Miyakogusa Predicted Gene

Lj1g3v0178870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0178870.1 Non Chatacterized Hit- tr|B9SMY7|B9SMY7_RICCO
Lyase, putative OS=Ricinus communis GN=RCOM_0482760
PE,54.05,9e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Rhamnogal_lyase,Rhamnogalacturonate lyase,CUFF.25334.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g38050.1                                                       210   3e-55
Glyma06g09770.2                                                       177   4e-45
Glyma06g09770.1                                                       177   4e-45
Glyma04g09670.1                                                       170   4e-43
Glyma14g36200.1                                                       158   2e-39
Glyma04g09680.1                                                       152   1e-37
Glyma06g09760.1                                                       152   1e-37
Glyma08g37420.1                                                       118   1e-27
Glyma18g27090.1                                                       112   9e-26
Glyma02g38060.1                                                       110   6e-25
Glyma09g33400.1                                                       107   3e-24
Glyma08g37410.1                                                       103   5e-23
Glyma01g02560.1                                                        94   5e-20
Glyma04g09660.1                                                        78   3e-15

>Glyma02g38050.1 
          Length = 651

 Score =  210 bits (535), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/136 (74%), Positives = 111/136 (81%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           MDNGILQV  SNPGGF+T IQYNGIDNLLE LN+ +NRGYWD+VWS+AGSTGTTGT ERI
Sbjct: 17  MDNGILQVYLSNPGGFVTGIQYNGIDNLLETLNEKDNRGYWDVVWSEAGSTGTTGTFERI 76

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
           VG  F             FT+ WDPS KG  +PLNID+RYVMLRNS+GFYSYAIFEHL+E
Sbjct: 77  VGTSFNVIMENEEQVEISFTRKWDPSLKGKRAPLNIDKRYVMLRNSAGFYSYAIFEHLQE 136

Query: 121 WPAFNIPQIRIVYKLR 136
           WPAFNIPQIRIVYKLR
Sbjct: 137 WPAFNIPQIRIVYKLR 152


>Glyma06g09770.2 
          Length = 490

 Score =  177 bits (448), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 101/136 (74%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           M+NGIL+V  SNPGG +T IQYN IDNLLEVLND +NRGYWDLVWS   STGT+GT + I
Sbjct: 17  MENGILKVTLSNPGGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSPTSTGTSGTFDVI 76

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
            G  F             FT+ WD S++G L PLNID+R+VMLR SSGFYSYAI+EHL+E
Sbjct: 77  KGTTFKVVVENEDQVELSFTRTWDVSREGKLVPLNIDKRFVMLRGSSGFYSYAIYEHLEE 136

Query: 121 WPAFNIPQIRIVYKLR 136
           WPAFN+ + RI +KLR
Sbjct: 137 WPAFNLDETRIAFKLR 152


>Glyma06g09770.1 
          Length = 643

 Score =  177 bits (448), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 101/136 (74%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           M+NGIL+V  SNPGG +T IQYN IDNLLEVLND +NRGYWDLVWS   STGT+GT + I
Sbjct: 17  MENGILKVTLSNPGGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSPTSTGTSGTFDVI 76

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
            G  F             FT+ WD S++G L PLNID+R+VMLR SSGFYSYAI+EHL+E
Sbjct: 77  KGTTFKVVVENEDQVELSFTRTWDVSREGKLVPLNIDKRFVMLRGSSGFYSYAIYEHLEE 136

Query: 121 WPAFNIPQIRIVYKLR 136
           WPAFN+ + RI +KLR
Sbjct: 137 WPAFNLDETRIAFKLR 152


>Glyma04g09670.1 
          Length = 643

 Score =  170 bits (431), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 82/136 (60%), Positives = 99/136 (72%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           M+NG+L+V  SNP G +T IQYN IDNLLEVLND +NRGYWDLVWS   STGT+GT + I
Sbjct: 17  MENGMLKVTLSNPEGIVTGIQYNDIDNLLEVLNDESNRGYWDLVWSSPTSTGTSGTFDVI 76

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
            G  F             FT+ WD S +G L PLNID+R+VMLR SSGFYSYAI+EHL++
Sbjct: 77  KGTTFKVMVENEDQVELSFTRTWDVSLEGKLVPLNIDKRFVMLRGSSGFYSYAIYEHLED 136

Query: 121 WPAFNIPQIRIVYKLR 136
           WPAFN+ + RI +KLR
Sbjct: 137 WPAFNLDETRIAFKLR 152


>Glyma14g36200.1 
          Length = 380

 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/136 (62%), Positives = 92/136 (67%), Gaps = 19/136 (13%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           MDNGILQV  SNPGG +TRIQYNGIDNLLEVL+ S +RGYWD+VWS+AGSTGT GT ER 
Sbjct: 1   MDNGILQVYLSNPGGLVTRIQYNGIDNLLEVLSGSEHRGYWDVVWSEAGSTGTAGTFERY 60

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
                                MW+           +   YVMLRNSSGFYSYAIFEHL E
Sbjct: 61  Y---------FDDEFNCLQVLMWE----------QVLMLYVMLRNSSGFYSYAIFEHLAE 101

Query: 121 WPAFNIPQIRIVYKLR 136
           WPAFNIPQIRIVYKLR
Sbjct: 102 WPAFNIPQIRIVYKLR 117


>Glyma04g09680.1 
          Length = 643

 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 74/142 (52%), Positives = 93/142 (65%), Gaps = 6/142 (4%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGT------T 54
           MDNGI+QV  SNP G +T IQYNGIDNLLEVLND +NRGYWD+VW + G   T       
Sbjct: 17  MDNGIVQVNLSNPEGIVTGIQYNGIDNLLEVLNDESNRGYWDIVWDEGGKKRTKKGAKGK 76

Query: 55  GTQERIVGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAI 114
           G  +R+    F             F++ W+ S +G L PLNID+R++ML  SSGFY+YAI
Sbjct: 77  GRFDRMEATNFTVIVESEEQVELSFSRTWNDSLEGKLPPLNIDKRFIMLSGSSGFYTYAI 136

Query: 115 FEHLKEWPAFNIPQIRIVYKLR 136
           +EHLKEWPAF++   RI +K R
Sbjct: 137 YEHLKEWPAFDLDNTRIAFKPR 158


>Glyma06g09760.1 
          Length = 620

 Score =  152 bits (383), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 75/136 (55%), Positives = 89/136 (65%), Gaps = 3/136 (2%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           MDNGI+QV  SNP G +T I+YNG+DNLLEVLN   NRGYWDLVWS  GS G     + I
Sbjct: 1   MDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNKETNRGYWDLVWSAPGSKGMF---DVI 57

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
            G  F             F +MWD S +G   PLNID+R++MLR SSGFYSY I+EHL  
Sbjct: 58  KGTCFKVIVQNEEQVELSFARMWDHSLEGKFVPLNIDKRFIMLRGSSGFYSYGIYEHLNG 117

Query: 121 WPAFNIPQIRIVYKLR 136
           WP F+I + RI +KLR
Sbjct: 118 WPDFDISETRITFKLR 133


>Glyma08g37420.1 
          Length = 620

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 7/137 (5%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTT-GTQER 59
           M+NGI++V  S P G +  I YNGIDN+LE  N  NNRGY+D+VW+  GST    G Q  
Sbjct: 3   MENGIIRVSLSKPEGTVLGISYNGIDNVLERRNKFNNRGYFDIVWNAPGSTSKLWGIQ-- 60

Query: 60  IVGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLK 119
             G +F             FT+ WD     +  PLNID+RY++ R SSG Y YAIFEH K
Sbjct: 61  --GSKFSVIEASENQVEVSFTRTWD--MDSSSLPLNIDKRYILRRGSSGLYIYAIFEHPK 116

Query: 120 EWPAFNIPQIRIVYKLR 136
           ++PA  I  IRIV+KL+
Sbjct: 117 DFPALEIDHIRIVFKLQ 133


>Glyma18g27090.1 
          Length = 677

 Score =  112 bits (281), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 78/135 (57%), Gaps = 3/135 (2%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           +DNGI+ V FS P G+I  I YNGIDN+LE  N+  +RGY D+VW+  G        +RI
Sbjct: 54  VDNGIVAVTFSRPEGYILGISYNGIDNILEEENEDQDRGYLDVVWNTPGKPSNF---QRI 110

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
            G  F             F+K W  S  G+  P+NID RY++    SGFYSYAIF+  + 
Sbjct: 111 HGTIFSVIAADENMVELSFSKSWTSSLNGSSVPMNIDIRYILRSGDSGFYSYAIFDRPEG 170

Query: 121 WPAFNIPQIRIVYKL 135
            PA  I QIRIV+KL
Sbjct: 171 LPAVEIDQIRIVFKL 185


>Glyma02g38060.1 
          Length = 510

 Score =  110 bits (274), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 52/77 (67%), Positives = 57/77 (74%)

Query: 60  IVGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLK 119
           IVG  F             FT+ W+PS KG  +PLNID+RY MLRNS+GFYSYAIFEHLK
Sbjct: 1   IVGTSFNVVSENEEQVEISFTRKWNPSLKGKRAPLNIDKRYAMLRNSTGFYSYAIFEHLK 60

Query: 120 EWPAFNIPQIRIVYKLR 136
           EWPAFNIPQIRIVYKLR
Sbjct: 61  EWPAFNIPQIRIVYKLR 77


>Glyma09g33400.1 
          Length = 620

 Score =  107 bits (268), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 60/135 (44%), Positives = 77/135 (57%), Gaps = 4/135 (2%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           +DNGI+ +  SNP G I  I YNGI N+LE  N  ++RGY D+VW++ G  G     +RI
Sbjct: 3   IDNGIISLNLSNPEGDIIGI-YNGIKNVLEAKNKEDDRGYLDVVWNEPGKHGMF---QRI 58

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGFYSYAIFEHLKE 120
            G  F             F + W  S KG+  P+NID+RY++ R   GFYSYAIF     
Sbjct: 59  RGTDFSVIAANENIVEISFLRTWTASMKGSSVPMNIDKRYILRRGDYGFYSYAIFNRPSG 118

Query: 121 WPAFNIPQIRIVYKL 135
            PA  I QIRIV+KL
Sbjct: 119 LPAVEIDQIRIVFKL 133


>Glyma08g37410.1 
          Length = 667

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 11/144 (7%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           +DNGI+ V FS P G+I  I YNGI N+LE  N+  +RGY D+VW+  G        +RI
Sbjct: 36  VDNGIVAVTFSKPEGYILGISYNGIHNILEDENEDQDRGYLDVVWNTPGKPSNC---QRI 92

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDER--------YVMLRNSSGFYSY 112
            G +F             F++ W  S   +  P+NID R        Y+     SGFYSY
Sbjct: 93  YGTKFSVIAADENMVEVSFSRTWTSSMNDSSVPMNIDMRWIISLSL*YIFRNGDSGFYSY 152

Query: 113 AIFEHLKEWPAFNIPQIRIVYKLR 136
           AIF+  +  PA  I QIRIV+KL+
Sbjct: 153 AIFDRPEGLPAAEIDQIRIVFKLK 176


>Glyma01g02560.1 
          Length = 634

 Score = 93.6 bits (231), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 56/146 (38%), Positives = 76/146 (52%), Gaps = 12/146 (8%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTG--TTGTQE 58
           + NGI+ +  S P G I  I YNGI+NLLE  N  ++RGY D+VW++ G  G      + 
Sbjct: 3   ISNGIVSLNLSKPEGHIIGI-YNGINNLLEPKNKEDDRGYLDVVWNEPGKPGIFERDNKN 61

Query: 59  RI---------VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVMLRNSSGF 109
           R+           R+              F + W  S KG+  P+NID+RY++ R   GF
Sbjct: 62  RVEVINACFMQFKRQIYDLNSNENIVEISFLRTWTASMKGSSVPMNIDKRYILRRGDYGF 121

Query: 110 YSYAIFEHLKEWPAFNIPQIRIVYKL 135
           YSYAIF      PA  + QIRIV+KL
Sbjct: 122 YSYAIFNRPSGLPAVEVYQIRIVFKL 147


>Glyma04g09660.1 
          Length = 573

 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 31/140 (22%)

Query: 1   MDNGILQVQFSNPGGFITRIQYNGIDNLLEVLNDSNNRGYWDLVWSKAGSTGTTGTQERI 60
           MDNGI+QV  +NP G +T I+YNG+D+LLEVLN   NRG +       G+ GT G  +  
Sbjct: 1   MDNGIVQVTLTNPDGIVTGIRYNGVDSLLEVLNKETNRGEY-------GAPGTKGMFDVY 53

Query: 61  VGRRFXXXXXXXXXXXXXFTKMWDPSQKGNLSPLNIDERYVM----LRNSSGFYSYAIFE 116
               F                         +S +   + +++    L    GFY Y I+E
Sbjct: 54  GNTAFFCNRM--------------------VSLIRFQQLFLLIAVGLTFVDGFYPYGIYE 93

Query: 117 HLKEWPAFNIPQIRIVYKLR 136
           HL  WP F+I + RI +KLR
Sbjct: 94  HLNGWPDFDISETRITFKLR 113