Miyakogusa Predicted Gene

Lj1g3v0296900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0296900.1 Non Chatacterized Hit- tr|J3M389|J3M389_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB05G1,31.29,0.000000000003,coiled-coil,NULL,CUFF.25533.1
         (268 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g18630.1                                                       219   2e-57
Glyma04g36260.1                                                       219   3e-57
Glyma03g40550.1                                                        51   2e-06

>Glyma06g18630.1 
          Length = 567

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/281 (48%), Positives = 157/281 (55%), Gaps = 87/281 (30%)

Query: 1   MVEQLELTDQDVSAIANMIDSEIQYHIPSWNPSETPV------------SRHEASPMAND 48
           MVE+LELTDQDV+ IA MIDSEI+YHIPSWN SETPV            +R EASPM  D
Sbjct: 355 MVEELELTDQDVTTIAGMIDSEIRYHIPSWNFSETPVDFNHQDSSYTSETRPEASPMKID 414

Query: 49  SVTSTGSLALEILPSGRKYWSDSPRALGGSSPLRHGPSNLSNEGDVSAREGSLTESGTDK 108
           SV + GSLALEILPSGRKYWSDSPR  GG+SP RH  S LSNE  V++ E          
Sbjct: 415 SVVAPGSLALEILPSGRKYWSDSPRGFGGNSPSRHMTSILSNEAGVNSEE---------- 464

Query: 109 ECDGAADSPFSERSI-ASECLERTSEKSSPEELQHVASDLSNEGDVSAKEGSMAESSADK 167
                 D+P +   I A +C++ T E+                                 
Sbjct: 465 ------DNPTANGGISADDCVDGTIEQ--------------------------------- 485

Query: 168 ECDGAADSPFSERSVASECLERTSEKSSPEEISGSLEDSEIESIDKIAKDLECLLVMQRV 227
           ECD  ADSP SE+S                         E+E I++I   LE LLV QR 
Sbjct: 486 ECDEIADSPSSEKS-------------------------EMEYINQITTKLENLLVKQRE 520

Query: 228 ELDELKRKHKLAVSDLLKELSPEMCQKVQNICNLEIPDSEM 268
           ELDELKRKHKLAVSDLL E+ PEMCQKV NICNL++PDSEM
Sbjct: 521 ELDELKRKHKLAVSDLLMEIPPEMCQKVLNICNLQMPDSEM 561


>Glyma04g36260.1 
          Length = 569

 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 161/291 (55%), Gaps = 85/291 (29%)

Query: 1   MVEQLELTDQDVSAIANMIDSEIQYHIPSWNPSETPV------------SRHEASPMAND 48
           MVE+LELTDQDV+ IA MIDSEI+YHIPSWN SETP+            +R E SPM ND
Sbjct: 335 MVEELELTDQDVTTIARMIDSEIRYHIPSWNFSETPLDINHQDSSCTSETRPETSPMKND 394

Query: 49  SVTSTGSLALEILPSGRKYWSDSPRALGGSSPLRHGPSNLSNEGDVSAREGSLTESG--- 105
           S+ S GSLALEILPSGR+YWSDSPR +GG+SP +H  S LSNE  V+A EG+L  +G   
Sbjct: 395 SIASPGSLALEILPSGRRYWSDSPRGVGGNSPSQHFTSILSNETGVNAEEGNLITNGDIS 454

Query: 106 --------TDKECDGAADSPFSERSIASECLERTSEKSSPEELQHVASDLSNEGDVSAKE 157
                    ++ECD  ADSP SE SI S     TSEKSS +E+     D           
Sbjct: 455 ANDCVDGTAERECDEIADSPSSEISITSGA---TSEKSSQKEISRSLKD----------- 500

Query: 158 GSMAESSADKECDGAADSPFSERSVASECLERTSEKSSPEEISGSLEDSEIESIDKIAKD 217
                                            SE     +I+  LE+            
Sbjct: 501 ---------------------------------SETEYINQITTKLEN------------ 515

Query: 218 LECLLVMQRVELDELKRKHKLAVSDLLKELSPEMCQKVQNICNLEIPDSEM 268
              LLV QR ELDELKRKHKLAVSDLL E+ PEMCQKV N+CNL++PD EM
Sbjct: 516 ---LLVKQREELDELKRKHKLAVSDLLMEIPPEMCQKVLNVCNLQMPDGEM 563


>Glyma03g40550.1 
          Length = 629

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 28/162 (17%)

Query: 1   MVEQLELTDQDVSAIANMIDSEIQYHIPSWNPSET--PVSRHEASPMAND--SVTSTGSL 56
           MV +L++TDQDV++IA+MID EI   +P W P       + H  +   ++  S+ ++G  
Sbjct: 301 MVAELDITDQDVTSIADMIDGEIASLVPEWKPGPGIEETNHHLNNFFCHNCVSIHTSGGN 360

Query: 57  ALEILPSGRKYWSDSPRALGGSSPL----RHGPSNLSNEGDVSAREGSLTESGTDKECDG 112
            +E L         S    G +S L    RHG +++          G   E     ECD 
Sbjct: 361 VMEFL---------SHNQCGKNSQLPQCCRHGCTSM---------HGRFEEITFPSECDN 402

Query: 113 AADSPFSERSIASECLERTSEKSSPE--ELQHVASDLSNEGD 152
                   +S  S+CL+R    +  E  EL  V SD S+ G+
Sbjct: 403 HVRGDAPIKSSQSDCLQRQESWNHHESCELSPVESDESHSGE 444