Miyakogusa Predicted Gene

Lj1g3v0203190.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0203190.1 Non Chatacterized Hit- tr|Q84P89|Q84P89_ORYSJ
Putative uncharacterized protein (Fragment) OS=Oryza
s,41.98,2e-19,coiled-coil,NULL; seg,NULL,CUFF.25346.1
         (144 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09790.2                                                       150   4e-37
Glyma04g09790.1                                                       150   4e-37
Glyma06g09870.1                                                       145   1e-35
Glyma06g09870.2                                                       140   3e-34

>Glyma04g09790.2 
          Length = 172

 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/130 (63%), Positives = 91/130 (70%), Gaps = 3/130 (2%)

Query: 18  KRKTLQAVLEQCQRALELIN-NAXXXXXXXXXXXXXXXXXXXXXXXXXXQLCDLLKSRVE 76
           KRKTL+AVL QCQRALELIN  +                          +LCDLLKSRVE
Sbjct: 21  KRKTLEAVLLQCQRALELINATSSTAADVDEEDCEIEGEATASADPDADELCDLLKSRVE 80

Query: 77  CPDFLQKLECAQASVLLNAAEEGNSWDLVSENDLWEGSELD--QEDFVLVRQEDIVEGIA 134
           CP FLQ+LECAQASV  N  EEGNSWD+VS+NDLWEG   D  QED+VLVRQEDIVEGIA
Sbjct: 81  CPAFLQQLECAQASVSQNIDEEGNSWDMVSKNDLWEGERADSEQEDYVLVRQEDIVEGIA 140

Query: 135 CFLAAYLLSL 144
           CF+AAYLLSL
Sbjct: 141 CFMAAYLLSL 150


>Glyma04g09790.1 
          Length = 226

 Score =  150 bits (379), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 83/130 (63%), Positives = 91/130 (70%), Gaps = 3/130 (2%)

Query: 18  KRKTLQAVLEQCQRALELIN-NAXXXXXXXXXXXXXXXXXXXXXXXXXXQLCDLLKSRVE 76
           KRKTL+AVL QCQRALELIN  +                          +LCDLLKSRVE
Sbjct: 21  KRKTLEAVLLQCQRALELINATSSTAADVDEEDCEIEGEATASADPDADELCDLLKSRVE 80

Query: 77  CPDFLQKLECAQASVLLNAAEEGNSWDLVSENDLWEGSELD--QEDFVLVRQEDIVEGIA 134
           CP FLQ+LECAQASV  N  EEGNSWD+VS+NDLWEG   D  QED+VLVRQEDIVEGIA
Sbjct: 81  CPAFLQQLECAQASVSQNIDEEGNSWDMVSKNDLWEGERADSEQEDYVLVRQEDIVEGIA 140

Query: 135 CFLAAYLLSL 144
           CF+AAYLLSL
Sbjct: 141 CFMAAYLLSL 150


>Glyma06g09870.1 
          Length = 229

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 82/135 (60%), Positives = 90/135 (66%), Gaps = 8/135 (5%)

Query: 18  KRKTLQAVLEQCQRALELINNAXXXXXXXXXXXX------XXXXXXXXXXXXXXQLCDLL 71
           KRKTL+AVL QCQRALE IN                                  +LCDLL
Sbjct: 19  KRKTLEAVLLQCQRALESINATSATASSSASTYVDEEDYDGEGEATASADPDADELCDLL 78

Query: 72  KSRVECPDFLQKLECAQASVLLNAAEEGNSWDLVSENDLWEGSELD--QEDFVLVRQEDI 129
           KSRVECP FLQ+LECA+ASV  N  EEGNSWD+VSENDLWEG  +D  QED+VLVRQEDI
Sbjct: 79  KSRVECPAFLQQLECARASVSQNIDEEGNSWDMVSENDLWEGERVDSEQEDYVLVRQEDI 138

Query: 130 VEGIACFLAAYLLSL 144
           VEGIACF+AAYLLSL
Sbjct: 139 VEGIACFMAAYLLSL 153


>Glyma06g09870.2 
          Length = 228

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 81/135 (60%), Positives = 90/135 (66%), Gaps = 9/135 (6%)

Query: 18  KRKTLQAVLEQCQRALELINNAXXXXXXXXXXXX------XXXXXXXXXXXXXXQLCDLL 71
           KRKTL+AVL QCQRALE IN                                  +LCDLL
Sbjct: 19  KRKTLEAVLLQCQRALESINATSATASSSASTYVDEEDYDGEGEATASADPDADELCDLL 78

Query: 72  KSRVECPDFLQKLECAQASVLLNAAEEGNSWDLVSENDLWEGSELD--QEDFVLVRQEDI 129
           KSRVECP FLQ+LECA+ASV  N  +EGNSWD+VSENDLWEG  +D  QED+VLVRQEDI
Sbjct: 79  KSRVECPAFLQQLECARASVSQNI-DEGNSWDMVSENDLWEGERVDSEQEDYVLVRQEDI 137

Query: 130 VEGIACFLAAYLLSL 144
           VEGIACF+AAYLLSL
Sbjct: 138 VEGIACFMAAYLLSL 152