Miyakogusa Predicted Gene
- Lj1g3v0268490.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0268490.1 Non Chatacterized Hit- tr|I3M3B5|I3M3B5_SPETR
Uncharacterized protein OS=Spermophilus
tridecemlineat,35.35,0.000000000008,FYVE/PHD zinc finger,Zinc finger,
FYVE/PHD-type; ZF_PHD_2,Zinc finger, PHD-finger; ZF_RING_2,Zinc
fi,CUFF.25438.1
(649 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g12450.1 505 e-143
Glyma14g24930.1 388 e-107
Glyma13g09480.1 366 e-101
Glyma13g09490.1 120 4e-27
Glyma14g24920.1 118 2e-26
Glyma13g09510.1 110 7e-24
Glyma19g01310.1 72 2e-12
Glyma13g23910.1 72 3e-12
Glyma12g01040.1 64 7e-10
Glyma18g14500.1 59 2e-08
Glyma02g10600.1 55 2e-07
Glyma09g36290.1 55 3e-07
Glyma18g52260.1 55 3e-07
Glyma04g00320.1 53 1e-06
Glyma08g09120.1 50 8e-06
Glyma05g26180.1 50 1e-05
>Glyma06g12450.1
Length = 405
Score = 505 bits (1301), Expect = e-143, Method: Compositional matrix adjust.
Identities = 252/394 (63%), Positives = 297/394 (75%), Gaps = 14/394 (3%)
Query: 264 CQHVFRNILASEKFSSLSKVLLENFQGMKPESVFDFSVINSRMKEQAYDQSPTLFLLDIQ 323
CQ V N+L SEKFSSL K LLENFQGMKPESV DF+V+NSRMKEQAY+QSPTLFL DIQ
Sbjct: 2 CQRVLCNVLTSEKFSSLCKALLENFQGMKPESVLDFTVMNSRMKEQAYEQSPTLFLSDIQ 61
Query: 324 QVWMKLQNTGNKIVAIAKSLSNMSKTSYYEQFSNWESNSHMKQEQTEECAT--------Y 375
QVW KLQ+ GN+IVA+AKSLSNMS+TSY E S + + + C T +
Sbjct: 62 QVWRKLQDAGNEIVALAKSLSNMSRTSYSELVSLF--SLLLDFIVFFLCVTLVLGNLCVW 119
Query: 376 KICTCRHCGEKADGTDCLVCDSCEEMYHVSCIEPAVKEI-PHKSWFCAHCTASGIGSPHE 434
+ C+ CGEKAD TDCLVCDSCEE+YHVSCIEPAVKEI PHKSW+CA+CTA+ I S HE
Sbjct: 120 PLAFCKCCGEKADDTDCLVCDSCEEIYHVSCIEPAVKEIIPHKSWYCANCTANVIESLHE 179
Query: 435 DCVVCERLNVPKTLNNIVGEESFHAXXXXXXXXXXXXXCSYDGIQVSKGGTNSSHCKICG 494
+CV+CERLN KTL++++G+ SF C+ DGIQVS G + +CKIC
Sbjct: 180 NCVLCERLNDAKTLDDVIGDGSFPTIEETQNEFEENSNCTSDGIQVSIGEEKTPNCKICE 239
Query: 495 QEVDGEKIKICGHSFCSSKYYHVRCLSGKQIKSYGRCWYCPSCLCQVCFADRDDDKIVRC 554
EVDG KIKICGH FCS+KYYHVRCL+ Q+KSYG CWYCPSCLC+VC D+DDD+IV C
Sbjct: 240 NEVDGGKIKICGHRFCSNKYYHVRCLTINQLKSYGHCWYCPSCLCRVCLTDQDDDRIVLC 299
Query: 555 DGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAGIQAIREARKAYETNNSRSD-ENVSKLND 613
DGCDHAYHIYCM+PP+ SIPRG WFCR CDAGIQAI +A+KAYE N R + E+ +K N
Sbjct: 300 DGCDHAYHIYCMKPPRTSIPRGNWFCRKCDAGIQAIHQAKKAYEFNKPRRNGEDAAKPNA 359
Query: 614 --DKKWNNKQGKELDKVGGMDMLLTAANTLKFEE 645
+KK NNK+ +EL+ G MDMLLTAANTL FEE
Sbjct: 360 NLEKKHNNKRARELESGGAMDMLLTAANTLNFEE 393
>Glyma14g24930.1
Length = 296
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 212/265 (80%), Gaps = 2/265 (0%)
Query: 364 MKQEQTEECATYKICTCRHCGEKADGTDCLVCDSCEEMYHVSCIEPAVKEIPHKSWFCAH 423
MK EQT EC +++ TC HCG+KADGTDCLVCDSCEEMYH+SCIEPAVKEIP+KSWFCA+
Sbjct: 1 MKPEQTVECVAFRLGTCWHCGDKADGTDCLVCDSCEEMYHLSCIEPAVKEIPYKSWFCAN 60
Query: 424 CTASGIGSPHEDCVVCERLNVPKTLNNIVGEESFHAXXXXXXXXXXXXXCSYDGIQVSKG 483
CTA+GIG H++CVVCERLN KTL++IVGEE+ C+YDGIQ+S
Sbjct: 61 CTANGIGCRHKNCVVCERLNALKTLDDIVGEENIPTNEETLNELEENSNCTYDGIQISTD 120
Query: 484 GTNSSHCKICGQEVDGEKIKICGHSFCSSKYYHVRCLSGKQIKSYGRCWYCPSCLCQVCF 543
NSS CKIC VDGEK+KICGHSFC SKYYHV CLS KQ+KSYG CWYCPSC+CQVC
Sbjct: 121 RRNSSDCKICKMAVDGEKVKICGHSFCPSKYYHVSCLSSKQLKSYGHCWYCPSCICQVCL 180
Query: 544 ADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAGIQAIREARKAYETNNSR 603
D+DD+KIV CD CDHAYH+YCM+PPQNSIP+GKWFC C+AGIQAIR+ARKAYE+N +
Sbjct: 181 TDKDDNKIVLCDACDHAYHVYCMKPPQNSIPKGKWFCIKCEAGIQAIRQARKAYESNKGK 240
Query: 604 SDENVSKLND--DKKWNNKQGKELD 626
+N SK N+ DKKWN K+G+ELD
Sbjct: 241 VGQNDSKPNEDIDKKWNKKRGRELD 265
>Glyma13g09480.1
Length = 262
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/248 (69%), Positives = 199/248 (80%), Gaps = 3/248 (1%)
Query: 401 MYHVSCIEPAVKEIPHKSWFCAHCTASGIGSPHEDCVVCERLNVPKTLNNIVGEESFHAX 460
MYH+SCIEPAVKEIP KSWFCA+CTA+GIG H++CVVCE+LNV KTL++ VGEE+F
Sbjct: 1 MYHLSCIEPAVKEIPRKSWFCANCTANGIGCRHKNCVVCEQLNVLKTLDDFVGEENFPTN 60
Query: 461 XXXXXXXXXXXXCSYDGIQVSKGGTNSSHCKICGQEVDGEKIKICGHSFCSSKYYHVRCL 520
C+YDGIQVS G NSS+CKIC VDGEK+KICGHSFC SKYYHVRCL
Sbjct: 61 EETLNELEEYSNCTYDGIQVSTDGRNSSNCKICKMAVDGEKVKICGHSFCPSKYYHVRCL 120
Query: 521 SGKQIKSYGRCWYCPSCLCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFC 580
S KQ+KSYG CWYCPSC+CQVC D+DDDKIV CDGCDHAYHIYCM+PPQNSIP+GKWFC
Sbjct: 121 SSKQLKSYGNCWYCPSCICQVCLTDKDDDKIVLCDGCDHAYHIYCMKPPQNSIPKGKWFC 180
Query: 581 RSCDAGIQAIREARKAYETNNSRSDENVSKLND--DKKWNNKQGKELDKVGG-MDMLLTA 637
C+AGIQAIR+ARKAYE+ + +N SK N+ DKKWN K+G+E DKVGG MDML+ A
Sbjct: 181 IKCEAGIQAIRQARKAYESKKGKVGQNDSKPNEDIDKKWNKKRGRESDKVGGMMDMLINA 240
Query: 638 ANTLKFEE 645
ANTL EE
Sbjct: 241 ANTLNSEE 248
>Glyma13g09490.1
Length = 73
Score = 120 bits (302), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 252 SSESDGRGVTERCQHVFRNILASEKFSSLSKVLLENFQGMKPESVFDFSVINSRMKEQAY 311
SSES+G G T RCQ VFR+ILASEKFSSL KVLLENF+GMKPE+VFDFS+INSRMK QAY
Sbjct: 1 SSESNGHGATGRCQRVFRDILASEKFSSLCKVLLENFRGMKPETVFDFSLINSRMKGQAY 60
Query: 312 DQSPTLFLLDIQQ 324
+QSPTLFL D QQ
Sbjct: 61 EQSPTLFLSDFQQ 73
>Glyma14g24920.1
Length = 73
Score = 118 bits (296), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/73 (80%), Positives = 65/73 (89%)
Query: 252 SSESDGRGVTERCQHVFRNILASEKFSSLSKVLLENFQGMKPESVFDFSVINSRMKEQAY 311
SSES+GR TE CQ VFR+ILASEKFSSL KVLLENFQG KPE+VFDFS+INSRMK QAY
Sbjct: 1 SSESNGRDTTEGCQRVFRDILASEKFSSLCKVLLENFQGTKPETVFDFSLINSRMKGQAY 60
Query: 312 DQSPTLFLLDIQQ 324
+QSPTLFL D+QQ
Sbjct: 61 EQSPTLFLSDVQQ 73
>Glyma13g09510.1
Length = 341
Score = 110 bits (274), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/237 (40%), Positives = 123/237 (51%), Gaps = 35/237 (14%)
Query: 4 EDGTSNAHNAVCAEDPC-LNPGAVNNGVTMXXXXXXXXXXXXQAWKNEAVNNGVAIGGGD 62
+DG N A+ AE+ L AV+NGV + + KN VNNG+AI GG+
Sbjct: 49 KDGAVNNGVAIEAEEVWGLKKEAVDNGVAVVGGDGVVEGEEVRGLKNVTVNNGMAIEGGN 108
Query: 63 DVAEGGKIQGLKNESVNNEVTMEDADGVAEGEEVRCLEEGTVGNGVAIGSGDDVAEGGKT 122
VAEG K+ LKNE +N+ V + D +G AE EV + +G VAI G+ AE G+
Sbjct: 109 GVAEG-KVWALKNEVINSGVAIADGNGAAEDGEVSGSKNDVIG--VAIADGNGFAEHGEV 165
Query: 123 QGLKNESVNNGVAIADGN--------------------------GVAEGEEVRCLKEGTV 156
G KNE+V+N V DGN GV EG+E CL+ GTV
Sbjct: 166 WGSKNEAVSNEVPFVDGNCVVYSGEVQGSKNGAVNNEVVIADEIGVTEGQEDHCLQNGTV 225
Query: 157 DNGMAVADRFGSSERDSGGVECLRTYKRRKRGKSSSEIKVQEGSGEDAETINQLSGQ 213
DN +A A+ E +SG VEC +TYKRRK K SSE +VQE S + +QLS Q
Sbjct: 226 DNVVANAN-----EGNSGSVECFQTYKRRKHVKLSSEFEVQENSRKHMAAASQLSEQ 277
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 20/102 (19%)
Query: 88 DGVAEGEEVRCLEEGTVGNGVAIGSGD-------------------DVAEGGKTQGLKNE 128
+GVAEGE R L++G V NGVAI + + V EG + +GLKN
Sbjct: 37 NGVAEGEGDRGLKDGAVNNGVAIEAEEVWGLKKEAVDNGVAVVGGDGVVEGEEVRGLKNV 96
Query: 129 SVNNGVAIADGNGVAEGEEVRCLKEGTVDNGMAVADRFGSSE 170
+VNNG+AI GNGVAEG +V LK +++G+A+AD G++E
Sbjct: 97 TVNNGMAIEGGNGVAEG-KVWALKNEVINSGVAIADGNGAAE 137
>Glyma19g01310.1
Length = 2092
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 513 KYYHVRCLSGKQ-------IKSYGRCWYCP--SCLCQVCFADRDDDKIVRCDGCDHAYHI 563
+Y V CLS + I+S P +C+VC DRDDD ++ CD CD YH
Sbjct: 1194 EYAKVECLSAEMRKEVVDFIESTNEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHT 1253
Query: 564 YCMEPPQNSIPRGKWFCRSCDAGIQAIREA 593
YC+ PP IP G W+C SC G +A ++
Sbjct: 1254 YCLNPPLARIPEGNWYCPSCVDGKRATQDV 1283
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 60/151 (39%), Gaps = 22/151 (14%)
Query: 297 FDFSVINSRMKEQAYDQSPTLFLLDIQQVW----------MKLQNTGNKIVAIAKSLSNM 346
DF I+ R+ AY S FL D+ ++W L K+ +SL N
Sbjct: 1124 LDFRTIDLRLATGAYGGSHEAFLEDVHELWNNVRVAFGDQPDLIELAEKLSLNFESLYNE 1183
Query: 347 SKTSYYEQFSNWESNSHMKQEQTEECATYKICT------------CRHCGEKADGTDCLV 394
SY ++F + + E +E + T C+ CG D L+
Sbjct: 1184 EVVSYVQKFVEYAKVECLSAEMRKEVVDFIESTNEIPKAPWDEGVCKVCGIDRDDDSVLL 1243
Query: 395 CDSCEEMYHVSCIEPAVKEIPHKSWFCAHCT 425
CD+C+ YH C+ P + IP +W+C C
Sbjct: 1244 CDTCDAEYHTYCLNPPLARIPEGNWYCPSCV 1274
>Glyma13g23910.1
Length = 2142
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 538 LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAGIQA 589
+C+VC DRDDD ++ CD CD YH YC+ PP IP G W+C SC G A
Sbjct: 1291 VCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVVGKHA 1342
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 297 FDFSVINSRMKEQAYDQSPTLFLLDIQQVW----------MKLQNTGNKIVAIAKSLSNM 346
DF I+ R+ AY S FL D++++W L K+ +SL N
Sbjct: 1187 LDFRTIDLRLATGAYGGSHEAFLEDVRELWNNVRVAFGDQPDLVELAEKLTQNFESLYNE 1246
Query: 347 SKTSYYEQFSNWESNSHMKQEQTEECATYKICT------------CRHCGEKADGTDCLV 394
+Y ++F + + E +E + T C+ CG D L+
Sbjct: 1247 EVVTYVQRFVEYAKLECLSAEMRKEVGDFIESTNEIPKAPWDEGVCKVCGIDRDDDSVLL 1306
Query: 395 CDSCEEMYHVSCIEPAVKEIPHKSWFCAHCTA 426
CD+C+ YH C+ P + IP +W+C C
Sbjct: 1307 CDTCDAEYHTYCLNPPLARIPEGNWYCPSCVV 1338
>Glyma12g01040.1
Length = 811
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 482 KGGTNSSHCKIC--GQEVDGEKIKICGHSFCSSKYYHVRCLSGKQIKSYGR--------C 531
+G N S+C+IC G+ EK + K YH CL +S+GR
Sbjct: 129 QGQANRSYCRICKCGENEGSEKAQKMLSCKSCGKKYHRNCL-----RSWGRNRDLFHWSS 183
Query: 532 WYCPSC-LCQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFC 580
W CP C +C+ C D K + C CD AYH YC++PP S+ G + C
Sbjct: 184 WTCPLCRICEACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLC 233
>Glyma18g14500.1
Length = 206
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 539 CQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
C+VC K++ CD CD YH++C+ P +P+G WFC SC
Sbjct: 25 CEVCSGGHSPSKLILCDKCDRGYHLFCLRPILPYVPKGSWFCPSC 69
>Glyma02g10600.1
Length = 334
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 539 CQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
C+ C K++ CD CD YH++C+ P S+P+G WFC SC
Sbjct: 25 CEECGGGHSPSKLILCDKCDRGYHLFCLRPILPSVPKGSWFCPSC 69
>Glyma09g36290.1
Length = 833
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 482 KGGTNSSHCKICGQEVDGEKIKICGHSFCSSKYYHVRCLSGKQIKSYG-RCWYCPSC-LC 539
+G N S+C+IC CG + S K + LS K + W CP C +C
Sbjct: 133 QGQANRSYCRICK----------CGENEGSEKAQKM--LSCKSCDLFHWSSWTCPLCRIC 180
Query: 540 QVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFC 580
+ C D K + C CD AYH YC++PP S+ G + C
Sbjct: 181 EACRRTGDPSKFMFCKRCDGAYHCYCLQPPHKSVCNGPYLC 221
>Glyma18g52260.1
Length = 334
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 539 CQVCFADRDDDKIVRCDGCDHAYHIYCMEPPQNSIPRGKWFCRSC 583
C+ C K++ CD CD YH++C+ P S+P+G WFC SC
Sbjct: 25 CEECGGGHSPSKLLLCDKCDRGYHLFCLRPILPSVPKGSWFCPSC 69
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 379 TCRHCGEKADGTDCLVCDSCEEMYHVSCIEPAVKEIPHKSWFCAHCT 425
+C CG + L+CD C+ YH+ C+ P + +P SWFC C+
Sbjct: 24 SCEECGGGHSPSKLLLCDKCDRGYHLFCLRPILPSVPKGSWFCPSCS 70
>Glyma04g00320.1
Length = 488
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 379 TCRHCGEKADGTDCLVCDSCEEMYHVSCIEPAVKEIPHKSWFCAHC 424
+C+ CG+ + + L+CD CE+ YH+SC P +K++P WFC C
Sbjct: 252 SCKICGDLDNSLNMLLCDHCEDAYHLSCYNPRLKKLPIDEWFCHSC 297
>Glyma08g09120.1
Length = 2212
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 12/77 (15%)
Query: 554 CDGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAGIQAI----------REARKAYETNNSR 603
CD C YH+ C++PP IP GKW C SC G + + AR T ++
Sbjct: 23 CDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGKDQLMPKNHLDPISKRARTKIVT--TK 80
Query: 604 SDENVSKLNDDKKWNNK 620
S + VS LN +K + K
Sbjct: 81 SKDQVSSLNLEKVFGTK 97
>Glyma05g26180.1
Length = 2340
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 554 CDGCDHAYHIYCMEPPQNSIPRGKWFCRSCDAG------IQAIREARKAYETN--NSRSD 605
CD C YH+ C++PP IP GKW C SC G I + K T ++S
Sbjct: 95 CDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGKDQRMPINHLDPISKRARTKIVTTKSK 154
Query: 606 ENVSKLNDDKKWNNK 620
+ VS LN +K + K
Sbjct: 155 DQVSSLNLEKVFGTK 169