Miyakogusa Predicted Gene

Lj1g3v0318200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0318200.1 tr|A2A1E8|A2A1E8_LOTJA Nucleoporin OS=Lotus
japonicus GN=NUP85 PE=2 SV=1,99.86,0,SUBFAMILY NOT NAMED,NULL; FROUNT
PROTEIN-RELATED,NULL; Nucleopor_Nup85,Nucleoporin Nup85-like;
seg,N,CUFF.25538.1
         (711 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g27490.1                                                      1157   0.0  

>Glyma17g27490.1 
          Length = 698

 Score = 1157 bits (2994), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/711 (79%), Positives = 617/711 (86%), Gaps = 13/711 (1%)

Query: 1   MPSDTVGNGVLVPFSGEGSDSVAVYPLNHGLSLPISRVAISWSRGNSLRVSLFAEPSATS 60
           MPSDTVGN  LVPF+G+     AVYPL+HGL+ PISR++ISW+RG+SLR+SLFA      
Sbjct: 1   MPSDTVGNVALVPFTGDSPP--AVYPLHHGLAPPISRLSISWARGSSLRLSLFA------ 52

Query: 61  PDSQASGAKVVEVKLSGEDPEISDSNWRRIAYGSVTPFALLQXXXXXXXXXXXXXXXYHV 120
                + AKVVEVKL+GED EI D++WRRIAYGSV PFALLQ               Y  
Sbjct: 53  ----GAAAKVVEVKLAGEDSEIPDAHWRRIAYGSVAPFALLQSRRSSLSALLKTPSPYRS 108

Query: 121 DWWEHVLEYSKDIASLLGGPKLSPGPIIEDPNAIATKCEEPTCLKAAWELLEMFYVDKRS 180
           DWWEHVL+YSK+I SLLGGPKL   PIIEDPN IA + EEPT LKAAWEL+E+FYVDK+S
Sbjct: 109 DWWEHVLQYSKEIGSLLGGPKLPASPIIEDPNVIAKRGEEPTSLKAAWELIEIFYVDKQS 168

Query: 181 QAWLPERLVDWLADFDSLFTSTHETIHGKLVNFQKELVNIQVIEDDPRYWEVMSSALSVG 240
           QAWLPERLVDWLAD+ SLFTSTHETIHGKLV+FQKELVNIQVIE+DPRYW+++SSALSVG
Sbjct: 169 QAWLPERLVDWLADYASLFTSTHETIHGKLVDFQKELVNIQVIEEDPRYWDLLSSALSVG 228

Query: 241 WLDIVVKMLRLHGSYQLDQLSSRERENGLVEVVAVLISKMPRLRPESAVENLGECFKSKP 300
           WLDIVVKMLRLHGSYQLDQLS+RE ENGLVE VAVLISKMPR+RPES V  LGEC+KSKP
Sbjct: 229 WLDIVVKMLRLHGSYQLDQLSNRELENGLVEAVAVLISKMPRMRPES-VGKLGECYKSKP 287

Query: 301 DFIKAWEKWRSQITKLDCSPFWIQCDNQQTCDGLRNLLQIMLGNTESLCTATCHWIELYV 360
           DFIKAWEKWRSQITKLDCS FWIQCDNQQT +GLRNLLQIMLGNTESLC ATC+WIELY+
Sbjct: 288 DFIKAWEKWRSQITKLDCSRFWIQCDNQQTREGLRNLLQIMLGNTESLCMATCYWIELYI 347

Query: 361 SHFLYIRPFTTGIESMYNLAQKCMQLKPPSSIHKLTGLMIGILGENTEVVLAECSREFGP 420
           SHFLYIRPFT GIESMYNLAQKC+QLKP SS H+L+ LMIGIL ENTEVVLAECSREFGP
Sbjct: 348 SHFLYIRPFTMGIESMYNLAQKCIQLKPRSSTHRLSVLMIGILEENTEVVLAECSREFGP 407

Query: 421 WMVAHAVELLTAGSEQAEVLLHDEHYNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLT 480
           W+VAHA+ELLTAGSEQAE+LLH+E YNLGGISIVELHRL YAQ+LSSHALTWQIAPIYLT
Sbjct: 408 WLVAHAIELLTAGSEQAEILLHEERYNLGGISIVELHRLVYAQILSSHALTWQIAPIYLT 467

Query: 481 SCMKQGMGLLENLLYRQSVQHNDTLLKNIEICRLYELDHISSKIMKVAGVFHWKHGRKGA 540
           SCMKQGMGLLENLLYRQS QHND LLKNIEICRLYELDHISS IMK+AGV HWKHG KGA
Sbjct: 468 SCMKQGMGLLENLLYRQSAQHNDVLLKNIEICRLYELDHISSNIMKIAGVHHWKHGHKGA 527

Query: 541 GVFWLQQAQDASCLGRIALQLFDAVGKSISDESFKQWEGIIELLGSESKPAGGLEFLHKY 600
           GVFWLQQAQDASCL +IA QLFD+VGKSISDESFKQWEG+IELLGSESKPAGGLEFLHKY
Sbjct: 528 GVFWLQQAQDASCLDKIAQQLFDSVGKSISDESFKQWEGMIELLGSESKPAGGLEFLHKY 587

Query: 601 RDFKKSLQQVSGGKSTEAARQAVGSLILLMKNPSTPPRFWLPLLYDSLKLLNWKDCXXXX 660
           RDFKKSLQ+VS GKST+AARQAVGSLILLMKNPSTP RFWLPLLYDSLKLLNW+DC    
Sbjct: 588 RDFKKSLQKVSSGKSTDAARQAVGSLILLMKNPSTPQRFWLPLLYDSLKLLNWQDCPLLS 647

Query: 661 XXXXXXXXXXXXXXXXARLRPHFTEPSLPPEALSSVRLALATNLGRAILDE 711
                           A+LRPH TEPSLPP+ALSS+RLALATNLG+AILDE
Sbjct: 648 VSETNLLLNKLHELSLAKLRPHHTEPSLPPDALSSIRLALATNLGQAILDE 698