Miyakogusa Predicted Gene

Lj1g3v0084880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0084880.1 Non Chatacterized Hit- tr|I3S562|I3S562_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,45,1e-18,seg,NULL; coiled-coil,NULL; Translational machinery
components,NULL; STRUCTURAL CONSTITUENT OF RIBOS,CUFF.25193.1
         (346 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g00790.1                                                       346   3e-95
Glyma01g44860.1                                                       259   3e-69
Glyma04g14470.2                                                        99   5e-21
Glyma04g14470.1                                                        98   1e-20
Glyma06g46620.2                                                        97   2e-20
Glyma06g46620.1                                                        97   2e-20
Glyma12g00280.1                                                        86   6e-17
Glyma08g25990.1                                                        84   2e-16

>Glyma11g00790.1 
          Length = 272

 Score =  346 bits (887), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 176/264 (66%), Positives = 203/264 (76%), Gaps = 13/264 (4%)

Query: 70  TSGFDI-ELVDRDAWGISSGVAQAWR-AASEASSADKQATSEDQRQNEVEGELDFEELDN 127
           T+GF I +LVD DAW +SSGVAQAWR  AS A+++     + +   + VEGELDFE++DN
Sbjct: 6   TAGFTITQLVDHDAWAVSSGVAQAWREPASRATTSFGPQVTGEALDDHVEGELDFEDIDN 65

Query: 128 MRIRGNLFFKLERSSKEFEEYNLEFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPKDQ 187
           MR+RGNLF+KLERSSKEFEEYNL+FH                            V  KD 
Sbjct: 66  MRVRGNLFYKLERSSKEFEEYNLDFHRKKSSKRKEEVNKAKTTPN---------VVSKDH 116

Query: 188 KVPKVRELTRSNSVIEPRMDETKDVSPLNKRQRNPTFNQLTGPYHEPFCLDIFISNASVR 247
           K+PKV ELTRS SV+ PR+D+  D S +NKRQR PTFNQLTGPYHEPFCLDIFIS ASVR
Sbjct: 117 KLPKVDELTRSKSVV-PRVDDINDGSTVNKRQRTPTFNQLTGPYHEPFCLDIFISKASVR 175

Query: 248 ACIIHRVTSQVVAVAHSISKDIKFDLANSTKSKTTCAAVGAILAQRALADDIHDVIYTPR 307
           AC++HRVTS+VVAVAHSISKD KFDLA STK+KTTCAAVGAILAQRALADDIHD++YTPR
Sbjct: 176 ACVVHRVTSKVVAVAHSISKDFKFDLA-STKNKTTCAAVGAILAQRALADDIHDIVYTPR 234

Query: 308 KGNRVEGKLQIVLHSIMNNGINVK 331
           KG RVEGKLQIVL SI++NGINVK
Sbjct: 235 KGERVEGKLQIVLQSIIDNGINVK 258


>Glyma01g44860.1 
          Length = 213

 Score =  259 bits (663), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/238 (60%), Positives = 162/238 (68%), Gaps = 27/238 (11%)

Query: 81  DAWGISSGVAQAWRA--ASEASSADKQATSEDQRQNEVEGELDFEELDNMRIRGNLFFKL 138
           DAWG+SSGVAQAWR   +   +S   Q T E          LD    D + + G+LF+K 
Sbjct: 1   DAWGVSSGVAQAWRELESRAITSFGPQVTDE---------ALD----DRVEVCGDLFYKF 47

Query: 139 ERSSKEFEEYNLEFHXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPKDQKVPKVRELTRS 198
           ERSSKEFEEYNL+ H                            V  KD K+P+V ELTRS
Sbjct: 48  ERSSKEFEEYNLDLHRKKSFKKKEELNKAKTTPN---------VVSKDHKLPRVNELTRS 98

Query: 199 NSVIEPRMDETKDVSPLNKRQRNPTFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQV 258
            SV+ PR++E  D S +NKRQR PTFNQLTGPYHEP CLDIF+S A VRACI+HRVTS+V
Sbjct: 99  KSVV-PRVEEINDGSTVNKRQRTPTFNQLTGPYHEPLCLDIFVSKAWVRACIVHRVTSKV 157

Query: 259 VAVAHSISKDIKFDLANSTKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKL 316
           VAVAHSISK IKFDLA STK+KTTCAAVGAILAQRALADDIHDVIYTPRK  RVEGKL
Sbjct: 158 VAVAHSISKGIKFDLA-STKNKTTCAAVGAILAQRALADDIHDVIYTPRK-ERVEGKL 213


>Glyma04g14470.2 
          Length = 148

 Score = 99.4 bits (246), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 5/120 (4%)

Query: 216 NKRQRNP----TFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQVVAVAHSISKDIKF 271
            K+ +NP    +F Q T  Y EPF LD+FIS   V A + HRVTS+ VAVA + SKDIK 
Sbjct: 26  GKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 85

Query: 272 DLANSTKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKLQIVLHSIMNNGINVK 331
            L  S      C A+G ILA+RA   D++   YTPR  ++ EGK++ V+ S+++NGI++K
Sbjct: 86  VL-RSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDIK 144


>Glyma04g14470.1 
          Length = 187

 Score = 98.2 bits (243), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 5/120 (4%)

Query: 216 NKRQRNP----TFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQVVAVAHSISKDIKF 271
            K+ +NP    +F Q T  Y EPF LD+FIS   V A + HRVTS+ VAVA + SKDIK 
Sbjct: 65  GKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 124

Query: 272 DLANSTKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKLQIVLHSIMNNGINVK 331
            L  S      C A+G ILA+RA   D++   YTPR  ++ EGK++ V+ S+++NGI++K
Sbjct: 125 VL-RSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDIK 183


>Glyma06g46620.2 
          Length = 202

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 5/120 (4%)

Query: 216 NKRQRNP----TFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQVVAVAHSISKDIKF 271
            K+ +NP    +F Q T  Y EPF LD+FIS   V A + HRVTS+ VAVA + SKDIK 
Sbjct: 80  GKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 139

Query: 272 DLANSTKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKLQIVLHSIMNNGINVK 331
            L  S      C A+G ILA+RA   D++   YTPR  ++ EGK++ V+ S+++NGI++K
Sbjct: 140 VL-RSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDIK 198


>Glyma06g46620.1 
          Length = 202

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 5/120 (4%)

Query: 216 NKRQRNP----TFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQVVAVAHSISKDIKF 271
            K+ +NP    +F Q T  Y EPF LD+FIS   V A + HRVTS+ VAVA + SKDIK 
Sbjct: 80  GKKSKNPNKHISFKQRTIAYMEPFTLDVFISKRFVSASLTHRVTSKQVAVAGTNSKDIKA 139

Query: 272 DLANSTKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKLQIVLHSIMNNGINVK 331
            L  S      C A+G ILA+RA   D++   YTPR  ++ EGK++ V+ S+++NGI++K
Sbjct: 140 VL-RSRSDIPACIAIGRILAERAKEADVYTGSYTPRDRDKFEGKIRAVVQSLIDNGIDIK 198


>Glyma12g00280.1 
          Length = 197

 Score = 85.9 bits (211), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 1/112 (0%)

Query: 217 KRQRNPTFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQVVAVAHSISKDIKFDLANS 276
           K+    ++ Q T  Y  PF L++F S   + A ++HR TS+V+ VA + +KD++  L  S
Sbjct: 84  KKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLP-S 142

Query: 277 TKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKLQIVLHSIMNNGI 328
                 C  VG ++AQR++  D++ V Y PRK  R+EG+L IVL +I  NGI
Sbjct: 143 LIDHNACRVVGNLIAQRSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGI 194


>Glyma08g25990.1 
          Length = 197

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 67/112 (59%), Gaps = 1/112 (0%)

Query: 217 KRQRNPTFNQLTGPYHEPFCLDIFISNASVRACIIHRVTSQVVAVAHSISKDIKFDLANS 276
           K+    ++ Q T  Y  PF L++F S   + A ++HR TS+V+ VA + +KD++  L  S
Sbjct: 84  KKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLP-S 142

Query: 277 TKSKTTCAAVGAILAQRALADDIHDVIYTPRKGNRVEGKLQIVLHSIMNNGI 328
                 C  VG ++A+R++  D++ V Y PRK  R+EG+L IVL +I  NGI
Sbjct: 143 LIDHNACRVVGNLIAERSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGI 194