Miyakogusa Predicted Gene

Lj1g3v0307940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0307940.1 tr|G7J4A8|G7J4A8_MEDTR Thyroid
receptor-interacting protein OS=Medicago truncatula GN=MTR_3g076930
P,89.47,0,AAA,ATPase, AAA-type, core; P-loop containing nucleoside
triphosphate hydrolases,NULL; no descriptio,CUFF.25509.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g18700.1                                                       207   3e-54
Glyma04g36240.1                                                       206   4e-54
Glyma02g13160.1                                                        54   3e-08
Glyma03g27900.1                                                        49   1e-06
Glyma11g20060.1                                                        47   8e-06

>Glyma06g18700.1 
          Length = 448

 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/114 (90%), Positives = 108/114 (94%)

Query: 1   MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTT 60
           MVEEE NLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ+DKLKS+PNVIILTT
Sbjct: 250 MVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTT 309

Query: 61  SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQVTAN 114
           SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSC+QEL+R+GIL S Q   N
Sbjct: 310 SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRTGILTSLQDCKN 363


>Glyma04g36240.1 
          Length = 420

 Score =  206 bits (525), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 102/114 (89%), Positives = 108/114 (94%)

Query: 1   MVEEEGNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTT 60
           MVEEE NLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQ+DKLKS+PNVIILTT
Sbjct: 222 MVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTT 281

Query: 61  SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCVQELIRSGILASFQVTAN 114
           SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSC+QE++R+GIL S Q   N
Sbjct: 282 SNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQEMMRTGILTSLQDCKN 335


>Glyma02g13160.1 
          Length = 618

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 5/90 (5%)

Query: 11  VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
           +  DE + +AA R  + S S  +   R+++ LLT++D L+ A  +++L  +N   AID A
Sbjct: 392 IFFDEADVVAAKRGDSSSNSA-TVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAA 450

Query: 71  FV--DRADIKAYVGPPTLQARYEILRSCVQ 98
            +   R D+  YV PP L+AR+EIL  CV 
Sbjct: 451 LMRPGRFDLVLYVPPPDLEARHEIL--CVH 478


>Glyma03g27900.1 
          Length = 969

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 4/86 (4%)

Query: 11  VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
           V  DE++SLA  R     G   SD  RV++ LL +LD L    NV ++  +N    ID A
Sbjct: 781 VFFDEIDSLAVTRGKESDGVSVSD--RVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPA 838

Query: 71  FV--DRADIKAYVGPPTLQARYEILR 94
            +   R D   YVGPP    R EI R
Sbjct: 839 LLRPGRFDRLLYVGPPNEVDREEIFR 864


>Glyma11g20060.1 
          Length = 806

 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 8/123 (6%)

Query: 11  VLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQLDKLKSAPNVIILTTSNITAAIDIA 70
           +  DE++S+A  R ++   +    + RV+N LLT++D + +   V I+  +N    ID A
Sbjct: 578 LFFDELDSIATQRGSSGGDAG-GAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSA 636

Query: 71  FV--DRADIKAYVGPPTLQARYEILRSC-----VQELIRSGILASFQVTANNTSLVRIVR 123
            +   R D   Y+  P  ++RY+I ++C     V + +  G LA +    +   +  I +
Sbjct: 637 LLRPGRLDQLIYIPLPDQESRYQIFKACMKKSPVSKDVNLGALAEYTKGFSGADITEICQ 696

Query: 124 MSC 126
            +C
Sbjct: 697 RAC 699