Miyakogusa Predicted Gene

Lj1g3v0342030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0342030.1 Non Chatacterized Hit- tr|D7SHM6|D7SHM6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.27,0.000000000008,
,gene.Ljchr1_pseudomol_20120830.path1.gene858.1
         (111 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g35940.1                                                       147   2e-36

>Glyma04g35940.1 
          Length = 471

 Score =  147 bits (372), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/115 (64%), Positives = 87/115 (75%), Gaps = 5/115 (4%)

Query: 1   MILGSVGKIASDMKHVHALEGNHDCIVDMIKALEDPRFSKLCMQVGRTYLMIHEQTHLSS 60
           M LG + KIAS+MK +HALEGNHD +VDMI+A EDPRFSKLCM VGRTY+MI EQ++LS 
Sbjct: 358 MNLGCLRKIASEMKSMHALEGNHDYVVDMIEAFEDPRFSKLCMHVGRTYIMIQEQSYLSL 417

Query: 61  DLESTSMVDLVGLNVLKACLPSQVYTPEDLIKFIDTAVS----CCYVESSVLHVA 111
           D E TSM DLV LN +K+   SQ+YTPEDLIKFID  V+    C   E  +LHVA
Sbjct: 418 DFECTSMCDLVDLNDMKS-YTSQIYTPEDLIKFIDNGVAELGDCFIEEQPILHVA 471