Miyakogusa Predicted Gene

Lj1g3v0118830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0118830.1 tr|D2VNY6|D2VNY6_NAEGR Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_70664 PE=4 SV=1,33.53,2e-16,no
description,Nucleotide-binding, alpha-beta plait; RNA-BINDING
PROTEIN,NULL; RNA recognition motif,CUFF.25259.1
         (486 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g18030.1                                                       569   e-162
Glyma16g18030.2                                                       568   e-162
Glyma08g35510.1                                                       566   e-161
Glyma15g05870.1                                                        70   8e-12
Glyma08g19130.1                                                        69   1e-11
Glyma05g00400.1                                                        55   3e-07
Glyma17g08630.1                                                        54   3e-07
Glyma05g00400.2                                                        54   3e-07

>Glyma16g18030.1 
          Length = 1066

 Score =  569 bits (1467), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/428 (69%), Positives = 310/428 (72%), Gaps = 3/428 (0%)

Query: 1   MLRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILR 60
           MLRYEFSKH+PIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGT LEKNGQILR
Sbjct: 484 MLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTMLEKNGQILR 543

Query: 61  VAYAKSILXXXXXXXXXXXXXXXXXXXXXXXTFAQQYDSVGWAPKEYNADDKQCTAPAQT 120
           VAYAKSIL                       TFAQQYDSVGWAPKEYN D KQ T P QT
Sbjct: 544 VAYAKSILGPGSGTSGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDAKQSTGPEQT 603

Query: 121 GTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ 180
           G EVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ
Sbjct: 604 GAEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ 663

Query: 181 NQNKTANSESEPSKASDGPSSKKVVISAPATTVTSIEKPXXXXXXXXXXXXXXXXXXXXX 240
           NQNK +N ESEPSK SDG  SKK VISAPAT V  +EKP                     
Sbjct: 664 NQNKASN-ESEPSKVSDGSGSKK-VISAPATAVAPVEKPASLADAVQAAATAALAAEKKE 721

Query: 241 XXXXXXXXXXSKTSILANKKKMNNVLTMWKQRSHEGQATRVALDDNQXXXXXXXXXXXXG 300
                     SK+SILANKKKMNNVLTMWKQRSHEGQATRVAL+DNQ            G
Sbjct: 722 KEKSKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVALEDNQPSVSADDRSYSSG 781

Query: 301 HSAKNKSKNETTVRESTASNLGVHTTRAQIAATDSQAQPRPVSNSLGGTLMGVIRGSGRG 360
           H AKNK KNET VRES ASN G HTT AQ AA DSQAQP+PVSNSLGGT+MGVIRGSGRG
Sbjct: 782 HYAKNKLKNETMVRESNASNPGSHTTLAQSAAIDSQAQPQPVSNSLGGTVMGVIRGSGRG 841

Query: 361 AVKSDASYXXXXXXXXXXXXXXXXNIDGQSTPTPYRTDVSALGSYTPSVTAGSGRRRFSE 420
            VK+D +Y                N+D Q+  TP+RTDVSALGSYT SV  GSGRRRFSE
Sbjct: 842 VVKAD-TYSGSTSVASSMPSLSTANVDAQTVATPFRTDVSALGSYTQSVIVGSGRRRFSE 900

Query: 421 MPHSGTVQ 428
           MPHS +  
Sbjct: 901 MPHSASTH 908


>Glyma16g18030.2 
          Length = 1029

 Score =  568 bits (1464), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 297/428 (69%), Positives = 310/428 (72%), Gaps = 3/428 (0%)

Query: 1   MLRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILR 60
           MLRYEFSKH+PIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGT LEKNGQILR
Sbjct: 484 MLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTMLEKNGQILR 543

Query: 61  VAYAKSILXXXXXXXXXXXXXXXXXXXXXXXTFAQQYDSVGWAPKEYNADDKQCTAPAQT 120
           VAYAKSIL                       TFAQQYDSVGWAPKEYN D KQ T P QT
Sbjct: 544 VAYAKSILGPGSGTSGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDAKQSTGPEQT 603

Query: 121 GTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ 180
           G EVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ
Sbjct: 604 GAEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ 663

Query: 181 NQNKTANSESEPSKASDGPSSKKVVISAPATTVTSIEKPXXXXXXXXXXXXXXXXXXXXX 240
           NQNK +N ESEPSK SDG  SKK VISAPAT V  +EKP                     
Sbjct: 664 NQNKASN-ESEPSKVSDGSGSKK-VISAPATAVAPVEKPASLADAVQAAATAALAAEKKE 721

Query: 241 XXXXXXXXXXSKTSILANKKKMNNVLTMWKQRSHEGQATRVALDDNQXXXXXXXXXXXXG 300
                     SK+SILANKKKMNNVLTMWKQRSHEGQATRVAL+DNQ            G
Sbjct: 722 KEKSKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVALEDNQPSVSADDRSYSSG 781

Query: 301 HSAKNKSKNETTVRESTASNLGVHTTRAQIAATDSQAQPRPVSNSLGGTLMGVIRGSGRG 360
           H AKNK KNET VRES ASN G HTT AQ AA DSQAQP+PVSNSLGGT+MGVIRGSGRG
Sbjct: 782 HYAKNKLKNETMVRESNASNPGSHTTLAQSAAIDSQAQPQPVSNSLGGTVMGVIRGSGRG 841

Query: 361 AVKSDASYXXXXXXXXXXXXXXXXNIDGQSTPTPYRTDVSALGSYTPSVTAGSGRRRFSE 420
            VK+D +Y                N+D Q+  TP+RTDVSALGSYT SV  GSGRRRFSE
Sbjct: 842 VVKAD-TYSGSTSVASSMPSLSTANVDAQTVATPFRTDVSALGSYTQSVIVGSGRRRFSE 900

Query: 421 MPHSGTVQ 428
           MPHS +  
Sbjct: 901 MPHSASTH 908


>Glyma08g35510.1 
          Length = 1057

 Score =  566 bits (1460), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 296/428 (69%), Positives = 310/428 (72%), Gaps = 7/428 (1%)

Query: 1   MLRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILR 60
           MLRYEFSKH+PIKDLRLVRDKFTHVSRGFAFVHFYSV+DATKALEATNGT LEKNGQILR
Sbjct: 479 MLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVDDATKALEATNGTMLEKNGQILR 538

Query: 61  VAYAKSILXXXXXXXXXXXXXXXXXXXXXXXTFAQQYDSVGWAPKEYNADDKQCTAPAQT 120
           VAYAKSIL                       TFAQQYDSVGWAPKEYN D KQ T P   
Sbjct: 539 VAYAKSILGPGSGTSGTSQSSSLAAAAIEAATFAQQYDSVGWAPKEYNPDAKQSTGP--- 595

Query: 121 GTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYIPCTDQ 180
             EVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQY PCTDQ
Sbjct: 596 --EVGAPQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNNGIWYSYDHQTQQYTPCTDQ 653

Query: 181 NQNKTANSESEPSKASDGPSSKKVVISAPATTVTSIEKPXXXXXXXXXXXXXXXXXXXXX 240
           NQNKT+N+ESEPSK SD   SKK VISAPATTV S+EKP                     
Sbjct: 654 NQNKTSNNESEPSKVSDSSESKK-VISAPATTVASVEKPASLADAVQAAAAAALAAEKKE 712

Query: 241 XXXXXXXXXXSKTSILANKKKMNNVLTMWKQRSHEGQATRVALDDNQXXXXXXXXXXXXG 300
                     SK+SILANKKKMNNVLTMWKQRSHEGQATRVAL+DNQ            G
Sbjct: 713 KEKSKEIKLASKSSILANKKKMNNVLTMWKQRSHEGQATRVALEDNQPSVSADDRSYSSG 772

Query: 301 HSAKNKSKNETTVRESTASNLGVHTTRAQIAATDSQAQPRPVSNSLGGTLMGVIRGSGRG 360
           HSAKNK KNET VRES ASN G HTT AQ+AA DS+AQPRPVSNSLGGT+MGVIRGSGRG
Sbjct: 773 HSAKNKLKNETMVRESNASNPGSHTTLAQVAAIDSRAQPRPVSNSLGGTVMGVIRGSGRG 832

Query: 361 AVKSDASYXXXXXXXXXXXXXXXXNIDGQSTPTPYRTDVSALGSYTPSVTAGSGRRRFSE 420
            VKSD +Y                N D Q+  TP+RTDVSALGSYTPS T GSGRRRFSE
Sbjct: 833 VVKSD-TYSGSTSVASSMPSLPSANADAQTFATPFRTDVSALGSYTPSATVGSGRRRFSE 891

Query: 421 MPHSGTVQ 428
           MP S +  
Sbjct: 892 MPQSASTH 899


>Glyma15g05870.1 
          Length = 405

 Score = 69.7 bits (169), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 49/79 (62%)

Query: 96  QYDSVGWAPKEYNADDKQCTAPAQTGTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGL 155
           ++D+   +  E NA  +  +    +G E GA Q+ +V+DE+SGYYY +  G+YYD NTGL
Sbjct: 316 EHDTSKPSTDENNAVSQSSSVAINSGPEGGASQNDYVYDESSGYYYSSTLGYYYDPNTGL 375

Query: 156 YYDGNNGIWYSYDHQTQQY 174
           Y    +G WYSY+ +T  Y
Sbjct: 376 YCSAASGQWYSYNEETSAY 394


>Glyma08g19130.1 
          Length = 405

 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/79 (41%), Positives = 49/79 (62%)

Query: 96  QYDSVGWAPKEYNADDKQCTAPAQTGTEVGAPQSGFVWDEASGYYYDAASGFYYDGNTGL 155
           ++D+   +  E NA  +  +    +G E GA QS +V+DE+SGYYY +  G+YYD NT L
Sbjct: 316 EHDTSKPSTDENNAVSQSSSDAINSGPEGGASQSDYVYDESSGYYYSSNLGYYYDPNTRL 375

Query: 156 YYDGNNGIWYSYDHQTQQY 174
           YY   +G WYS++ +T  Y
Sbjct: 376 YYSAASGQWYSFNEETSTY 394


>Glyma05g00400.1 
          Length = 274

 Score = 54.7 bits (130), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 2   LRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILRV 61
           LR  FSK+  + D R++ D+ T  SRGF F+ + SVE+A+ A++A +G  L  +G+ +RV
Sbjct: 58  LREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDL--HGRPIRV 115

Query: 62  AYA 64
            YA
Sbjct: 116 NYA 118


>Glyma17g08630.1 
          Length = 275

 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 2/64 (3%)

Query: 2   LRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILRV 61
           LR  FSK+  + D R++ D+ T  SRGF F+ + SVE+A+ A++A +G  L  +G+ +RV
Sbjct: 58  LREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDL--HGRPIRV 115

Query: 62  AYAK 65
            YA 
Sbjct: 116 NYAN 119


>Glyma05g00400.2 
          Length = 245

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 2   LRYEFSKHSPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNGTTLEKNGQILRV 61
           LR  FSK+  + D R++ D+ T  SRGF F+ + SVE+A+ A++A +G  L  +G+ +RV
Sbjct: 58  LREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDL--HGRPIRV 115

Query: 62  AYA 64
            YA
Sbjct: 116 NYA 118