Miyakogusa Predicted Gene

Lj1g3v0116370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0116370.1 Non Chatacterized Hit- tr|C6SW24|C6SW24_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.518
PE=2,95.07,0,PROTEASOME SUBUNIT BETA TYPE 2,NULL; PROTEASOME SUBUNIT
ALPHA/BETA,NULL; Proteasome,Proteasome, subu,CUFF.25244.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g44200.1                                                       404   e-113
Glyma20g38970.1                                                       103   1e-22
Glyma04g08200.1                                                        66   2e-11
Glyma06g08260.1                                                        66   3e-11
Glyma20g24380.1                                                        65   5e-11
Glyma10g42650.1                                                        65   5e-11
Glyma02g01700.1                                                        64   1e-10
Glyma10g01760.1                                                        63   2e-10
Glyma09g15690.1                                                        59   4e-09
Glyma04g37030.3                                                        57   2e-08
Glyma04g37030.2                                                        57   2e-08
Glyma04g37030.1                                                        57   2e-08
Glyma06g17960.1                                                        57   2e-08

>Glyma10g44200.1 
          Length = 204

 Score =  404 bits (1039), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 193/203 (95%), Positives = 198/203 (97%)

Query: 1   MECVFGLVGNGFAIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYI 60
           MECVFGLVGNGFAIV AD+SAVHSILVHKS+EDKIMLLDSHKL+AASGE GDRVQFTEYI
Sbjct: 1   MECVFGLVGNGFAIVVADSSAVHSILVHKSNEDKIMLLDSHKLIAASGEPGDRVQFTEYI 60

Query: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120
           QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGP LYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPELYYIDYI 120

Query: 121 ATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSRLVVAPPNFVIK 180
           ATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCI EIRSRLVVAPPNFVIK
Sbjct: 121 ATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 181 IVDKDGAREYAWRQSVKDTPAPA 203
           IVDKDGAREYAWR+SVKDTP P+
Sbjct: 181 IVDKDGAREYAWRESVKDTPVPS 203


>Glyma20g38970.1 
          Length = 96

 Score =  103 bits (257), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/83 (63%), Positives = 59/83 (71%), Gaps = 11/83 (13%)

Query: 1  MECVFGLVGNGFAIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYI 60
          MECVFGLVGNGFAIV AD+SAVHSILVHKS+EDKIMLLDSHKL+AASGE GD  Q T   
Sbjct: 1  MECVFGLVGNGFAIVVADSSAVHSILVHKSNEDKIMLLDSHKLIAASGEPGDSSQST--- 57

Query: 61 QKNVALYQFRNGIPLTTAAAANF 83
                  FR   P  ++  A+ 
Sbjct: 58 --------FRRTSPCISSVTASL 72


>Glyma04g08200.1 
          Length = 233

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 2/161 (1%)

Query: 3   CVFGLVGNGFAIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQK 62
            + G+  NG  ++ AD+     + V     DKI  L  +  V  SG A D    ++Y++ 
Sbjct: 16  TIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRY 75

Query: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIAT 122
            +  +  + G P T   AAN  R  L +   KN     +++ G+DK  G  +Y +    T
Sbjct: 76  FLHQHTIQLGQPATVKVAANLVR--LLSYNNKNFLETGLIVGGWDKYEGGQIYGVPLGGT 133

Query: 123 LHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCI 163
           + +      G GS +     D+ +  GM+ +EA DLV K +
Sbjct: 134 IVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAV 174


>Glyma06g08260.1 
          Length = 233

 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 2/161 (1%)

Query: 3   CVFGLVGNGFAIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQK 62
            + G+  NG  ++ AD+     + V     DKI  L  +  V  SG A D    ++Y++ 
Sbjct: 16  TIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRY 75

Query: 63  NVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIAT 122
            +  +  + G P T   AAN  R  L     KN     +++ G+DK  G  +Y +    T
Sbjct: 76  FLHQHTIQLGQPATVKVAANLVR--LLAYNNKNFLQTGLIVGGWDKYEGGQIYGVPLGGT 133

Query: 123 LHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCI 163
           + +      G GS +     D+ +  GM+ +EA DLV K +
Sbjct: 134 IVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVKKAV 174


>Glyma20g24380.1 
          Length = 237

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)

Query: 13  AIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNG 72
            +V A    + S L+  S  +KIM +D H   A SG   D     E+ +     ++F  G
Sbjct: 45  GVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYG 104

Query: 73  IPLTTAA--------AANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLH 124
            P+T  +        A  F  G+  +  R  P+ V++L+AG+D E GPSLYY D   T  
Sbjct: 105 EPMTVESTTQALCDLALRFGEGDEESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFW 161

Query: 125 KLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSRLVVAPPNFV 178
           +    A G GS  + S +   Y+  ++++EA  +    + ++    V   PN V
Sbjct: 162 QCNGKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVT--PNNV 213


>Glyma10g42650.1 
          Length = 237

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)

Query: 13  AIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNG 72
            +V A    + S L+  S  +KIM +D H   A SG   D     E+ +     ++F  G
Sbjct: 45  GVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYG 104

Query: 73  IPLTTAA--------AANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLH 124
            P+T  +        A  F  G+  +  R  P+ V++L+AG+D E GPSLYY D   T  
Sbjct: 105 EPMTVESTTQALCDLALRFGEGDEESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFW 161

Query: 125 KLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSRLVVAPPNFV 178
           +    A G GS  + S +   Y+  ++++EA  +    + ++    V   PN V
Sbjct: 162 QCNGKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVT--PNNV 213


>Glyma02g01700.1 
          Length = 237

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 13/174 (7%)

Query: 13  AIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNG 72
            +V A    + S L+  S  +KIM +D H   A SG   D     E+ +     ++F  G
Sbjct: 45  GVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYG 104

Query: 73  IPLTTAA--------AANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLH 124
            P+T  +        A  F  G+  +  R  P+ V++L+AG+D E GPSLYY D   T  
Sbjct: 105 EPMTVESTTQALCDLALRFGEGDEESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFW 161

Query: 125 KLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSRLVVAPPNFV 178
           +    A G GS  + S +   ++  ++++EA  +    + ++    V   PN V
Sbjct: 162 QCNAKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVT--PNNV 213


>Glyma10g01760.1 
          Length = 237

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 13/174 (7%)

Query: 13  AIVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNG 72
            +V A    + S L+  S  +KIM +D H   A SG   D     E+ +     ++F  G
Sbjct: 45  GVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYG 104

Query: 73  IPLTTAA--------AANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLH 124
            P+T  +        A  F  G+  +  R  P+ V++L+AG+D E GPSLYY D   T  
Sbjct: 105 EPMTVESTTQALCDLALRFGEGDEESMSR--PFGVSLLIAGHD-ENGPSLYYTDPSGTFW 161

Query: 125 KLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSRLVVAPPNFV 178
           +    A G GS  + S +   +   ++++EA  +    + ++    V   PN V
Sbjct: 162 QCNGKAIGSGSEGADSSLQEQFSKDLTLQEAETIALSILKQVMEEKVT--PNNV 213


>Glyma09g15690.1 
          Length = 29

 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 26/27 (96%), Positives = 27/27 (100%)

Query: 172 VAPPNFVIKIVDKDGAREYAWRQSVKD 198
           VAPPNFVIKIVDKDGAREYAWR+SVKD
Sbjct: 3   VAPPNFVIKIVDKDGAREYAWRESVKD 29


>Glyma04g37030.3 
          Length = 272

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 14  IVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNGI 73
           +VAAD+ A     +      KI+ ++ + L   +G A D   +   +     L++  N  
Sbjct: 68  MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127

Query: 74  PLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGY 133
            ++   A+      +  + R    SV  ++AG+D ETGP LYY+D      K  + + G 
Sbjct: 128 RISVTGASKLL-ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGS 185

Query: 134 GSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSR 169
           GS ++  ++D  Y   +SVEEA +L  + I+    R
Sbjct: 186 GSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFR 221


>Glyma04g37030.2 
          Length = 272

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 14  IVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNGI 73
           +VAAD+ A     +      KI+ ++ + L   +G A D   +   +     L++  N  
Sbjct: 68  MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127

Query: 74  PLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGY 133
            ++   A+      +  + R    SV  ++AG+D ETGP LYY+D      K  + + G 
Sbjct: 128 RISVTGASKLL-ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGS 185

Query: 134 GSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSR 169
           GS ++  ++D  Y   +SVEEA +L  + I+    R
Sbjct: 186 GSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFR 221


>Glyma04g37030.1 
          Length = 272

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 14  IVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNGI 73
           +VAAD+ A     +      KI+ ++ + L   +G A D   +   +     L++  N  
Sbjct: 68  MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127

Query: 74  PLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGY 133
            ++   A+      +  + R    SV  ++AG+D ETGP LYY+D      K  + + G 
Sbjct: 128 RISVTGASKLL-ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGS 185

Query: 134 GSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSR 169
           GS ++  ++D  Y   +SVEEA +L  + I+    R
Sbjct: 186 GSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFR 221


>Glyma06g17960.1 
          Length = 272

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 14  IVAADTSAVHSILVHKSDEDKIMLLDSHKLVAASGEAGDRVQFTEYIQKNVALYQFRNGI 73
           +VAAD+ A     +      KI+ ++ + L   +G A D   +   +     L++  N  
Sbjct: 68  MVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKR 127

Query: 74  PLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYIATLHKLEKGAFGY 133
            ++   A+      +  + R    SV  ++AG+D ETGP LYY+D      K  + + G 
Sbjct: 128 RISVTGASKLL-ANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSEGGRLKGTRFSVGS 185

Query: 134 GSYFSLSMMDRHYHSGMSVEEAIDLVDKCIHEIRSR 169
           GS ++  ++D  Y   +SVEEA +L  + I+    R
Sbjct: 186 GSPYAYGVLDSGYRYDLSVEEAAELARRAIYHATFR 221