Miyakogusa Predicted Gene

Lj1g3v0112700.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0112700.2 Non Chatacterized Hit- tr|B9S4N1|B9S4N1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,33.53,0.000000003,tify,Tify; CCT_2,CO/COL/TOC1, conserved site; no
description,Tify; TIFY,Tify; seg,NULL,CUFF.25219.2
         (340 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g38970.1                                                       379   e-105
Glyma20g28840.1                                                       177   2e-44

>Glyma10g38970.1 
          Length = 337

 Score =  379 bits (972), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/341 (62%), Positives = 227/341 (66%), Gaps = 9/341 (2%)

Query: 1   MNGGXXXXXXXXXFRSILDKPLKHLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 60
           MNGG         FRSILDKPL  LTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ
Sbjct: 1   MNGGATTAT----FRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 56

Query: 61  VISLKALLEPTDEDXXXXXXXXXXXXXXXXXXXXXGRNLNXXXXXXXXXXXXXXXXXXXX 120
           VISLKALLEP+D+D                       +                      
Sbjct: 57  VISLKALLEPSDDDTPPPPPPAMHHRSHAQPQPQVNLSEPPPPPPKAPPPEEPAFHAAED 116

Query: 121 PQKSPSA-EKLPETNDAN--VVSPRGCASSGSFGQMTIFYCGKVNVYDGVSPDKARSIMQ 177
            QKS S+ EK  ETND N  V SP+GCA+SGSFGQMTIFYCGKVNVYD VSPDKAR+IMQ
Sbjct: 117 IQKSASSGEKPTETNDTNTNVASPKGCATSGSFGQMTIFYCGKVNVYDRVSPDKARAIMQ 176

Query: 178 LAASPVQCPQDDPSNKNAAVWASTCPSLMDKDALFPVDTAILQVAQTDKMVEYPLQYREK 237
           LA SPVQ  QDDP N NAAVW S C   MDKD L PVDT ILQVAQ DKMVEYPLQYREK
Sbjct: 177 LATSPVQLTQDDPLNGNAAVWTSPCHLPMDKDVLVPVDTTILQVAQADKMVEYPLQYREK 236

Query: 238 VSIPRDADVEGQASRKVSVQRYLEXXXXXXXXXXXXSTSVTSSNFDMYVNLPVKGHAXXX 297
            SI RDADVEGQ  RKVS+QRYLE             T +TSSNF+MY+NLPVK H+   
Sbjct: 237 GSIARDADVEGQEHRKVSLQRYLEKRKDRGRLKGKKLTGITSSNFEMYLNLPVKVHSSNG 296

Query: 298 XXXXXXXXXPPQPRLPVVSGGSADNQLKVSLPIDLNDKDVQ 338
                    PPQPRLP+VS GS  +QLKV+LPIDLNDKDVQ
Sbjct: 297 NSSRSSTSSPPQPRLPLVSSGS--DQLKVALPIDLNDKDVQ 335


>Glyma20g28840.1 
          Length = 270

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/230 (48%), Positives = 119/230 (51%), Gaps = 39/230 (16%)

Query: 1   MNGGXXXXXXXXXFRSILDKPLKHLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 60
           MNGG         FRSILDKPL  LTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ
Sbjct: 33  MNGGATTAT----FRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQ 88

Query: 61  VISLKALLEPTDEDXXXXXXXXXXXXXXXXXXXXXGR-NLNXXXXXXXXXXXXXXXXXXX 119
           VISLKALLEP+D+D                      + NL                    
Sbjct: 89  VISLKALLEPSDDDTPPPTAMHHRSHAPPPPPQPQSQVNLTEPPPPPKAPPPEESSFHAA 148

Query: 120 XPQKSP--SAEKLPETNDANVVSPRGCASSGSFGQMTIFYCGKVNVYDGVSPDKARSIMQ 177
              + P  S EK  ETND N                                  AR+IMQ
Sbjct: 149 EDIQKPASSGEKPSETNDTNT--------------------------------NARAIMQ 176

Query: 178 LAASPVQCPQDDPSNKNAAVWASTCPSLMDKDALFPVDTAILQVAQTDKM 227
           LA SPVQ  QDDPSN NAAVW S C   MDKD L PVDT ILQVAQ+ K+
Sbjct: 177 LAVSPVQFTQDDPSNGNAAVWPSPCHLPMDKDVLIPVDTTILQVAQSVKV 226



 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 30/46 (65%), Positives = 32/46 (69%)

Query: 290 VKGHAXXXXXXXXXXXXPPQPRLPVVSGGSADNQLKVSLPIDLNDK 335
           VK HA            PPQPRLP+VS GSADNQLKV+LPIDLNDK
Sbjct: 224 VKVHASNGNSSRSSTSSPPQPRLPLVSSGSADNQLKVALPIDLNDK 269