Miyakogusa Predicted Gene
- Lj1g3v0330950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0330950.1 Non Chatacterized Hit- tr|H2B2I1|H2B2I1_BRASY
Uncharacterized protein OS=Brachypodium sylvaticum
GN=,49,2e-16,seg,NULL; C2H2-TYPE ZN FINGER-CONTAINING PROTEIN,NULL;
RNA-BINDING PROTEIN,NULL; G-patch,G-patch dom,CUFF.25792.1
(508 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma04g36010.1 708 0.0
Glyma06g18900.1 345 7e-95
Glyma16g18030.1 54 5e-07
Glyma16g18030.2 54 6e-07
Glyma08g35510.1 50 4e-06
>Glyma04g36010.1
Length = 508
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/512 (71%), Positives = 406/512 (79%), Gaps = 10/512 (1%)
Query: 1 MDSDSDHLENSDPGFVWDENSQLYFHASTGFYHDPNAGWYYSSSDGVYYKFEDGKYVPLG 60
MD+DS++ ENSD FVWDENSQLYFHAS+GFYHDPNAGWYYS+ DG YYKFEDG YV LG
Sbjct: 1 MDADSEYRENSDSSFVWDENSQLYFHASSGFYHDPNAGWYYSNKDGAYYKFEDGNYVLLG 60
Query: 61 SNEDDCEETVQCKETTPENPQQIC-GNNNGDSTSFLEREFDTGQHTGTLVDEAFDDDAMN 119
+ EDD E QCKETT ENPQQI GNNN D SFLE +F+T Q GTL DEA D N
Sbjct: 61 TKEDDNVEMYQCKETTKENPQQIYDGNNNEDHPSFLESKFETNQQIGTLADEA-PADTPN 119
Query: 120 SMSSPACENXXXXXSEWLEDTLIELYLSGYNNTAVSAADTAAVPFETDSEYYS-----YH 174
S+SSP CE+ SEWLEDTLI+LYLSGY N VS AD VPFETD Y S Y
Sbjct: 120 SVSSPTCEDPPPPPSEWLEDTLIDLYLSGYKNIEVSEADAVTVPFETDDRYNSLAADAYS 179
Query: 175 NTDEVEREWIPGPVDDNVIADNEGTVDESVAYSDTYELEEGEWIPDSEDENGIADRSPID 234
T EVE EWI P D+N +ADN TVDE + YS+TYELEEGEWIPD EDE GIADRS ID
Sbjct: 180 KTYEVEGEWILEPGDENGLADNRSTVDEGIPYSNTYELEEGEWIPDMEDEYGIADRSTID 239
Query: 235 EGILLDEENWRAQYGQVTESGNDLVSEFSIVDLWDWEMVRGSKKDGKDNAARLVGRLVKQ 294
E I LDEE WRAQYGQVTESG DLVSE IVDLWDWEMV GSK+DGKD ARLVGRLVK
Sbjct: 240 EAISLDEEKWRAQYGQVTESGKDLVSEVPIVDLWDWEMVTGSKRDGKDKMARLVGRLVKP 299
Query: 295 SAKPHPSIRSGRGKLRSAPICEVHLDLVRVKTGQVYKLRNPSASYVASISTYNSANPTKD 354
SAK HPSI GKLRSAPICE HLDLVRVKTGQ+Y+LRNPSA YVAS+STY+S+NPT+
Sbjct: 300 SAKQHPSIPFSGGKLRSAPICEAHLDLVRVKTGQLYRLRNPSAKYVASLSTYDSSNPTEH 359
Query: 355 WDFPQLSSNRNITRFSKSSEGTGTASTSDETPVEKDLSVLSTQLSASKQMIKQQYRDRAA 414
WDFPQLS NR I R SKSS +AS DETP+EKDLS L +QLSASK+ IK QYRDRAA
Sbjct: 360 WDFPQLSPNRKIKRHSKSS--ESSASALDETPIEKDLSALPSQLSASKK-IKHQYRDRAA 416
Query: 415 ERRILHGGFGVDPGQKNHAVRDDTTSSPDDYCPEEAASEALQMSFGAGSYARKLLENMGW 474
ERRILHGGFG+ PGQKN + +T SSP D CP+EA +EAL+MSFGAGSYARKLL++MGW
Sbjct: 417 ERRILHGGFGMGPGQKNLSDIYNTPSSPVDDCPQEATAEALEMSFGAGSYARKLLKSMGW 476
Query: 475 KEGEGLGNSTKGLVEPIQPVGNIGSAGLGWPR 506
KEGEGLG+STKGLVEPIQPVGN+G++GLGW R
Sbjct: 477 KEGEGLGSSTKGLVEPIQPVGNVGTSGLGWSR 508
>Glyma06g18900.1
Length = 324
Score = 345 bits (885), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 200/316 (63%), Positives = 229/316 (72%), Gaps = 16/316 (5%)
Query: 173 YHNTDEVEREWIPGPVDDNVIADN-EGTVDESVAYSDTYELEEGEWIPDSEDENGIADRS 231
Y T EVE EWIP P D+N +AD+ TVDE + YS+TYELEEGEWIPD EDE GIADR+
Sbjct: 1 YSKTYEVEGEWIPEPGDENGLADDIRSTVDEGIPYSNTYELEEGEWIPDMEDEYGIADRT 60
Query: 232 PIDEGILLDEENWRAQYGQVTESGNDLVSEFSIVDLWDWEMVRGSKKDGKDNAARLVGRL 291
ILLDEE WRAQYGQV ESG DLVSE +VDLWDWEMV GSK+DGKD ARLVGRL
Sbjct: 61 -----ILLDEEKWRAQYGQVAESGKDLVSEVPVVDLWDWEMVTGSKRDGKDKVARLVGRL 115
Query: 292 VKQSAKPHPSIRSGRGKLRSAPICEVHLDLVRVKTGQVYKLRNPS----ASYVASISTYN 347
K SAK PSI S GKLRSAPI V ++R Y+ A V S+STY+
Sbjct: 116 AKPSAKQLPSIPSRGGKLRSAPILNVFFHVMRC---NYYEDECTDCEILAQNVTSLSTYD 172
Query: 348 SANPTKDWDFPQLSSNRNITRFSKSSEGTGTASTSDETPVEKDLSVLSTQLSASKQMIKQ 407
S+NPT+ WDFPQLS R IT SKSSE + +AS ETP+EKDLS +QLSASK+ IK
Sbjct: 173 SSNPTEHWDFPQLSPYRKITHHSKSSESSASASV--ETPIEKDLSASPSQLSASKK-IKH 229
Query: 408 QYRDRAAERRILHGGFGVDPGQKNHAVRDDTTSSPDDYCPEEAASEALQMSFGAGSYARK 467
QYRDR AERRILHGGFG+ PGQKN +T SSP D C +EA +EAL++SFGAGS ARK
Sbjct: 230 QYRDRTAERRILHGGFGMGPGQKNLPDIYNTPSSPVDDCLQEATAEALEVSFGAGSCARK 289
Query: 468 LLENMGWKEGEGLGNS 483
LL++MGWKEGEGLG +
Sbjct: 290 LLKSMGWKEGEGLGGT 305
>Glyma16g18030.1
Length = 1066
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 14 GFVWDENSQLYFHASTGFYHDPNAGWYYSSSDGVYYKF--EDGKYVPLGSNEDDCEETVQ 71
GFVWDE S Y+ A++GFY+D N G YY ++G++Y + + +Y+P C + Q
Sbjct: 613 GFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIP-------CTDQNQ 665
Query: 72 CKETTPENPQQI 83
K + P ++
Sbjct: 666 NKASNESEPSKV 677
>Glyma16g18030.2
Length = 1029
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 9/72 (12%)
Query: 14 GFVWDENSQLYFHASTGFYHDPNAGWYYSSSDGVYYKF--EDGKYVPLGSNEDDCEETVQ 71
GFVWDE S Y+ A++GFY+D N G YY ++G++Y + + +Y+P C + Q
Sbjct: 613 GFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIP-------CTDQNQ 665
Query: 72 CKETTPENPQQI 83
K + P ++
Sbjct: 666 NKASNESEPSKV 677
>Glyma08g35510.1
Length = 1057
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%)
Query: 14 GFVWDENSQLYFHASTGFYHDPNAGWYYSSSDGVYYKFE 52
GFVWDE S Y+ A++GFY+D N G YY ++G++Y ++
Sbjct: 603 GFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYD 641