Miyakogusa Predicted Gene

Lj1g3v0074750.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0074750.1 tr|B9IJB1|B9IJB1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_825475 PE=4
SV=1,28.76,6e-18,seg,NULL,CUFF.25180.1
         (380 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g35810.1                                                       406   e-113
Glyma02g37510.1                                                       398   e-111
Glyma04g09880.1                                                       292   4e-79
Glyma08g07430.1                                                        72   9e-13
Glyma07g29970.1                                                        70   3e-12

>Glyma14g35810.1 
          Length = 378

 Score =  406 bits (1044), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 243/388 (62%), Positives = 275/388 (70%), Gaps = 27/388 (6%)

Query: 2   VGEDCGTWLPQVQFDLQSSNLNSF--GAPLHVGKQNATYAAVNPGVNVVTRNEGVNVVTS 59
           +GEDCGTW+P++ FD QS NL+SF   AP    KQ+ T AA+N G NVVT N  + V  S
Sbjct: 1   MGEDCGTWIPELHFDWQSPNLSSFDAAAPFGARKQSGTSAAMNLGANVVTSNAAMPVYAS 60

Query: 60  NETVSPSALPPLQLGSANEPHGWFYCLPRFRQGFT-PAPSSTAEVKPPASHGKSLRDESV 118
                 SALP  Q G + EPHGWFYCLPRFRQGFT PA +  A+ K PA H K L +E  
Sbjct: 61  ------SALPDSQSGHSGEPHGWFYCLPRFRQGFTMPARNFNAKEKLPAGHAKDLGEEIA 114

Query: 119 PNRDESLPQKRFLVIDQTGDQTTLIYSSRFGSPVECLASWDSKLHG-PNNLNTHNEPPLR 177
           PN +   PQK+FLVIDQTGDQTTL++SSRFG P   LASW+SKLHG  N  N +    LR
Sbjct: 115 PNGELGFPQKQFLVIDQTGDQTTLVHSSRFGGP---LASWNSKLHGFNNLNNGNELLNLR 171

Query: 178 GDVNNVVGVGPALDDKVDENQGTD--TESEMHEDTEEINALLXXXX---XXXXXXXXXVT 232
            DVN+VVG+GP L+DKVDENQ TD   ESEMHEDTEEINALL                VT
Sbjct: 172 RDVNHVVGLGPTLNDKVDENQRTDDDIESEMHEDTEEINALLYSESDGYSTEDDDDDEVT 231

Query: 233 STGHSPSTMTTHDN--PAPLLGAEEEVASSRAGEAKKRKRADGDAYGD-HMQFMDTANSL 289
           STGHSPSTMTTHD+    P  G  +EVASS  GE KKRK  DG AY D  MQFMDTANSL
Sbjct: 232 STGHSPSTMTTHDDNQEEPDRGTAKEVASS-VGETKKRKLWDG-AYDDGDMQFMDTANSL 289

Query: 290 NPNRPIDIEDDDAESRCSSD-NFSQG--EMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKD 346
           N  R  ++  DDAES+CSS  N S+G  EMGSL+GNKKMRKEKIQDVLS+LQ IVPGGKD
Sbjct: 290 NGKRLSEV-GDDAESKCSSGGNGSRGLGEMGSLSGNKKMRKEKIQDVLSILQCIVPGGKD 348

Query: 347 KDPIQLLDEAIRCLKSLKVKARALGLDA 374
           KDPI+L+DEAIRCLKSLK+KA  LGLDA
Sbjct: 349 KDPIELIDEAIRCLKSLKLKAIELGLDA 376


>Glyma02g37510.1 
          Length = 382

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 239/387 (61%), Positives = 268/387 (69%), Gaps = 21/387 (5%)

Query: 2   VGEDCGTWLPQVQFDLQSSNLNSFGA-PLHVGKQNATYAAVNPGVNVVTRNEGVNVVTSN 60
           +GEDC TW+P++ F+ QS NL+SF A P  VGKQN T AA+N G NVVTRN  +    S 
Sbjct: 1   MGEDCRTWIPELHFNWQSPNLSSFNATPFGVGKQNGTSAAMNSGANVVTRNAAMPAYAS- 59

Query: 61  ETVSPSALPPLQLGSANEPHGWFYCLPRFRQGFT-PAPSSTAEVKPPASHGKSLRDESVP 119
                SALP  QLG + EPHGWFYCLPRFRQGFT PA +  AE K PA H   L  E  P
Sbjct: 60  -----SALPHSQLGHSGEPHGWFYCLPRFRQGFTTPAQTFNAEEKLPAGHANGLGVEVAP 114

Query: 120 NRDESLPQKRFLVIDQTGDQTTLIYSSRFGSPVECLASWDSKLHGP-NNLNTHNEPPLRG 178
           NR+   PQK+ LVIDQTGDQTTL+YSSRFG PV+C  SWDSKLHG  N  N +    LR 
Sbjct: 115 NRESGFPQKQLLVIDQTGDQTTLVYSSRFGGPVDCHVSWDSKLHGSINLNNGNELLNLRR 174

Query: 179 DVNNVVGVGPALDDKVDENQGTD--TESEMHEDTEEINALLXXXX---XXXXXXXXXVTS 233
           DVN+VVG+GP LDDKV EN GTD   ESEMHEDTEEINALL                VTS
Sbjct: 175 DVNHVVGLGPTLDDKVHENTGTDDDIESEMHEDTEEINALLYSDSDGYSTEDDDDDEVTS 234

Query: 234 TGHSPSTMTTHDN--PAPLLGAEEEVASSRAGEAKKRKRADGDAYGDHMQFMDTANSLN- 290
           TGHSPSTMTTHD+    P     EEVASS  GE KKRK  DG    D++QFMDTA+SLN 
Sbjct: 235 TGHSPSTMTTHDDNQEEPHRRTAEEVASS-VGETKKRKLLDGAYDDDNLQFMDTASSLNG 293

Query: 291 PNRPIDIEDD---DAESRCSSDNFSQGEMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDK 347
             RP ++EDD      S  +S +   G MGSL+GNKKMRKEKIQDVLS+LQ IVPGGKDK
Sbjct: 294 KKRPFEVEDDAESRCSSGGNSSSRGSGGMGSLSGNKKMRKEKIQDVLSILQCIVPGGKDK 353

Query: 348 DPIQLLDEAIRCLKSLKVKARALGLDA 374
           DPI+LLDEAIRCLKSLK+KA  LGLDA
Sbjct: 354 DPIELLDEAIRCLKSLKLKAIELGLDA 380


>Glyma04g09880.1 
          Length = 325

 Score =  292 bits (748), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 186/383 (48%), Positives = 217/383 (56%), Gaps = 67/383 (17%)

Query: 2   VGEDCGTWLPQVQFDLQSSNLNSFGAPLHVGKQNATYAAVNPGVNVVTRNEGVNVVTSNE 61
           +G DCGTW+P +QF  QS NLN    PL +GK         P V                
Sbjct: 1   MGGDCGTWVPHLQFGWQSPNLN----PLDMGK---------PVVPAFVS----------- 36

Query: 62  TVSPSALPPLQLGSANEPHGWFYCLPRFRQGFTPAPSSTAEVKPPASHGKSLRDESVPNR 121
               SALP LQLG + EP GW YCLP FRQGF+PA +  AE K PA H K+  D+  P  
Sbjct: 37  ----SALPHLQLGHSYEPSGWSYCLPPFRQGFSPALNFNAEGKTPADHVKTFGDKIGPYG 92

Query: 122 DESLPQKRFLVIDQTGDQTTLIYSSRFGSPVECLASWDSKLHGPNNLNTHNEPPLRGD-- 179
           + S  QK+FLVIDQTG QTT++YSS                         NEP  R D  
Sbjct: 93  ESSSHQKQFLVIDQTGGQTTIVYSS-----------------------MGNEPSFRRDLN 129

Query: 180 ---VNNVVGVGPALDDKVDENQGTDTESEMHEDTEEINALLXXXXXXXXXXXX----XVT 232
                 V    P L  KVDEN  T  ESEMHEDTEEINALL                 VT
Sbjct: 130 LNLNLKVNMTEPTLAHKVDENLKTSIESEMHEDTEEINALLYSDSYGYSTQDEDDDDEVT 189

Query: 233 STGHSPSTMTTHDNPAPLLGAEEEVASSRAGEAKKRKRADGDAYGDHMQFMDTANSLNPN 292
           STGHSPSTMTTHDN     G   E  +S AG+ KKRK+ DG  Y D +Q +DT +S N N
Sbjct: 190 STGHSPSTMTTHDNCEAFRGETAEEVASIAGKTKKRKQLDG--YYDDIQLIDTGSSQNLN 247

Query: 293 RPIDIEDDDAESRCSSDNFSQGEMGSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQL 352
           +      DDAESRCSS+N      GSL+GNKKM+K+KI+DVLS+L+ I+PGGKDKDP  L
Sbjct: 248 KS-SATGDDAESRCSSNN----NEGSLSGNKKMKKDKIRDVLSILRSIIPGGKDKDPAML 302

Query: 353 LDEAIRCLKSLKVKARALGLDAL 375
           LD+AI CLK+LK KA+AL LDAL
Sbjct: 303 LDDAIHCLKNLKHKAQALRLDAL 325


>Glyma08g07430.1 
          Length = 224

 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/179 (36%), Positives = 92/179 (51%), Gaps = 12/179 (6%)

Query: 203 ESEMHEDTEEINALLXXXXXXXXXXXXX----VTSTGHSP-STMTTHDNPAPLLGAEEEV 257
           +SE HEDTEEINA L                 VTST HSP +T  T+         +EEV
Sbjct: 46  KSENHEDTEEINAFLYSDDESSEDDDDDTCDEVTSTDHSPLATNKTYVIQEQFKDTKEEV 105

Query: 258 ASSRAGEAKKRKRADGDAYGDHMQFMDTANSLNPNRPIDIEDDDAESRCSSD-NFSQGEM 316
           ASS     K+ K  DGD Y      +D  + + PN   D   D AES+ SS   +S  + 
Sbjct: 106 ASSDWPN-KRLKLFDGD-YNRSSTPVDRYSLVRPNETCDCVSD-AESKNSSGWAYSVDKT 162

Query: 317 ---GSLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKVKARALGL 372
               S+  + K +K+KI++ L VL++++PG K K+P+ ++D  I  LK L  +  ALG+
Sbjct: 163 KVDNSVAHHIKFKKDKIRESLKVLENLIPGAKGKEPLLVIDGTIEYLKILMSQTGALGV 221


>Glyma07g29970.1 
          Length = 263

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 85/186 (45%), Gaps = 28/186 (15%)

Query: 203 ESEMHEDTEEINALLXXXXXX----XXXXXXXVTSTGHSP-STMTTHDNPAPLLGAEEEV 257
           ESE HEDTEEINALL                 VTST HSP +T  T+         +EEV
Sbjct: 89  ESENHEDTEEINALLYSDDESPEGDDDDSCDEVTSTDHSPLATNKTYVIQEQFEDTKEEV 148

Query: 258 ASSRAGEAKKRKRADGDAYGDHMQFMDTANSLNPNRPIDIEDDDAESRCSSDNFSQGEMG 317
           ASS     K+ K  DGD Y       D  + L PN   D         C SD  S+   G
Sbjct: 149 ASSDWPN-KRLKLFDGD-YNRSSTPADRYSLLRPNETCD---------CVSDAESKNSCG 197

Query: 318 ------------SLTGNKKMRKEKIQDVLSVLQHIVPGGKDKDPIQLLDEAIRCLKSLKV 365
                       S+  + K +K+KI + L VL++++PG K K P+ ++D  I  LK L  
Sbjct: 198 WAYSVDKTKVDNSVACDIKFKKDKISESLKVLENLIPGAKGKGPLLVIDGTIEYLKILMS 257

Query: 366 KARALG 371
           +  ALG
Sbjct: 258 QTGALG 263