Miyakogusa Predicted Gene

Lj1g3v0183010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0183010.1 Non Chatacterized Hit- tr|G3NZ37|G3NZ37_GASAC
Uncharacterized protein (Fragment) OS=Gasterosteus
acu,35.58,2e-18,seg,NULL; AhpC-TSA_2,NULL,CUFF.25341.1
         (397 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g13800.1                                                       595   e-170
Glyma19g36130.1                                                        64   3e-10

>Glyma02g13800.1 
          Length = 410

 Score =  595 bits (1534), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 293/398 (73%), Positives = 337/398 (84%), Gaps = 19/398 (4%)

Query: 1   MTSFSVEEFIGNGVLKALLPKLLEEGWDDVPTLKVMDSEDMNSINMTQQQKDALGIRSYL 60
           M SFSVEEFIGNG+LK LL KLLEEGWDDVPTLK+M SEDM+ + MTQ+QKDALGIRSYL
Sbjct: 1   MASFSVEEFIGNGILKELLQKLLEEGWDDVPTLKIMSSEDMDLLQMTQEQKDALGIRSYL 60

Query: 61  HDHGLMQYADKLEASGRTLPELLRLNSMDLSSQFAMKRGHVVRFIDRTKCDDNDSFKLRA 120
           HD GLMQYADK+E  G+ L EL+ L++ DLS+QF MKRGH+ RFI+RT  DD  S KLRA
Sbjct: 61  HDRGLMQYADKMEDCGKALSELINLSTTDLSTQFEMKRGHIARFINRTTSDD--SVKLRA 118

Query: 121 IMARKRSSIVIRHNNSIPKSVATSDK---------------SLEQSLADLKIKDGHVFKG 165
           + AR+RSS + R ++SIPKSV ++                 +LEQS+AD+KIK+G+VFKG
Sbjct: 119 LAARRRSSTMHR-DDSIPKSVGSNSSNSLTRSHIRSNAASDALEQSMADMKIKEGYVFKG 177

Query: 166 IVAAEPAEARACGCVQPPP-VSDQIAPYAAIENISVQKLTPEYKIGIDPLVKMKTPPMKA 224
           IVAAEPAE RACGCV PPP +SDQ+APY  +ENISVQKLTPEYKIG++PLVK K PP+K 
Sbjct: 178 IVAAEPAEPRACGCVNPPPPISDQVAPYGTVENISVQKLTPEYKIGMEPLVKTKAPPLKV 237

Query: 225 SELWRDKPAVFLCLRRPGCIMCRAEAYKLYSRKPIFDALGVQLFAVLHEHIESEVKDFWP 284
           SELWRDKPAVFLCLRRPGCIMCRAEA++LYSRK IFDALGVQLFAVLHE I+SEVKDFWP
Sbjct: 238 SELWRDKPAVFLCLRRPGCIMCRAEAHQLYSRKAIFDALGVQLFAVLHEQIDSEVKDFWP 297

Query: 285 RYWGGAILFDRGRNFFQALGGGKLLKEKFFSGFLLNPRAIANYKRAKASGFQQNFKGEGE 344
           RYWGG +L DRGR+FF+ALGGGKLLKEKF SGFLLNPR+++NYKRAKA     NFKGEGE
Sbjct: 298 RYWGGVVLLDRGRDFFKALGGGKLLKEKFLSGFLLNPRSLSNYKRAKAMHIDYNFKGEGE 357

Query: 345 VKGGLFILGSGRSGIAYQFIERNFGDWAPLAEVIEICT 382
           +KGGLFI+G G+SGIAYQFIERNFGDWAP+AEVIEICT
Sbjct: 358 IKGGLFIIGMGKSGIAYQFIERNFGDWAPIAEVIEICT 395


>Glyma19g36130.1 
          Length = 256

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 21/169 (12%)

Query: 225 SELWRDKPAVFLCLRRPGCIMCRAEAYKLYSRKPIFDALGVQLFAVLHEHIESEVKDFWP 284
           S+LW+D+ AV    R  GC++CR  A  L S+K I DA GV L  +    I+ + K F  
Sbjct: 95  SDLWKDRKAVVAFARHFGCVLCRKRADYLSSKKDIMDASGVALVLIGPGSID-QAKSFAE 153

Query: 285 RY-WGGAILFDRGRNFFQALGGGKLLKEKFFSGFL--LNPRAIANYKRAKASGFQQNFKG 341
           +  + G I  D   + ++AL         F SG L    P A     +    G++Q++K 
Sbjct: 154 KSKFEGEIYADPTHSSYEAL--------NFVSGVLTTFTPNAGLKIIQLYMEGYRQDWKL 205

Query: 342 E---------GEVKGGLFILGSGRSGIAYQFIERNFGDWAPLAEVIEIC 381
                     G  +GG+ + G G++ I+Y   ++  GD   + ++++ C
Sbjct: 206 SFEKDTVSRGGWKQGGIIVAGPGKNNISYLHRDKEAGDDPEIEDILKAC 254