Miyakogusa Predicted Gene

Lj1g3v0318250.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0318250.2 tr|Q9LYD2|Q9LYD2_ARATH At5g11600 OS=Arabidopsis
thaliana GN=F15N18_190 PE=2 SV=1,52.69,2e-19, ,CUFF.25528.2
         (98 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g27530.1                                                       110   5e-25
Glyma14g22750.1                                                       109   5e-25
Glyma04g08890.1                                                       108   2e-24
Glyma06g08980.1                                                        89   2e-18
Glyma06g02670.1                                                        57   6e-09
Glyma04g02630.1                                                        56   8e-09

>Glyma17g27530.1 
          Length = 198

 Score =  110 bits (274), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 61/71 (85%), Gaps = 7/71 (9%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERAKKAFDKKQRRQKELRTGTPV--- 69
           QKEPLR+FYESLSKQIP SEMAEFWLM+HGLL  ERAK+AF+KKQR+QK+LRTGTPV   
Sbjct: 94  QKEPLRVFYESLSKQIPTSEMAEFWLMEHGLLSPERAKRAFEKKQRKQKQLRTGTPVKPS 153

Query: 70  ----KTETSQK 76
               KTETSQK
Sbjct: 154 KPATKTETSQK 164


>Glyma14g22750.1 
          Length = 199

 Score =  109 bits (273), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 55/72 (76%), Positives = 61/72 (84%), Gaps = 8/72 (11%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERAKKAFDKKQRRQKELRTGTPV--- 69
           QKEPLR+FYESLSKQIP SEMAEFWLM+HGLL  ERAK+AF+KKQR+QK+LRTGTPV   
Sbjct: 94  QKEPLRVFYESLSKQIPTSEMAEFWLMEHGLLSPERAKRAFEKKQRKQKQLRTGTPVKSS 153

Query: 70  -----KTETSQK 76
                KTETSQK
Sbjct: 154 RQPETKTETSQK 165


>Glyma04g08890.1 
          Length = 208

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/71 (77%), Positives = 60/71 (84%), Gaps = 7/71 (9%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERAKKAFDKKQRRQKELRTGTPV--- 69
           QKEPLRIFYESLSKQIP SEMAEFWLM+HGLL  E+AKKAF+K+QR+QKELRTGTPV   
Sbjct: 102 QKEPLRIFYESLSKQIPTSEMAEFWLMEHGLLSPEKAKKAFEKRQRKQKELRTGTPVKLS 161

Query: 70  ----KTETSQK 76
               KT TSQK
Sbjct: 162 KPPTKTATSQK 172


>Glyma06g08980.1 
          Length = 207

 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/58 (86%), Positives = 55/58 (94%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERAKKAFDKKQRRQKELRTGTPVK 70
           QKEPLRIFYESLSKQ+P SEMAEFWLM+HGLL  E+AKKAF+KKQR+QKELRTGTPVK
Sbjct: 102 QKEPLRIFYESLSKQMPTSEMAEFWLMEHGLLSPEKAKKAFEKKQRKQKELRTGTPVK 159


>Glyma06g02670.1 
          Length = 236

 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 23/37 (62%), Positives = 31/37 (83%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSERA 49
           +K+PLRIFYE+L KQ+P SEM++ WLM+ GLLP + A
Sbjct: 104 EKDPLRIFYETLFKQVPSSEMSQIWLMESGLLPKDLA 140


>Glyma04g02630.1 
          Length = 225

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 22/35 (62%), Positives = 30/35 (85%)

Query: 13  QKEPLRIFYESLSKQIPPSEMAEFWLMQHGLLPSE 47
           +K+PLRIFYE+L KQ+P SEM++ WLM+ GLLP +
Sbjct: 95  EKDPLRIFYETLFKQVPSSEMSQIWLMESGLLPKD 129