Miyakogusa Predicted Gene

Lj1g3v0246790.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0246790.1 tr|A9SK71|A9SK71_PHYPA Qc-SNARE, plant
SFT1-family OS=Physcomitrella patens subsp. patens GN=SFT1
PE,48.04,2e-19,T_SNARE,Target SNARE coiled-coil domain; SNARE,Target
SNARE coiled-coil domain; no
description,NULL;,NODE_53512_length_859_cov_76.688011.path2.1
         (132 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g35710.1                                                       243   4e-65
Glyma02g37440.1                                                       241   2e-64
Glyma06g10370.2                                                       211   2e-55
Glyma06g10370.1                                                       185   1e-47
Glyma04g10510.2                                                       119   1e-27
Glyma04g10510.1                                                        90   8e-19

>Glyma14g35710.1 
          Length = 132

 Score =  243 bits (620), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 123/132 (93%)

Query: 1   MAANSQRPGSFYGGAAPYRSSDGLSTRPGAASEEIQLRIDPMDLDDELTGLHSQVRRLKN 60
           MAANS R GS YGGAAPYRS DGLSTRP  ASEEIQLRIDP+DLDDE+TGLH QVRRLK+
Sbjct: 1   MAANSHRLGSSYGGAAPYRSRDGLSTRPVGASEEIQLRIDPLDLDDEITGLHRQVRRLKH 60

Query: 61  VAQEIGTEVKYQKDFLEQLQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIVHVILFALVCF 120
           VA+EIGTEVKYQK FLE+LQMTMIKAQAGVKNNLRRLNKSI+QSGSNHI+HVI+FALVCF
Sbjct: 61  VAEEIGTEVKYQKTFLEELQMTMIKAQAGVKNNLRRLNKSIVQSGSNHIIHVIIFALVCF 120

Query: 121 FIVYLWSKMSRK 132
           F+VYLWSKM RK
Sbjct: 121 FVVYLWSKMFRK 132


>Glyma02g37440.1 
          Length = 132

 Score =  241 bits (615), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 114/132 (86%), Positives = 122/132 (92%)

Query: 1   MAANSQRPGSFYGGAAPYRSSDGLSTRPGAASEEIQLRIDPMDLDDELTGLHSQVRRLKN 60
           M ANS R GS YGGAAPYRS DGLS RP  ASEEIQLRIDP+DLDDE+TGLH QVRRLK+
Sbjct: 1   MVANSHRVGSSYGGAAPYRSRDGLSPRPVGASEEIQLRIDPLDLDDEITGLHRQVRRLKH 60

Query: 61  VAQEIGTEVKYQKDFLEQLQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIVHVILFALVCF 120
           VA+EIGTEVKYQK+FLE+LQMTMIKAQAGVKNNLRRLNKSIIQSGSNHI+HVILFALVCF
Sbjct: 61  VAEEIGTEVKYQKNFLEELQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIIHVILFALVCF 120

Query: 121 FIVYLWSKMSRK 132
           F+VYLWSKM RK
Sbjct: 121 FVVYLWSKMIRK 132


>Glyma06g10370.2 
          Length = 133

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 98/133 (73%), Positives = 119/133 (89%), Gaps = 1/133 (0%)

Query: 1   MAANSQRPGSFYGGAAPYRSSDGLSTRPGAASEEIQLRIDP-MDLDDELTGLHSQVRRLK 59
           M+++S +  SFYG AAPYRS +GLSTRP A+S+EIQL IDP +D DDE+TGL  QV++LK
Sbjct: 1   MSSHSHKGTSFYGDAAPYRSREGLSTRPVASSDEIQLHIDPGIDFDDEITGLRGQVKKLK 60

Query: 60  NVAQEIGTEVKYQKDFLEQLQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIVHVILFALVC 119
           NVA+EIG+EVK+Q+DFLEQ+QM MI+AQAGVKNNLRRLNKSI+++GSN+IVHVI FALVC
Sbjct: 61  NVAEEIGSEVKFQRDFLEQVQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALVC 120

Query: 120 FFIVYLWSKMSRK 132
           FFIVY WSKMSRK
Sbjct: 121 FFIVYFWSKMSRK 133


>Glyma06g10370.1 
          Length = 142

 Score =  185 bits (469), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 87/126 (69%), Positives = 106/126 (84%), Gaps = 1/126 (0%)

Query: 8   PGSFYGGAAPYRSSDGLSTRPGAASEEIQLRIDP-MDLDDELTGLHSQVRRLKNVAQEIG 66
           P   +   +     +GLSTRP A+S+EIQL IDP +D DDE+TGL  QV++LKNVA+EIG
Sbjct: 17  PFLLFNSISCVNCREGLSTRPVASSDEIQLHIDPGIDFDDEITGLRGQVKKLKNVAEEIG 76

Query: 67  TEVKYQKDFLEQLQMTMIKAQAGVKNNLRRLNKSIIQSGSNHIVHVILFALVCFFIVYLW 126
           +EVK+Q+DFLEQ+QM MI+AQAGVKNNLRRLNKSI+++GSN+IVHVI FALVCFFIVY W
Sbjct: 77  SEVKFQRDFLEQVQMVMIQAQAGVKNNLRRLNKSIVKNGSNNIVHVIAFALVCFFIVYFW 136

Query: 127 SKMSRK 132
           SKMSRK
Sbjct: 137 SKMSRK 142


>Glyma04g10510.2 
          Length = 80

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 56/80 (70%), Positives = 69/80 (86%), Gaps = 1/80 (1%)

Query: 1  MAANSQRPGSFYGGAAPYRSSDGLSTRPGAASEEIQLRIDP-MDLDDELTGLHSQVRRLK 59
          M++NS R  SFYG AAPYRS +GLSTRP A+S+EIQL IDP +D DDE+TGL  QVR+LK
Sbjct: 1  MSSNSHRGASFYGNAAPYRSREGLSTRPVASSDEIQLHIDPGVDFDDEITGLRGQVRKLK 60

Query: 60 NVAQEIGTEVKYQKDFLEQL 79
          NVA+EIG+EVK+Q+DFLEQ+
Sbjct: 61 NVAEEIGSEVKFQRDFLEQV 80


>Glyma04g10510.1 
          Length = 84

 Score = 89.7 bits (221), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/62 (69%), Positives = 51/62 (82%), Gaps = 1/62 (1%)

Query: 1  MAANSQRPGSFYGGAAPYRSSDGLSTRPGAASEEIQLRIDP-MDLDDELTGLHSQVRRLK 59
          M++NS R  SFYG AAPYRS +GLSTRP A+S+EIQL IDP +D DDE+TGL  QVR+LK
Sbjct: 1  MSSNSHRGASFYGNAAPYRSREGLSTRPVASSDEIQLHIDPGVDFDDEITGLRGQVRKLK 60

Query: 60 NV 61
          NV
Sbjct: 61 NV 62