Miyakogusa Predicted Gene
- Lj1g3v0052100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0052100.1 Non Chatacterized Hit- tr|I1LFQ0|I1LFQ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20225
PE,84.89,0,UMUC,DNA-repair protein, UmuC-like, N-terminal;
IMS,DNA-repair protein, UmuC-like; no description,NU,CUFF.25137.1
(250 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g00410.1 415 e-116
Glyma11g00410.2 415 e-116
Glyma01g45340.1 375 e-104
Glyma16g20250.1 86 5e-17
Glyma01g45490.1 80 1e-15
Glyma08g09400.1 65 9e-11
Glyma13g25230.1 51 1e-06
>Glyma11g00410.1
Length = 663
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/225 (85%), Positives = 208/225 (92%)
Query: 26 GGDRPHPWQSYHTVYTIAKAGMEGVDKEKVQRTVYEMSKGSKYFQNEERKEAFINHKIHN 85
G + PWQSYHTVYT AKAGME VDKEKVQR VYEMSKGSKYFQNEERKEAFI KI N
Sbjct: 6 GTEDDRPWQSYHTVYTTAKAGMELVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDN 65
Query: 86 FRLNCAKLTPQDLSHYRKVADRRILELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGK 145
R+ CA LT +DL+HY+KVADRRI+ELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGK
Sbjct: 66 LRIQCANLTQEDLAHYQKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGK 125
Query: 146 PMAVGTISMISTANYEARKFGVRSAMPGFIARKLCPQLIFVPTDFNKYTHYSDLTRKVFR 205
PMAVG++SM+STANYEARKFGVR+AMPGFIARKLCP+LIFVPTDF KYT+YSDLTRKVF
Sbjct: 126 PMAVGSMSMLSTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFG 185
Query: 206 RYDPNFIAGSLDEAYLDITQVCKERNVKSEQIAQELRASVYEETG 250
RYDPNFIAGSLDEAYLDIT+VC+ERNVKSE+IAQELRA VYEETG
Sbjct: 186 RYDPNFIAGSLDEAYLDITEVCRERNVKSEEIAQELRAGVYEETG 230
>Glyma11g00410.2
Length = 538
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 193/225 (85%), Positives = 208/225 (92%)
Query: 26 GGDRPHPWQSYHTVYTIAKAGMEGVDKEKVQRTVYEMSKGSKYFQNEERKEAFINHKIHN 85
G + PWQSYHTVYT AKAGME VDKEKVQR VYEMSKGSKYFQNEERKEAFI KI N
Sbjct: 6 GTEDDRPWQSYHTVYTTAKAGMELVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDN 65
Query: 86 FRLNCAKLTPQDLSHYRKVADRRILELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGK 145
R+ CA LT +DL+HY+KVADRRI+ELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGK
Sbjct: 66 LRIQCANLTQEDLAHYQKVADRRIVELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGK 125
Query: 146 PMAVGTISMISTANYEARKFGVRSAMPGFIARKLCPQLIFVPTDFNKYTHYSDLTRKVFR 205
PMAVG++SM+STANYEARKFGVR+AMPGFIARKLCP+LIFVPTDF KYT+YSDLTRKVF
Sbjct: 126 PMAVGSMSMLSTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYSDLTRKVFG 185
Query: 206 RYDPNFIAGSLDEAYLDITQVCKERNVKSEQIAQELRASVYEETG 250
RYDPNFIAGSLDEAYLDIT+VC+ERNVKSE+IAQELRA VYEETG
Sbjct: 186 RYDPNFIAGSLDEAYLDITEVCRERNVKSEEIAQELRAGVYEETG 230
>Glyma01g45340.1
Length = 621
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 189/204 (92%)
Query: 47 MEGVDKEKVQRTVYEMSKGSKYFQNEERKEAFINHKIHNFRLNCAKLTPQDLSHYRKVAD 106
MEGVDKEKVQR VYEMSKGSKYFQNEERKEAFI KI N R+ CA L+ DL+HY+KVAD
Sbjct: 1 MEGVDKEKVQRVVYEMSKGSKYFQNEERKEAFIKQKIDNMRIQCASLSQADLAHYQKVAD 60
Query: 107 RRILELEASRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGTISMISTANYEARKFG 166
RI+ELE+SRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVG++SMISTANYEARKFG
Sbjct: 61 SRIVELESSRDLSRIWLHVDMDAFYAAVETLSNPTLKGKPMAVGSMSMISTANYEARKFG 120
Query: 167 VRSAMPGFIARKLCPQLIFVPTDFNKYTHYSDLTRKVFRRYDPNFIAGSLDEAYLDITQV 226
R+AMPGFIARKLCP+LIFVPTDFNKY +YSDLTRKVFRRYDPNFIAGSLDEAYLDIT+V
Sbjct: 121 FRAAMPGFIARKLCPELIFVPTDFNKYNYYSDLTRKVFRRYDPNFIAGSLDEAYLDITEV 180
Query: 227 CKERNVKSEQIAQELRASVYEETG 250
C+ERNVKSE+I QELRA V EETG
Sbjct: 181 CRERNVKSEEIVQELRAGVNEETG 204
>Glyma16g20250.1
Length = 69
Score = 85.5 bits (210), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/80 (58%), Positives = 57/80 (71%), Gaps = 12/80 (15%)
Query: 123 LHVDMDAFYAAVETLSNPTLKGKPMAVGTISMISTANYEARKFGVRSAMPGFIARKLCPQ 182
L+VDMDAFY AVE +SN TL GKPMAV ++SM+ST+ GFIAR LCP+
Sbjct: 1 LYVDMDAFYGAVEAISNLTLNGKPMAVRSMSMLSTSMS------------GFIARTLCPE 48
Query: 183 LIFVPTDFNKYTHYSDLTRK 202
L FVPTDF KYT+Y+D+T K
Sbjct: 49 LTFVPTDFKKYTYYNDVTTK 68
>Glyma01g45490.1
Length = 1052
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Query: 114 ASRDLSR--IWLHVDMDAFYAAVETLSNPTLKGKPMAV-------GTISMISTANYEARK 164
++ D+S + +HVDMD F+ +V ++P L G+P+AV GT + IS+ANY AR
Sbjct: 309 SASDISHNSVIIHVDMDCFFVSVVIRNHPELLGQPVAVCHSNNSNGT-AEISSANYPARS 367
Query: 165 FGVRSAMPGFIARKLCPQLIFVPTDFNKYTHYSDLTRKVFRRYDPNFIAGSLDEAYLDIT 224
G+R+ M A+ LCP L+ P +F Y +D + + A S DEA+LD T
Sbjct: 368 HGIRAGMFVRDAKALCPHLVIFPYNFEAYEEVADQFYSILHQRCKKVQAVSCDEAFLDAT 427
Query: 225 QVCKERNVKSEQIAQELRASVYEETG 250
E E +A +R +Y+ TG
Sbjct: 428 DSEVE---DPELLASSIREEIYKTTG 450
>Glyma08g09400.1
Length = 703
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 120 RIWLHVDMDAFYAAVETLSNPTLKGKPMAV--------GTISMISTANYEARKFGVRSAM 171
R+ HVDMD FY VE P L+G P AV G + +S YEAR+ GV+ +M
Sbjct: 12 RVIAHVDMDCFYVQVEQRKQPNLRGLPSAVIQYNSYKGGALIAVS---YEARRCGVKRSM 68
Query: 172 PGFIARKLCP--QLIFVPT-----DFNKYTHYSDLTRKVFRRYDPNFIAGSLDEAYLDIT 224
G A++ CP QL+ VP D N Y + V + A S+DE YLD+T
Sbjct: 69 RGDEAKEACPQIQLVQVPVARGKADLNSYRNAGSEVVSVLSQKGRCERA-SIDEVYLDLT 127
>Glyma13g25230.1
Length = 27
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/26 (80%), Positives = 25/26 (96%)
Query: 177 RKLCPQLIFVPTDFNKYTHYSDLTRK 202
+KLCP+LIFVPTDF KYT+YSDLT+K
Sbjct: 1 QKLCPELIFVPTDFKKYTYYSDLTKK 26