Miyakogusa Predicted Gene
- Lj1g3v0052160.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0052160.1 Non Chatacterized Hit- tr|E5GBH0|E5GBH0_CUCME
Putative uncharacterized protein OS=Cucumis melo
subsp,40.53,3e-19,seg,NULL,CUFF.25146.1
(202 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g45310.1 136 2e-32
Glyma10g40220.1 106 2e-23
Glyma20g27190.1 92 3e-19
Glyma10g40220.2 91 9e-19
Glyma17g35230.1 70 2e-12
Glyma11g00430.1 66 2e-11
Glyma14g09930.1 61 7e-10
Glyma06g05010.1 52 3e-07
>Glyma01g45310.1
Length = 174
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/129 (62%), Positives = 89/129 (68%), Gaps = 10/129 (7%)
Query: 68 DLSMVSDASSGPPHFSHHIEPNIAPDHTVSK---LAKRSKKRQKVKQTQHLLQDPSFLDD 124
DLSMVSDASSGPPH + ++ SK L KRSKKRQKVK+ QHL PSFLDD
Sbjct: 53 DLSMVSDASSGPPHLHLPDAQDNGSFYSASKAANLGKRSKKRQKVKENQHL---PSFLDD 109
Query: 125 TASSPLFDNDFSMXXXXXXXXXXSTESVLELDYSQGFSATYFEERSSLHHHFGFLKPSLS 184
TASSP+FD FSM STES+L DYSQGFS TY+EERSSL HFGFL+ S S
Sbjct: 110 TASSPVFD--FSMTNVTVTNQQTSTESML--DYSQGFSTTYYEERSSLQDHFGFLQQSQS 165
Query: 185 ENQVHNNKW 193
EN VH+NKW
Sbjct: 166 ENGVHSNKW 174
>Glyma10g40220.1
Length = 195
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 86/158 (54%), Gaps = 28/158 (17%)
Query: 62 EDDGEKDLSMVSDASSGPPHFSHHIEPNIAPDHTVSKLAKRSKK---------------- 105
+D+ E+DLSMVSDASSGPPHF + E N + SKK
Sbjct: 47 KDEEEEDLSMVSDASSGPPHFPDYDEANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKE 106
Query: 106 -RQKVKQTQHLLQDPSFLDDTASSPLFDNDFSMXXXXXXXXXXSTESVLELDYSQGFSAT 164
+Q ++ QHL PSFL DTASSP+F DFS S S+ LDYSQGFSAT
Sbjct: 107 NQQHLEDQQHL---PSFLYDTASSPVF--DFSTNNVNVANQQTSIGSM--LDYSQGFSAT 159
Query: 165 YFEERSSLH-HHFGFLKPSLSENQVHNNKWYGMKEMGM 201
YFE RSS HFGFL+ S N++ KWYG K MG+
Sbjct: 160 YFEGRSSFQGEHFGFLQ---SGNELQGKKWYGGKGMGI 194
>Glyma20g27190.1
Length = 188
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 77/141 (54%), Gaps = 21/141 (14%)
Query: 66 EKDLSMVSDASSGPPHFSHHIEPNI---------APDHTVSKLAKRSKKRQKVKQT---- 112
E+DLSMVSDASSGPPHF + E + + KLAK K+QKVK+
Sbjct: 55 EEDLSMVSDASSGPPHFPDYDEAYFNEEVNGCFYSASNKAVKLAKSGAKKQKVKENQQHL 114
Query: 113 QHLLQDPSFLDDTASSPLFDNDFSMXXXXXXXXXXSTESVLELDYSQGFSATYFEERSSL 172
Q PSFL DTASSP+ DFS S S+ LDYSQGFSATYFE R S
Sbjct: 115 QDQQHLPSFLHDTASSPVV--DFSTNSVNEANQQTSIGSM--LDYSQGFSATYFEGRPSF 170
Query: 173 H-HHFGFLKPSLSENQVHNNK 192
HFGFL+ S N++ NK
Sbjct: 171 QGEHFGFLQ---SGNELQGNK 188
>Glyma10g40220.2
Length = 185
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 73/136 (53%), Gaps = 25/136 (18%)
Query: 63 DDGEKDLSMVSDASSGPPHFSHHIEPNIAPDHTVSKLAKRSKK----------------- 105
D+ E+DLSMVSDASSGPPHF + E N + SKK
Sbjct: 48 DEEEEDLSMVSDASSGPPHFPDYDEANYFNEEVNGCFYSASKKAVMQAKSGTKKKKIKEN 107
Query: 106 RQKVKQTQHLLQDPSFLDDTASSPLFDNDFSMXXXXXXXXXXSTESVLELDYSQGFSATY 165
+Q ++ QHL PSFL DTASSP+F DFS S S+ LDYSQGFSATY
Sbjct: 108 QQHLEDQQHL---PSFLYDTASSPVF--DFSTNNVNVANQQTSIGSM--LDYSQGFSATY 160
Query: 166 FEERSSLH-HHFGFLK 180
FE RSS HFGFL+
Sbjct: 161 FEGRSSFQGEHFGFLQ 176
>Glyma17g35230.1
Length = 183
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 8/126 (6%)
Query: 62 EDDGEKDLSMVSDASSGPPHFSHHIEP-NIAPDHTVSKLAKRSKKRQKVKQTQHLLQDPS 120
E+ E+DLSMVSDASSGPP++ + N P +S K S+K+ K + Q PS
Sbjct: 47 EEYSEEDLSMVSDASSGPPYYDNECYCQNWYP--CLSSTTKDSQKKNKKVKEYGRSQQPS 104
Query: 121 FLDDTASSPLFDNDFSMXXXXXXXXXXSTESVLE--LDYSQGFSATYFEERSSLHHHFGF 178
LDDTASSP F+ S +E L++SQ SAT + ++ HFGF
Sbjct: 105 PLDDTASSPFFN---CAKESHKKQDSFSGNGAVESALNFSQCVSATRIKRKTKFQKHFGF 161
Query: 179 LKPSLS 184
L SL+
Sbjct: 162 LDRSLA 167
>Glyma11g00430.1
Length = 161
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 74/136 (54%), Gaps = 31/136 (22%)
Query: 56 KATNEEEDDGEKDLSMVSDASSGPPHFSHHIEPNIAPDHTVSKLAK---RSKKRQKVKQT 112
K T + E+ E+DLSMVSDASSGPPH + ++ SK AK +SKKRQKVK+
Sbjct: 33 KQTKKLEEAEEEDLSMVSDASSGPPHLHLPDAQDNGSFYSASKAAKLGKKSKKRQKVKEN 92
Query: 113 QHLLQDPSFLDDTASSPLFDNDFSMXX---------------------XXXXXXXXSTES 151
QHL PS LDDTASSP+F DFSM S ES
Sbjct: 93 QHL---PSLLDDTASSPVF--DFSMVTFTFLALPYLLFLVLKKSPLNNFTVTKQQTSAES 147
Query: 152 VLELDYSQGFSATYFE 167
+ LDYSQGFSATY+E
Sbjct: 148 M--LDYSQGFSATYYE 161
>Glyma14g09930.1
Length = 154
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 62 EDDGEKDLSMVSDASSGPPHFSHHIEP-NIAPDHTVSKLAKRSKKRQKVKQTQHLLQDPS 120
E+ E+DLSMVSDASSGPPH+ + N P +S AK S+K+ K + Q PS
Sbjct: 51 EEYSEEDLSMVSDASSGPPHYDNECYCQNWYP--CLSSKAKESQKKNKKVKEYGRSQQPS 108
Query: 121 FLDDTASSPLFDNDFSMXXXXXXXXXXSTESVLE--LDYSQGFSAT 164
LDDTASSP F+ S S +E LD+SQ SAT
Sbjct: 109 PLDDTASSPFFN---SSKESHKKQDSFSGNGAVESALDFSQCVSAT 151
>Glyma06g05010.1
Length = 153
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 7/82 (8%)
Query: 55 RKATNEEEDDGEKDLSMVSDASSGPPHFSHHIEPNIAPD--HTVSKLAKRSK--KRQKVK 110
+ AT EEE E+DLSM+SDASSGPPH+ + N + + S K S+ K +KVK
Sbjct: 42 KGATLEEE---EEDLSMISDASSGPPHYHEDDDQNYCVNWYPSTSHYTKESENNKNKKVK 98
Query: 111 QTQHLLQDPSFLDDTASSPLFD 132
+ + Q S LDDTASSP+ +
Sbjct: 99 EYGNNQQPSSPLDDTASSPVLN 120