Miyakogusa Predicted Gene

Lj1g3v0130100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0130100.1 Non Chatacterized Hit- tr|K0SJM3|K0SJM3_THAOC
Uncharacterized protein (Fragment) OS=Thalassiosira
oc,29.9,0.0000001,seg,NULL,CUFF.25267.1
         (389 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g01180.1                                                       468   e-132
Glyma01g44340.1                                                       342   3e-94

>Glyma11g01180.1 
          Length = 416

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/357 (65%), Positives = 274/357 (76%), Gaps = 5/357 (1%)

Query: 35  LLRPNATLISDSNSFQVGKPIGSYGFMNVTTVFX-XXXXXXXXXXXDFKGLKTQDVEEGS 93
           +++      ++S+SFQVG+PIG+YGF+NVT+               D  GLKTQDV EG+
Sbjct: 43  IIQAKLPFFTNSDSFQVGRPIGTYGFINVTSYSAFPSGPGTDYSLEDLGGLKTQDVGEGN 102

Query: 94  VKIRLYEGRVSQGPLRGTPVVFKV-YPXXXXXXXXXXXXXXNELNSHVFLQSSSKGISEH 152
           VKIRLYEGRVS+GPL GTPV FKV YP              NELN+H+FLQSSSKGI ++
Sbjct: 103 VKIRLYEGRVSRGPLTGTPVTFKVVYPGRRAGGVVADALAANELNTHLFLQSSSKGIGQN 162

Query: 153 LMXXXXXXXXXXXXXXXAFRDVGRYTAADYAKFASEKVSRDRASGEPSSWNRYERVQTIK 212
           L+               AFRD G+Y AADYAK ASE+VSRDR   E SSWN +E+  T K
Sbjct: 163 LVLLVGGFETTTGEQWLAFRDDGKYNAADYAKLASERVSRDR---EGSSWNPFEQGLTTK 219

Query: 213 RRQFFIIKLLHGAMRGLAYMHDHERLHQSLGPFSVALNTISEREARYLIPRLRDLAFSVD 272
           RRQ FIIK+L G M+GLAY+HDH+RLHQSLGPFSV LNTISERE  YLIPRLRDLAFSV+
Sbjct: 220 RRQNFIIKMLQGVMKGLAYLHDHDRLHQSLGPFSVVLNTISEREGSYLIPRLRDLAFSVN 279

Query: 273 IRYSELENSGSLADGLWARASRAGAFTYLEKRAFGIADDIYEAGLLFAYLAFVPFCEAGV 332
           +RY+EL++SG L +GLW RA+ AGAFT +EKRAFGIADDIYEAGL FAY+AFVPFCEAGV
Sbjct: 280 VRYTELDDSGQLVEGLWRRATGAGAFTQMEKRAFGIADDIYEAGLFFAYMAFVPFCEAGV 339

Query: 333 TDGLSLQRLLENTFQLDLEATREYCIADDRLVDGVEFLDLGNGAGWEIIQAMLNADF 389
            D LSLQRLLENTFQLDLEATREYC+ADDRLV+ VEFLDLG+GAGWE++QAMLNADF
Sbjct: 340 MDSLSLQRLLENTFQLDLEATREYCLADDRLVNAVEFLDLGDGAGWELLQAMLNADF 396


>Glyma01g44340.1 
          Length = 296

 Score =  342 bits (878), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 181/300 (60%), Positives = 208/300 (69%), Gaps = 55/300 (18%)

Query: 86  TQDVEEGSVKIRLYEGRVSQGPLRGTPVVFKVYPXXXXXXXXXXXXXXNELNSHVFLQSS 145
            QDV EG VKIRLYEGRVS+GPLR T +++ +                            
Sbjct: 42  CQDVGEGKVKIRLYEGRVSRGPLRATCLIWWL---------------------------- 73

Query: 146 SKGISEHLMXXXXXXXXXXXXXXXAFRDVGRYTAADYAKFASEKVSRDRASGEPSSWNRY 205
                                   AFRD G+Y+AADYAK ASE VSRDR   E SSWN +
Sbjct: 74  ------------------------AFRDDGKYSAADYAKIASETVSRDR---EGSSWNPF 106

Query: 206 ERVQTIKRRQFFIIKLLHGAMRGLAYMHDHERLHQSLGPFSVALNTISEREARYLIPRLR 265
           E+  T KRR+ FIIK+L G ++GLAY+HDH RLHQSLGPFSV L TISERE  YLIPRLR
Sbjct: 107 EQGLTTKRRRNFIIKMLQGVVKGLAYLHDHNRLHQSLGPFSVILITISEREGSYLIPRLR 166

Query: 266 DLAFSVDIRYSELENSGSLADGLWARASRAGAFTYLEKRAFGIADDIYEAGLLFAYLAFV 325
           DLAFSV++RY+EL++SG   +GLW RAS AGAFT +EKRAFGIADDIYEAGLLFAY+AFV
Sbjct: 167 DLAFSVNVRYTELDDSGQFTEGLWRRASGAGAFTQMEKRAFGIADDIYEAGLLFAYMAFV 226

Query: 326 PFCEAGVTDGLSLQRLLENTFQLDLEATREYCIADDRLVDGVEFLDLGNGAGWEIIQAML 385
            FCEAGV D LSLQRLLEN FQLDLEATREYC+ADDRLV+ VEFLDLG GAG E++Q  +
Sbjct: 227 LFCEAGVMDSLSLQRLLENIFQLDLEATREYCLADDRLVNAVEFLDLGAGAGAELLQVFI 286