Miyakogusa Predicted Gene
- Lj1g3v0268770.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0268770.1 tr|G7KHI2|G7KHI2_MEDTR MADS-box transcription
factor OS=Medicago truncatula GN=MTR_6g005440 PE=3
SV=,38.06,1e-16,coiled-coil,NULL,CUFF.25450.1
(356 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g07170.1 134 1e-31
Glyma13g07720.1 126 3e-29
Glyma08g22700.1 124 1e-28
Glyma19g06510.1 123 3e-28
Glyma15g23350.1 113 3e-25
Glyma19g06150.1 107 2e-23
Glyma07g03400.1 87 3e-17
Glyma08g10080.1 84 3e-16
Glyma08g10110.1 81 1e-15
Glyma19g06810.1 79 9e-15
Glyma19g06500.1 58 2e-08
>Glyma19g07170.1
Length = 236
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 26/209 (12%)
Query: 1 MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
+S FST+ + ACLIVYD + GD PV WPQ+PT++H++++KY ++ P + F
Sbjct: 32 VSKFSTMFGDE--ACLIVYDDENGD-VGPVTWPQHPTLIHAIIQKYYEIQSKNERPQETF 88
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
+++FF +KK VE +I+KV+K+I ++K+PTWD ++ +EKLR LIA +D+KI D
Sbjct: 89 VIQDFFANRKKMVEADISKVQKQIASIKYPTWDQSIRNIKEEKLRGLIAHVDSKIRGYDH 148
Query: 121 RVNLLKSMQESEVINLSYKANMVEVEDIS-EPQVI-------------------SAPISP 160
R+N+LK+ +SE S+ NM + S P I A + P
Sbjct: 149 RINMLKNKHQSEA-KFSFVQNMAQASGFSNHPSQILLNDDNRRVNFTNSMDQFDGASLKP 207
Query: 161 VIDG--MVDSTDQVNGPLDCTNQVIEPVD 187
+ D +VDS++QV+ PL TNQ+ E +D
Sbjct: 208 LSDKNEIVDSSNQVDVPLYSTNQLGESID 236
>Glyma13g07720.1
Length = 300
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 143/262 (54%), Gaps = 32/262 (12%)
Query: 1 MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
+S+FST+C + ACLIVYD DG D PV P++P + HS+L+ YE +KN + P KKF
Sbjct: 32 ISEFSTLCGVE--ACLIVYD-DGNGDIEPVTCPKDPVLAHSILQNYEFQKNQR--PPKKF 86
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
+++F E +K +E EI+KV KEI N+K+PT DP F+++ +++LR IA +DAKI CD
Sbjct: 87 GIQDFVEDRKNIIEAEISKVHKEITNIKYPTSDPSFINMEEDQLRAFIALVDAKIRTCDH 146
Query: 121 RVNLLKSMQESEVINLSYKANMV-EVEDISEPQVISAPISPV-IDGMVDSTDQVNGPLDC 178
LK+M +SE ++ NM S P P+ P+ +G VD T+ ++ +
Sbjct: 147 S---LKNMHQSEA---NFMQNMAWGSASSSHP----TPMEPLNNNGRVDVTNSIDQVYEA 196
Query: 179 TNQVIEPVDSDSGLEEWACKFLESCYWADQQGEPEESTDQGPLDCTDQVIDEMVDSTDQF 238
V P + + + L++ S Q LD V DEMV +++
Sbjct: 197 MQLVDAPFSYIPDMVQKSFNCLQNI-----------SQSQPILD----VEDEMVGFSNRV 241
Query: 239 NGPLDCTNQVFEPVDSASGAVI 260
+ LD TNQ+ + +D G +I
Sbjct: 242 DVSLDTTNQIADLLDWFDGPII 263
>Glyma08g22700.1
Length = 211
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 114/187 (60%), Gaps = 13/187 (6%)
Query: 1 MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
+S ST+C + ACLIVYD + DD + WP++PT+V ++E YE ++ K P F
Sbjct: 32 ISQLSTMCRVE--ACLIVYD-EMNDDVGTMTWPKDPTLVRPIIENYESQRAEK--PPNTF 86
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
+++FFE + +E EI+K+ K+ +K+P+WDP ++G E+LR IA ++AKI ACDQ
Sbjct: 87 VIDDFFENRNNMIESEISKLHKQAREIKYPSWDPSLSNMGDEQLRAFIANVNAKIEACDQ 146
Query: 121 RVNLLKSMQESEVINLSYKANMVE------VEDISEPQVISAPISPVIDGMVDSTDQVNG 174
R+++LK+ + E N++ NM +++IS+ Q+I P P++ + D+ +V
Sbjct: 147 RIDMLKNTNQDEANNINSMQNMHGSRQLNFMQNISQSQIIPTPAEPLV--LNDNNGRVLN 204
Query: 175 PLDCTNQ 181
+ TNQ
Sbjct: 205 FANSTNQ 211
>Glyma19g06510.1
Length = 300
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 20/190 (10%)
Query: 4 FSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLE 63
F+ +C + ACLIVYD+D PV WP+ +VHS+L+KYE +KN + P K F +E
Sbjct: 36 FTKMCGVE--ACLIVYDND---HVGPVTWPKEAVLVHSILQKYESQKNER--PPKTFGIE 88
Query: 64 EFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDA---------K 114
+FFE +K VE +I+KV K+I N+K+PTWDP F+++ +++LR LI + D +
Sbjct: 89 DFFENRKNMVEADISKVHKQISNIKYPTWDPSFINMEEKQLRALITQFDGASNHGMNMQQ 148
Query: 115 ISACDQRVNLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDG--MVDSTDQV 172
+ AC + + QES SY + + +++I + Q I + P+ D MVD ++QV
Sbjct: 149 VDACFGYIPTMA--QESANATSSYPSQLNCLQNIPQSQPIFEDLKPLNDKNEMVDFSNQV 206
Query: 173 NGPLDCTNQV 182
+ PLD TNQ+
Sbjct: 207 DVPLDSTNQL 216
>Glyma15g23350.1
Length = 287
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 29/205 (14%)
Query: 1 MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQN-PTVVHSVLEKYECEKNNKTTPVKK 59
M++FS +C + AC+I+YD + GD + P+ WPQ+ P VHS++++YE KN K K
Sbjct: 32 MTEFSNVCGVK--ACMIMYDGNYGD-APPLTWPQDDPIEVHSIIKRYESIKNEKLP--KN 86
Query: 60 FDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACD 119
FDL FFEI+K V+++I+KV+KE + +K+PTW P F +LG E+LR IA LD K+ A
Sbjct: 87 FDLNNFFEIRKNMVDNDISKVQKETLKIKYPTWHPSFNNLGVEELRNFIARLDIKLEA-- 144
Query: 120 QRVNLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDGMVDSTDQVNGPLDCT 179
L + Q E L Y + + E+ED++ ++ +V+S Q + T
Sbjct: 145 ----YLTNHQLGEC--LDYFSQLDEIEDLTSQ----------LNEIVNSGSQPGESIIWT 188
Query: 180 NQVIEPVDSDS-----GLEEWACKF 199
NQ PV S G + KF
Sbjct: 189 NQHGVPVIGGSTTAMNGATNYGTKF 213
>Glyma19g06150.1
Length = 296
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 17/200 (8%)
Query: 2 SDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFD 61
S+FST+C + ACLIVYD +G D PV WP+ P +VH +L+KYE +KN + P K F
Sbjct: 38 SEFSTLCGVE--ACLIVYD-NGNGDVAPVTWPKEPVLVHPILQKYESQKNER--PPKTFG 92
Query: 62 LEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDA-------- 113
+E+F E +K VE +I+KV K+I N+K+PTWDP F ++ +++L+ I + D
Sbjct: 93 IEDFLENRKNMVEADISKVHKQISNIKYPTWDPSFTNMEEKQLKAFITQFDGASNHGMNM 152
Query: 114 -KISACDQRVNLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDGMVDSTDQV 172
++ AC + + QES SY +++I + Q I + P +D + +
Sbjct: 153 QQVDACYGYIPTMA--QESTNSTSSYPRQFNCLQNIPQSQPIFEDLKP-LDYKNEMIQLI 209
Query: 173 NGPLDCTNQVIEPVDSDSGL 192
N T +I V +GL
Sbjct: 210 NLVCMRTGLIINSVTLRTGL 229
>Glyma07g03400.1
Length = 166
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 9/134 (6%)
Query: 1 MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
+S ST+C + ACLIVYD GD V WP+NPT+V ++E YE ++ K P K F
Sbjct: 32 ISQLSTMCGVE--ACLIVYDDINGDVGA-VTWPENPTLVRPIIENYERQRAEK--PPKTF 86
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLR----PLIAELDAKIS 116
+++FFE +K VE EI+K+ K+ +K+PTW P ++ KE+L+ P L
Sbjct: 87 VIQDFFENRKNMVEAEISKLHKQAREIKYPTWGPSLSNMEKEQLKFTSNPCKIWLRKVGG 146
Query: 117 ACDQRVNLLKSMQE 130
A V++L+++Q+
Sbjct: 147 ASSHGVSMLRNIQQ 160
>Glyma08g10080.1
Length = 273
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 78/126 (61%), Gaps = 8/126 (6%)
Query: 3 DFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNP--TVVHSVLEKYECEKNNKTTPVKKF 60
+FST+C + +I+Y ++ P WPQ+ V V++KY +++ V +
Sbjct: 34 EFSTLC--AVDVGVIIYAPKYLNE--PETWPQDKDSREVKRVIQKYHNTTSDRHPKV--Y 87
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
D++E+F + K +E EI+KV KE I L +PTW+ + +LG+++LR + LDAK+ AC+Q
Sbjct: 88 DVQEYFNDRMKKIESEISKVHKEEIKLMYPTWNESYNTLGEKQLRMFVGILDAKLDACNQ 147
Query: 121 RVNLLK 126
R+N+LK
Sbjct: 148 RMNMLK 153
>Glyma08g10110.1
Length = 181
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 8/152 (5%)
Query: 3 DFSTICDSQSNACLIVYDHDGGDDSTPVIWPQN--PTVVHSVLEKYECEKNNKTTPVKKF 60
+FS +C + +I+Y D+ P WPQ+ + V++KY+ +++ V +
Sbjct: 27 EFSILC--AVDVGIIIYAPKFLDE--PETWPQDQDSRELKRVIQKYQNTTSDRCPKV--Y 80
Query: 61 DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
++E+F K K +E EI+KV KE I L +PTW+ + +LG+E+LR ++ LDAK AC Q
Sbjct: 81 SVQEYFNDKMKKIEGEISKVHKEKIKLMYPTWNDSYNTLGEEQLRMFVSILDAKFDACSQ 140
Query: 121 RVNLLKSMQESEVINLSYKANMVEVEDISEPQ 152
R+N+LK ++ Y + V ++++S+ Q
Sbjct: 141 RMNMLKKGKDKVETLTPYMTSNVGMQNMSQTQ 172
>Glyma19g06810.1
Length = 246
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 24/204 (11%)
Query: 58 KKFDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISA 117
+ +++F E +K VE +I+KV KEI N+K+PTW+P F ++ +E+LR IA +DAKI A
Sbjct: 29 RPLSIQDFVEDRKSIVEAKISKVHKEITNIKYPTWNPSFRNMEEEQLRAFIALVDAKIRA 88
Query: 118 CDQRVNLLKSMQESEVINLSYKANMV-EVEDISEPQVISAPISPV-IDGMVDSTDQVNGP 175
CD LK+M +SE ++ NM S S P+ P+ +G VD T+ +N
Sbjct: 89 CDH---TLKNMHQSEG---NFMQNMAWGNASFSH----STPMEPLNNNGSVDVTNSINQL 138
Query: 176 LDCTNQVIEPVDSDSGLEEWACKFLESCYWADQQGEPEESTDQGPLDCTDQVIDEMVDST 235
+ N + D ++E A +C Q +P L+ V +EMV +
Sbjct: 139 YEACNHGLYIPDV---VQESA-----NCLQNISQSQPIHEEALKTLN----VENEMVGFS 186
Query: 236 DQFNGPLDCTNQVFEPVDSASGAV 259
++ + PLD NQ+ + +D G +
Sbjct: 187 NRVDVPLDNPNQLGDLLDWFDGPI 210
>Glyma19g06500.1
Length = 243
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)
Query: 3 DFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDL 62
+FST+C + ACLIVYD+ D P+ P++PTVVHS+L+K
Sbjct: 34 EFSTMCGVE--ACLIVYDNGNNGDVAPLTCPRDPTVVHSILQK-------------TLVF 78
Query: 63 EEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRV 122
+ FF I++ ++ K IN + PT + LG + A KI ACD
Sbjct: 79 KTFFRIERTCLKLRFPKC----IN-RSPTSS---IQLGIQ------ASQTWKIRACDHM- 123
Query: 123 NLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDG--MVDSTDQVNGPLDCTN 180
L +S S + +++I + Q I + + + MVD ++QV+ PLD TN
Sbjct: 124 -LENKHPKSASATSSCFCLLNCLQNIYQSQPILEDLKALNNKNEMVDFSNQVDVPLDSTN 182
Query: 181 QVIEPVD 187
Q++E +D
Sbjct: 183 QLVEFMD 189