Miyakogusa Predicted Gene

Lj1g3v0173650.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0173650.1 tr|G7JPZ6|G7JPZ6_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_4g123430 PE=4 SV=1,41.01,4e-19,seg,NULL; FBOX,F-box
domain, cyclin-like,56836_g.1
         (179 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09140.1                                                       147   7e-36
Glyma07g37710.1                                                       113   9e-26
Glyma02g40560.1                                                       107   6e-24
Glyma17g02920.1                                                       103   1e-22
Glyma17g02930.1                                                        95   5e-20

>Glyma17g09140.1 
          Length = 206

 Score =  147 bits (370), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/108 (66%), Positives = 83/108 (76%)

Query: 71  LLVEVVATVASHSFVDLHAIKICCKDFLDATEDSYVWRKVSLDTFPLIQWYTNDKTSSFL 130
           LLVEVVA VAS S VDL  +K CCKDFLDA+ED+YVW++VSLD FPL++W  NDK S FL
Sbjct: 1   LLVEVVARVASDSIVDLRNMKQCCKDFLDASEDNYVWQQVSLDKFPLMRWLPNDKASCFL 60

Query: 131 NRCREYGNIDSLYREGLRKIFDYQNGKIDGHEILEVAAQNGHKEAKYV 178
             CRE GNI+SLYREGL K F+Y NG I+G   L+ AA  GH EAKYV
Sbjct: 61  KCCRESGNIESLYREGLLKFFNYPNGNINGLGDLKTAALKGHIEAKYV 108


>Glyma07g37710.1 
          Length = 245

 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 58/124 (46%), Positives = 81/124 (65%), Gaps = 3/124 (2%)

Query: 57  GPYPTSSIKTLPQDLLVEVVATVASHSFVDLHAIKICCKDFLDATEDSYVWRKVSLDTFP 116
           G    ++IK+LP++L VE+ A VA+ S  D   IK+CCK+FL A ED YV+R  S++ F 
Sbjct: 15  GSVSVTTIKSLPKELQVEIFAKVATRSIFDHCMIKLCCKEFLHAAEDDYVYRHASMENFA 74

Query: 117 LI--QWYTNDKTSSFLNRCREYGNIDSLYREGLRKIFDYQNGKIDGHEILEVAAQNGHKE 174
           L+   W+T +K SSFL RCRE GN + LYREG+ + F     ++ G + L+ AA  GH +
Sbjct: 75  LVPLPWFTGNKESSFLKRCRESGNSEILYREGMLQYFTSSRVEL-GLKNLKEAALEGHDD 133

Query: 175 AKYV 178
           AKYV
Sbjct: 134 AKYV 137


>Glyma02g40560.1 
          Length = 136

 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/113 (47%), Positives = 74/113 (65%), Gaps = 1/113 (0%)

Query: 66  TLPQDLLVEVVATVASHSFVDLHAIKICCKDFLDATEDSYVWRKVSLDTFPLIQWYTNDK 125
           +LP DLL E++A  AS S +DL  IK+ CKDFL A+E + VW+ VSL+ FP   WY +  
Sbjct: 1   SLPSDLLEEIIAKAASKSSIDLVNIKLSCKDFLHASEANNVWKNVSLEDFP-SGWYPHQT 59

Query: 126 TSSFLNRCREYGNIDSLYREGLRKIFDYQNGKIDGHEILEVAAQNGHKEAKYV 178
              FL  CRE GNID LYR+G+++  +Y    + GHE L+ AA+   K+AKY+
Sbjct: 60  AIDFLQHCREKGNIDILYRDGVKEFCNYLVANVSGHEKLKYAAECDLKQAKYL 112


>Glyma17g02920.1 
          Length = 211

 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 4/125 (3%)

Query: 57  GPYPTSSIKTLPQDLLVEVVATVASHSFVDLHAIKICCKDFLDATEDSYVWRKVSLDTFP 116
           G    ++IK LP++L VE+ A VA+ S  D   IK+CCK+FL A ED+YV+R  S++ F 
Sbjct: 18  GSVSVTAIKFLPKELQVEIFAKVATRSVFDHCMIKLCCKEFLRAAEDNYVYRHASMENFA 77

Query: 117 LI--QWYT-NDKTSSFLNRCREYGNIDSLYREGLRKIFDYQNGKIDGHEILEVAAQNGHK 173
           L+   W+  N+K   FL RCRE GN + LYREG+ + F     ++ G + L+ AA  GH 
Sbjct: 78  LVPLPWFKGNNKEFPFLKRCRESGNSEILYREGMVQYFTSSMMEL-GLKNLKEAALEGHH 136

Query: 174 EAKYV 178
           +AKYV
Sbjct: 137 DAKYV 141


>Glyma17g02930.1 
          Length = 167

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 5/110 (4%)

Query: 71  LLVEVVATVASHSFVDLHAIKICCKDFLDATEDSYVWRKVSLDTFPLI--QWYTNDKTSS 128
           +LVE+ A VA+ S  DL  +K CC++FL A ED YV+R  S++ + L+  QW    K SS
Sbjct: 1   MLVEIFAKVATRSIFDLCMVKQCCREFLHAAEDDYVYRHASMENYALVPLQWL---KESS 57

Query: 129 FLNRCREYGNIDSLYREGLRKIFDYQNGKIDGHEILEVAAQNGHKEAKYV 178
           FL RC+E GN +  YREG+ + F Y   ++    + E A +  H EAKYV
Sbjct: 58  FLKRCKESGNSEFAYREGMVQYFTYSRVELGLKNLKEAALEGDHDEAKYV 107