Miyakogusa Predicted Gene

Lj1g3v0268770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0268770.1 tr|G7KHI2|G7KHI2_MEDTR MADS-box transcription
factor OS=Medicago truncatula GN=MTR_6g005440 PE=3
SV=,38.06,1e-16,coiled-coil,NULL,CUFF.25450.1
         (356 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g07170.1                                                       134   1e-31
Glyma13g07720.1                                                       126   3e-29
Glyma08g22700.1                                                       124   1e-28
Glyma19g06510.1                                                       123   3e-28
Glyma15g23350.1                                                       113   3e-25
Glyma19g06150.1                                                       107   2e-23
Glyma07g03400.1                                                        87   3e-17
Glyma08g10080.1                                                        84   3e-16
Glyma08g10110.1                                                        81   1e-15
Glyma19g06810.1                                                        79   9e-15
Glyma19g06500.1                                                        58   2e-08

>Glyma19g07170.1 
          Length = 236

 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 123/209 (58%), Gaps = 26/209 (12%)

Query: 1   MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
           +S FST+   +  ACLIVYD + GD   PV WPQ+PT++H++++KY   ++    P + F
Sbjct: 32  VSKFSTMFGDE--ACLIVYDDENGD-VGPVTWPQHPTLIHAIIQKYYEIQSKNERPQETF 88

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
            +++FF  +KK VE +I+KV+K+I ++K+PTWD    ++ +EKLR LIA +D+KI   D 
Sbjct: 89  VIQDFFANRKKMVEADISKVQKQIASIKYPTWDQSIRNIKEEKLRGLIAHVDSKIRGYDH 148

Query: 121 RVNLLKSMQESEVINLSYKANMVEVEDIS-EPQVI-------------------SAPISP 160
           R+N+LK+  +SE    S+  NM +    S  P  I                    A + P
Sbjct: 149 RINMLKNKHQSEA-KFSFVQNMAQASGFSNHPSQILLNDDNRRVNFTNSMDQFDGASLKP 207

Query: 161 VIDG--MVDSTDQVNGPLDCTNQVIEPVD 187
           + D   +VDS++QV+ PL  TNQ+ E +D
Sbjct: 208 LSDKNEIVDSSNQVDVPLYSTNQLGESID 236


>Glyma13g07720.1 
          Length = 300

 Score =  126 bits (317), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 143/262 (54%), Gaps = 32/262 (12%)

Query: 1   MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
           +S+FST+C  +  ACLIVYD DG  D  PV  P++P + HS+L+ YE +KN +  P KKF
Sbjct: 32  ISEFSTLCGVE--ACLIVYD-DGNGDIEPVTCPKDPVLAHSILQNYEFQKNQR--PPKKF 86

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
            +++F E +K  +E EI+KV KEI N+K+PT DP F+++ +++LR  IA +DAKI  CD 
Sbjct: 87  GIQDFVEDRKNIIEAEISKVHKEITNIKYPTSDPSFINMEEDQLRAFIALVDAKIRTCDH 146

Query: 121 RVNLLKSMQESEVINLSYKANMV-EVEDISEPQVISAPISPV-IDGMVDSTDQVNGPLDC 178
               LK+M +SE    ++  NM       S P     P+ P+  +G VD T+ ++   + 
Sbjct: 147 S---LKNMHQSEA---NFMQNMAWGSASSSHP----TPMEPLNNNGRVDVTNSIDQVYEA 196

Query: 179 TNQVIEPVDSDSGLEEWACKFLESCYWADQQGEPEESTDQGPLDCTDQVIDEMVDSTDQF 238
              V  P      + + +   L++            S  Q  LD    V DEMV  +++ 
Sbjct: 197 MQLVDAPFSYIPDMVQKSFNCLQNI-----------SQSQPILD----VEDEMVGFSNRV 241

Query: 239 NGPLDCTNQVFEPVDSASGAVI 260
           +  LD TNQ+ + +D   G +I
Sbjct: 242 DVSLDTTNQIADLLDWFDGPII 263


>Glyma08g22700.1 
          Length = 211

 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 114/187 (60%), Gaps = 13/187 (6%)

Query: 1   MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
           +S  ST+C  +  ACLIVYD +  DD   + WP++PT+V  ++E YE ++  K  P   F
Sbjct: 32  ISQLSTMCRVE--ACLIVYD-EMNDDVGTMTWPKDPTLVRPIIENYESQRAEK--PPNTF 86

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
            +++FFE +   +E EI+K+ K+   +K+P+WDP   ++G E+LR  IA ++AKI ACDQ
Sbjct: 87  VIDDFFENRNNMIESEISKLHKQAREIKYPSWDPSLSNMGDEQLRAFIANVNAKIEACDQ 146

Query: 121 RVNLLKSMQESEVINLSYKANMVE------VEDISEPQVISAPISPVIDGMVDSTDQVNG 174
           R+++LK+  + E  N++   NM        +++IS+ Q+I  P  P++  + D+  +V  
Sbjct: 147 RIDMLKNTNQDEANNINSMQNMHGSRQLNFMQNISQSQIIPTPAEPLV--LNDNNGRVLN 204

Query: 175 PLDCTNQ 181
             + TNQ
Sbjct: 205 FANSTNQ 211


>Glyma19g06510.1 
          Length = 300

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 115/190 (60%), Gaps = 20/190 (10%)

Query: 4   FSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDLE 63
           F+ +C  +  ACLIVYD+D      PV WP+   +VHS+L+KYE +KN +  P K F +E
Sbjct: 36  FTKMCGVE--ACLIVYDND---HVGPVTWPKEAVLVHSILQKYESQKNER--PPKTFGIE 88

Query: 64  EFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDA---------K 114
           +FFE +K  VE +I+KV K+I N+K+PTWDP F+++ +++LR LI + D          +
Sbjct: 89  DFFENRKNMVEADISKVHKQISNIKYPTWDPSFINMEEKQLRALITQFDGASNHGMNMQQ 148

Query: 115 ISACDQRVNLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDG--MVDSTDQV 172
           + AC   +  +   QES     SY + +  +++I + Q I   + P+ D   MVD ++QV
Sbjct: 149 VDACFGYIPTMA--QESANATSSYPSQLNCLQNIPQSQPIFEDLKPLNDKNEMVDFSNQV 206

Query: 173 NGPLDCTNQV 182
           + PLD TNQ+
Sbjct: 207 DVPLDSTNQL 216


>Glyma15g23350.1 
          Length = 287

 Score =  113 bits (283), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 29/205 (14%)

Query: 1   MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQN-PTVVHSVLEKYECEKNNKTTPVKK 59
           M++FS +C  +  AC+I+YD + GD + P+ WPQ+ P  VHS++++YE  KN K    K 
Sbjct: 32  MTEFSNVCGVK--ACMIMYDGNYGD-APPLTWPQDDPIEVHSIIKRYESIKNEKLP--KN 86

Query: 60  FDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACD 119
           FDL  FFEI+K  V+++I+KV+KE + +K+PTW P F +LG E+LR  IA LD K+ A  
Sbjct: 87  FDLNNFFEIRKNMVDNDISKVQKETLKIKYPTWHPSFNNLGVEELRNFIARLDIKLEA-- 144

Query: 120 QRVNLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDGMVDSTDQVNGPLDCT 179
                L + Q  E   L Y + + E+ED++            ++ +V+S  Q    +  T
Sbjct: 145 ----YLTNHQLGEC--LDYFSQLDEIEDLTSQ----------LNEIVNSGSQPGESIIWT 188

Query: 180 NQVIEPVDSDS-----GLEEWACKF 199
           NQ   PV   S     G   +  KF
Sbjct: 189 NQHGVPVIGGSTTAMNGATNYGTKF 213


>Glyma19g06150.1 
          Length = 296

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 17/200 (8%)

Query: 2   SDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFD 61
           S+FST+C  +  ACLIVYD +G  D  PV WP+ P +VH +L+KYE +KN +  P K F 
Sbjct: 38  SEFSTLCGVE--ACLIVYD-NGNGDVAPVTWPKEPVLVHPILQKYESQKNER--PPKTFG 92

Query: 62  LEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDA-------- 113
           +E+F E +K  VE +I+KV K+I N+K+PTWDP F ++ +++L+  I + D         
Sbjct: 93  IEDFLENRKNMVEADISKVHKQISNIKYPTWDPSFTNMEEKQLKAFITQFDGASNHGMNM 152

Query: 114 -KISACDQRVNLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDGMVDSTDQV 172
            ++ AC   +  +   QES     SY      +++I + Q I   + P +D   +    +
Sbjct: 153 QQVDACYGYIPTMA--QESTNSTSSYPRQFNCLQNIPQSQPIFEDLKP-LDYKNEMIQLI 209

Query: 173 NGPLDCTNQVIEPVDSDSGL 192
           N     T  +I  V   +GL
Sbjct: 210 NLVCMRTGLIINSVTLRTGL 229


>Glyma07g03400.1 
          Length = 166

 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 79/134 (58%), Gaps = 9/134 (6%)

Query: 1   MSDFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKF 60
           +S  ST+C  +  ACLIVYD   GD    V WP+NPT+V  ++E YE ++  K  P K F
Sbjct: 32  ISQLSTMCGVE--ACLIVYDDINGDVGA-VTWPENPTLVRPIIENYERQRAEK--PPKTF 86

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLR----PLIAELDAKIS 116
            +++FFE +K  VE EI+K+ K+   +K+PTW P   ++ KE+L+    P    L     
Sbjct: 87  VIQDFFENRKNMVEAEISKLHKQAREIKYPTWGPSLSNMEKEQLKFTSNPCKIWLRKVGG 146

Query: 117 ACDQRVNLLKSMQE 130
           A    V++L+++Q+
Sbjct: 147 ASSHGVSMLRNIQQ 160


>Glyma08g10080.1 
          Length = 273

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 78/126 (61%), Gaps = 8/126 (6%)

Query: 3   DFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNP--TVVHSVLEKYECEKNNKTTPVKKF 60
           +FST+C    +  +I+Y     ++  P  WPQ+     V  V++KY    +++   V  +
Sbjct: 34  EFSTLC--AVDVGVIIYAPKYLNE--PETWPQDKDSREVKRVIQKYHNTTSDRHPKV--Y 87

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
           D++E+F  + K +E EI+KV KE I L +PTW+  + +LG+++LR  +  LDAK+ AC+Q
Sbjct: 88  DVQEYFNDRMKKIESEISKVHKEEIKLMYPTWNESYNTLGEKQLRMFVGILDAKLDACNQ 147

Query: 121 RVNLLK 126
           R+N+LK
Sbjct: 148 RMNMLK 153


>Glyma08g10110.1 
          Length = 181

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/152 (32%), Positives = 88/152 (57%), Gaps = 8/152 (5%)

Query: 3   DFSTICDSQSNACLIVYDHDGGDDSTPVIWPQN--PTVVHSVLEKYECEKNNKTTPVKKF 60
           +FS +C    +  +I+Y     D+  P  WPQ+     +  V++KY+   +++   V  +
Sbjct: 27  EFSILC--AVDVGIIIYAPKFLDE--PETWPQDQDSRELKRVIQKYQNTTSDRCPKV--Y 80

Query: 61  DLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQ 120
            ++E+F  K K +E EI+KV KE I L +PTW+  + +LG+E+LR  ++ LDAK  AC Q
Sbjct: 81  SVQEYFNDKMKKIEGEISKVHKEKIKLMYPTWNDSYNTLGEEQLRMFVSILDAKFDACSQ 140

Query: 121 RVNLLKSMQESEVINLSYKANMVEVEDISEPQ 152
           R+N+LK  ++       Y  + V ++++S+ Q
Sbjct: 141 RMNMLKKGKDKVETLTPYMTSNVGMQNMSQTQ 172


>Glyma19g06810.1 
          Length = 246

 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 24/204 (11%)

Query: 58  KKFDLEEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISA 117
           +   +++F E +K  VE +I+KV KEI N+K+PTW+P F ++ +E+LR  IA +DAKI A
Sbjct: 29  RPLSIQDFVEDRKSIVEAKISKVHKEITNIKYPTWNPSFRNMEEEQLRAFIALVDAKIRA 88

Query: 118 CDQRVNLLKSMQESEVINLSYKANMV-EVEDISEPQVISAPISPV-IDGMVDSTDQVNGP 175
           CD     LK+M +SE    ++  NM       S     S P+ P+  +G VD T+ +N  
Sbjct: 89  CDH---TLKNMHQSEG---NFMQNMAWGNASFSH----STPMEPLNNNGSVDVTNSINQL 138

Query: 176 LDCTNQVIEPVDSDSGLEEWACKFLESCYWADQQGEPEESTDQGPLDCTDQVIDEMVDST 235
            +  N  +   D    ++E A     +C     Q +P        L+    V +EMV  +
Sbjct: 139 YEACNHGLYIPDV---VQESA-----NCLQNISQSQPIHEEALKTLN----VENEMVGFS 186

Query: 236 DQFNGPLDCTNQVFEPVDSASGAV 259
           ++ + PLD  NQ+ + +D   G +
Sbjct: 187 NRVDVPLDNPNQLGDLLDWFDGPI 210


>Glyma19g06500.1 
          Length = 243

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 89/187 (47%), Gaps = 33/187 (17%)

Query: 3   DFSTICDSQSNACLIVYDHDGGDDSTPVIWPQNPTVVHSVLEKYECEKNNKTTPVKKFDL 62
           +FST+C  +  ACLIVYD+    D  P+  P++PTVVHS+L+K                 
Sbjct: 34  EFSTMCGVE--ACLIVYDNGNNGDVAPLTCPRDPTVVHSILQK-------------TLVF 78

Query: 63  EEFFEIKKKSVEDEIAKVKKEIINLKFPTWDPIFLSLGKEKLRPLIAELDAKISACDQRV 122
           + FF I++  ++    K     IN + PT     + LG +      A    KI ACD   
Sbjct: 79  KTFFRIERTCLKLRFPKC----IN-RSPTSS---IQLGIQ------ASQTWKIRACDHM- 123

Query: 123 NLLKSMQESEVINLSYKANMVEVEDISEPQVISAPISPVIDG--MVDSTDQVNGPLDCTN 180
            L     +S     S    +  +++I + Q I   +  + +   MVD ++QV+ PLD TN
Sbjct: 124 -LENKHPKSASATSSCFCLLNCLQNIYQSQPILEDLKALNNKNEMVDFSNQVDVPLDSTN 182

Query: 181 QVIEPVD 187
           Q++E +D
Sbjct: 183 QLVEFMD 189