Miyakogusa Predicted Gene

Lj1g3v0129730.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0129730.1 Non Chatacterized Hit- tr|I1JLP3|I1JLP3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,51.19,0.00000000000003,Chromo domain-like,Chromo domain-like; no
description,NULL; Chromo,Chromo domain; CHROMO_2,Chromo
do,NODE_107301_length_622_cov_7.028939.path1.1
         (85 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g13310.1                                                        82   9e-17
Glyma09g15870.1                                                        51   4e-07

>Glyma03g13310.1 
          Length = 1279

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 4/84 (4%)

Query: 3    SAEQELLVWPDKLLELRDSSAGGIEVLVQWKNLPTCENSWESVQRMQEAFPSYHLEDKVK 62
            S E EL V   ++L+ R+ + G ++VLVQW  LP CENSWES  ++ E FP + LEDKV 
Sbjct: 1082 SEEMELQVQSAEILQWREDALGNLKVLVQWDQLPACENSWESAIQILEVFPQFFLEDKVV 1141

Query: 63   LLAPGIDRI----KPPITKVYHRR 82
            LL   ID+I    KP +TKVY RR
Sbjct: 1142 LLGESIDKIKRMSKPLVTKVYVRR 1165


>Glyma09g15870.1 
          Length = 324

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 34/52 (65%)

Query: 10 VWPDKLLELRDSSAGGIEVLVQWKNLPTCENSWESVQRMQEAFPSYHLEDKV 61
          V P+K+++ R S  G  +VL++W++LP  E+SWE    MQ  FP   LEDKV
Sbjct: 22 VQPEKVMQSRISEDGRKKVLIKWEDLPQHEDSWEHADEMQTVFPQLDLEDKV 73