Miyakogusa Predicted Gene

Lj1g3v0265410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0265410.1 Non Chatacterized Hit- tr|I1LXC2|I1LXC2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21225
PE,76.6,0.00000000005,seg,NULL,
NODE_26488_length_367_cov_89.874657.path2.1
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42250.1                                                        61   3e-10
Glyma13g09390.1                                                        60   6e-10
Glyma06g12570.1                                                        60   7e-10

>Glyma04g42250.1 
          Length = 514

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/33 (87%), Positives = 32/33 (96%)

Query: 15  LLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 47
           L+GQTQNLSLNSSTPTKQ+K EDALFKDL+DFA
Sbjct: 468 LVGQTQNLSLNSSTPTKQQKPEDALFKDLVDFA 500


>Glyma13g09390.1 
          Length = 508

 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/33 (87%), Positives = 30/33 (90%)

Query: 15  LLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 47
           LL QTQNLSLNSSTPTKQEK ED LFKDL+DFA
Sbjct: 462 LLAQTQNLSLNSSTPTKQEKTEDVLFKDLVDFA 494


>Glyma06g12570.1 
          Length = 512

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 28/33 (84%), Positives = 32/33 (96%)

Query: 15  LLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 47
           L+GQTQNLSLNSS+PTKQ+K EDALFKDL+DFA
Sbjct: 466 LVGQTQNLSLNSSSPTKQQKPEDALFKDLVDFA 498