183
Query: 221 IVANNGNTLPPQMGQRISSVATLVLSLVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQF 280
+ + G S+ T+ L ++ P++ + + W AA + P+LVG V Q
Sbjct: 184 YSSKRWGLITGLRGYLFSAFFTMGLKIIAPLILLFVTWSAIRIAAFVAITPFLVGCVAQM 243
Query: 281 AFEQYARYRKSPSWCAIPFIFQVYRLHQLNRAAQLVTALSSTVRGAEMTSHNMAIISSLG 340
AFE+ R S W +P IF+VYRL+QL +AA L +++G + +L
Sbjct: 244 AFEKALDNRGSSCWPLVPAIFEVYRLYQLTKAANFAEKLLFSMKGLPASPELAERSGALF 303
Query: 341 TLLNVLQFLGVICIWSLSSFLMRFIPS 367
+L Q LG++C+WSL +FL+R PS
Sbjct: 304 AMLITFQVLGIVCLWSLMTFLLRLFPS 330
>Glyma03g06760.1
Length = 56
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 41/56 (73%)
Query: 247 LVIPMVTMGLVWPWTGPAASATLAPYLVGIVVQFAFEQYARYRKSPSWCAIPFIFQ 302
+ I +V MGL W WTGP AT PYLVGIVVQF +EQ ARY KSPSW AIPFIF
Sbjct: 1 IAISLVIMGLTWLWTGPLVPATFFPYLVGIVVQFKYEQIARYWKSPSWVAIPFIFH 56
>Glyma01g33200.1
Length = 343
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 154 LWFMGPAVLVASFIFPSLYMRKLLSIIFEDSLLTDFLILFFTEAIFYCGVSLFLFLLDHL 213
LW +GP++L+A+ + P+L++ +S IF + + L L + IF G +LFL + D
Sbjct: 124 LWLLGPSILLATGMVPTLWLP--ISSIFLGTNIASLLSLIGLDCIFNLGATLFLLMADAC 181
Query: 214 RRPVQLDIVANNGNTLPPQMGQRISSVATLVLSLVIPMVTM-----GLVWPWTGPAASAT 268
RP L + + P Q + VATL +IP++ M G + P
Sbjct: 182 SRPKSL---TQDCKSKAPFSYQFWNIVATLT-GFIIPLLVMFGSQKGFLQP------QLP 231
Query: 269 LAPYLVGIV-------VQFAFEQYARYRKSPSWCAIPFIFQVYRLHQLNRAAQLVTALSS 321
P+ V + VQF E + +SP W P I++ YR+ QL R +L LS+
Sbjct: 232 FIPFAVLLGPYLLLLSVQFLTEMLTWHWQSPVWLVTPVIYESYRVLQLMRGLKLGVELSA 291
Query: 322 ------TVRG 325
T+RG
Sbjct: 292 PAWVMHTIRG 301