Miyakogusa Predicted Gene

Lj1g3v0096370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0096370.1 Non Chatacterized Hit- tr|A3C4Z6|A3C4Z6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,29.3,0.0000000003,seg,NULL,CUFF.25199.1
         (276 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g00840.1                                                       305   2e-83
Glyma01g44770.1                                                       236   2e-62
Glyma01g44770.4                                                       207   1e-53
Glyma01g44770.5                                                       194   1e-49
Glyma01g44770.3                                                       163   1e-40
Glyma01g44770.2                                                       161   6e-40

>Glyma11g00840.1 
          Length = 264

 Score =  305 bits (782), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 174/274 (63%), Positives = 196/274 (71%), Gaps = 15/274 (5%)

Query: 1   MGDALFDLEQVLITKRGKLSIEEARVIPSCKSNAVRDLTVGALAGGTAVWAATWKLSKPF 60
           MG+ALFDLEQVL++K+  L+ +EA ++ SCKS ++RD T GALA GTA WAATWKLSKPF
Sbjct: 1   MGEALFDLEQVLMSKKEILTPQEADILLSCKSKSLRDFTAGALAAGTAAWAATWKLSKPF 60

Query: 61  RINLSAGAGVFFGLWMLERSLYSCVDHILTLDGTILQKELANIMVTKYHDKPSVMQLISK 120
           RINLSAGAG F GLWML RSLYSC D ILT+DG+ILQKELANIMVTKY   PS+MQLISK
Sbjct: 61  RINLSAGAGAFCGLWMLSRSLYSCADQILTMDGSILQKELANIMVTKYQSDPSLMQLISK 120

Query: 121 HFYSERLFDDSTSNTPKFRWRYRNFYSDNVVHGQTTHDPDSYDKSQGDSHNDSYEKSQGD 180
           HFYSER+FDDSTSN PK RWRYRNF+SDN VHG  THD +S DKSQ  SHNDS +KS G 
Sbjct: 121 HFYSERIFDDSTSNNPKLRWRYRNFFSDNAVHGHRTHDRESNDKSQEHSHNDSNDKSLG- 179

Query: 181 SLNDSSGKSKSKSENVTGSKKSNLETKQIFTKPGTDIMSEVDPLDCLFGYGGAPVEEIRG 240
                       SENVT SK++NLETK+ F     DIMSE DPLDCLF Y   PVE+I  
Sbjct: 180 -----------WSENVTHSKRTNLETKRTFE--NADIMSEGDPLDCLFSY-APPVEDIHH 225

Query: 241 PNTSNKQSGTXXXXXXXXXXXXXXXXXXDLSNSE 274
            N+ NK SG                   DLSNSE
Sbjct: 226 SNSPNKPSGIHNRARRRSHRRRRMRNHDDLSNSE 259


>Glyma01g44770.1 
          Length = 255

 Score =  236 bits (602), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/271 (51%), Positives = 166/271 (61%), Gaps = 25/271 (9%)

Query: 4   ALFDLEQVLITKRGKLSIEEARVIPSCKSNAVRDLTVGALAGGTAVWAATWKLSKPFRIN 63
           AL +L++VL +K+  L+  EA ++ S KS ++ DL  GAL G  A  AATWKL+  FRI 
Sbjct: 5   ALLELDRVLKSKKEMLTPREANILLSWKSKSLMDLAAGALGGTAAAGAATWKLNGLFRIC 64

Query: 64  LSAGAGVFFGLWMLERSLYSCVDHILTLDGTILQKELANIMVTKYHDKPSVMQLISKHFY 123
           LSAG G + G WM  RS YS  D ILT+DG+ILQKELANI VTKY + P +M+LISKH Y
Sbjct: 65  LSAGFGTYCGPWMFNRSSYSHADQILTMDGSILQKELANITVTKYQNDPLLMRLISKHLY 124

Query: 124 SERLFDDSTSNTPKFRWRYRNFYSDNVVHGQTTHDPDSYDKSQGDSHNDSYEKSQGDSLN 183
            ER+FDDSTSN P  RWRYRNF+SDN V+G  THD +S DKSQG                
Sbjct: 125 LERIFDDSTSNNPTLRWRYRNFFSDNAVNGHRTHDRESNDKSQG---------------- 168

Query: 184 DSSGKSKSKSENVTGSKKSNLETKQIFTKPGTDIMSEVDPLDCLFGYGGAPVEEIRGPNT 243
                   +SENVT SK++NL+TK+ F     DIMSE DPLDCLFGY   PVEEI   N 
Sbjct: 169 --------RSENVTDSKRTNLKTKRTFKNASPDIMSEGDPLDCLFGY-APPVEEIHHSNF 219

Query: 244 SNKQSGTXXXXXXXXXXXXXXXXXXDLSNSE 274
            NK SG                   DLSNSE
Sbjct: 220 PNKPSGIHNRARRKSHRRRRMHNHEDLSNSE 250


>Glyma01g44770.4 
          Length = 236

 Score =  207 bits (527), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/271 (48%), Positives = 156/271 (57%), Gaps = 44/271 (16%)

Query: 4   ALFDLEQVLITKRGKLSIEEARVIPSCKSNAVRDLTVGALAGGTAVWAATWKLSKPFRIN 63
           AL +L++VL +K+  L+  EA ++ S KS ++ DL  GAL G  A  AATWKL+  FRI 
Sbjct: 5   ALLELDRVLKSKKEMLTPREANILLSWKSKSLMDLAAGALGGTAAAGAATWKLNGLFRIC 64

Query: 64  LSAGAGVFFGLWMLERSLYSCVDHILTLDGTILQKELANIMVTKYHDKPSVMQLISKHFY 123
           LSA                   D ILT+DG+ILQKELANI VTKY + P +M+LISKH Y
Sbjct: 65  LSA-------------------DQILTMDGSILQKELANITVTKYQNDPLLMRLISKHLY 105

Query: 124 SERLFDDSTSNTPKFRWRYRNFYSDNVVHGQTTHDPDSYDKSQGDSHNDSYEKSQGDSLN 183
            ER+FDDSTSN P  RWRYRNF+SDN V+G  THD +S DKSQG                
Sbjct: 106 LERIFDDSTSNNPTLRWRYRNFFSDNAVNGHRTHDRESNDKSQG---------------- 149

Query: 184 DSSGKSKSKSENVTGSKKSNLETKQIFTKPGTDIMSEVDPLDCLFGYGGAPVEEIRGPNT 243
                   +SENVT SK++NL+TK+ F     DIMSE DPLDCLFGY   PVEEI   N 
Sbjct: 150 --------RSENVTDSKRTNLKTKRTFKNASPDIMSEGDPLDCLFGY-APPVEEIHHSNF 200

Query: 244 SNKQSGTXXXXXXXXXXXXXXXXXXDLSNSE 274
            NK SG                   DLSNSE
Sbjct: 201 PNKPSGIHNRARRKSHRRRRMHNHEDLSNSE 231


>Glyma01g44770.5 
          Length = 179

 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 105/199 (52%), Positives = 119/199 (59%), Gaps = 25/199 (12%)

Query: 76  MLERSLYSCVDHILTLDGTILQKELANIMVTKYHDKPSVMQLISKHFYSERLFDDSTSNT 135
           M  RS YS  D ILT+DG+ILQKELANI VTKY + P +M+LISKH Y ER+FDDSTSN 
Sbjct: 1   MFNRSSYSHADQILTMDGSILQKELANITVTKYQNDPLLMRLISKHLYLERIFDDSTSNN 60

Query: 136 PKFRWRYRNFYSDNVVHGQTTHDPDSYDKSQGDSHNDSYEKSQGDSLNDSSGKSKSKSEN 195
           P  RWRYRNF+SDN V+G  THD +S DKSQG                        +SEN
Sbjct: 61  PTLRWRYRNFFSDNAVNGHRTHDRESNDKSQG------------------------RSEN 96

Query: 196 VTGSKKSNLETKQIFTKPGTDIMSEVDPLDCLFGYGGAPVEEIRGPNTSNKQSGTXXXXX 255
           VT SK++NL+TK+ F     DIMSE DPLDCLFGY   PVEEI   N  NK SG      
Sbjct: 97  VTDSKRTNLKTKRTFKNASPDIMSEGDPLDCLFGY-APPVEEIHHSNFPNKPSGIHNRAR 155

Query: 256 XXXXXXXXXXXXXDLSNSE 274
                        DLSNSE
Sbjct: 156 RKSHRRRRMHNHEDLSNSE 174


>Glyma01g44770.3 
          Length = 174

 Score =  163 bits (413), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/209 (48%), Positives = 127/209 (60%), Gaps = 43/209 (20%)

Query: 4   ALFDLEQVLITKRGKLSIEEARVIPSCKSNAVRDLTVGALAGGTAVWAATWKLSKPFRIN 63
           AL +L++VL +K+  L+  EA ++ S KS ++ DL  GAL G  A  AATWKL+  FRI 
Sbjct: 5   ALLELDRVLKSKKEMLTPREANILLSWKSKSLMDLAAGALGGTAAAGAATWKLNGLFRIC 64

Query: 64  LSAGAGVFFGLWMLERSLYSCVDHILTLDGTILQKELANIMVTKYHDKPSVMQLISKHFY 123
           LSA                   D ILT+DG+ILQKELANI VTKY + P +M+LISKH Y
Sbjct: 65  LSA-------------------DQILTMDGSILQKELANITVTKYQNDPLLMRLISKHLY 105

Query: 124 SERLFDDSTSNTPKFRWRYRNFYSDNVVHGQTTHDPDSYDKSQGDSHNDSYEKSQGDSLN 183
            ER+FDDSTSN P  RWRYRNF+SDN V+G  THD +S DKSQG                
Sbjct: 106 LERIFDDSTSNNPTLRWRYRNFFSDNAVNGHRTHDRESNDKSQG---------------- 149

Query: 184 DSSGKSKSKSENVTGSKKSNLETKQIFTK 212
                   +SENVT SK++NL+TK+ F K
Sbjct: 150 --------RSENVTDSKRTNLKTKRTFVK 170


>Glyma01g44770.2 
          Length = 182

 Score =  161 bits (408), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/208 (48%), Positives = 126/208 (60%), Gaps = 43/208 (20%)

Query: 4   ALFDLEQVLITKRGKLSIEEARVIPSCKSNAVRDLTVGALAGGTAVWAATWKLSKPFRIN 63
           AL +L++VL +K+  L+  EA ++ S KS ++ DL  GAL G  A  AATWKL+  FRI 
Sbjct: 5   ALLELDRVLKSKKEMLTPREANILLSWKSKSLMDLAAGALGGTAAAGAATWKLNGLFRIC 64

Query: 64  LSAGAGVFFGLWMLERSLYSCVDHILTLDGTILQKELANIMVTKYHDKPSVMQLISKHFY 123
           LSA                   D ILT+DG+ILQKELANI VTKY + P +M+LISKH Y
Sbjct: 65  LSA-------------------DQILTMDGSILQKELANITVTKYQNDPLLMRLISKHLY 105

Query: 124 SERLFDDSTSNTPKFRWRYRNFYSDNVVHGQTTHDPDSYDKSQGDSHNDSYEKSQGDSLN 183
            ER+FDDSTSN P  RWRYRNF+SDN V+G  THD +S DKSQG                
Sbjct: 106 LERIFDDSTSNNPTLRWRYRNFFSDNAVNGHRTHDRESNDKSQG---------------- 149

Query: 184 DSSGKSKSKSENVTGSKKSNLETKQIFT 211
                   +SENVT SK++NL+TK+ F 
Sbjct: 150 --------RSENVTDSKRTNLKTKRTFV 169