Miyakogusa Predicted Gene

Lj1g3v0052050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0052050.1 Non Chatacterized Hit- tr|Q01DM7|Q01DM7_OSTTA
Putative aminoacyl-t-RNA synthetase (ISS) (Fragment)
O,41.89,4e-19,TRNASYNTHGB,Glycine-tRNA ligase, beta subunit;
tRNA_synt_2f,Glycine-tRNA ligase, beta subunit; SUBFA,CUFF.25130.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g26120.1                                                       265   1e-71

>Glyma03g26120.1 
          Length = 911

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/155 (91%), Positives = 146/155 (94%)

Query: 1   MRSLARQCAQLWLKTREMLGFPLGLISEPDQIVLPKEVLEAACEKVHDHSRAFVLEIGTE 60
           MRSLARQCAQLWLKTREML FPLG ISEPD  VLPKEVLEAACEKVHDHSRAFVLEIGTE
Sbjct: 341 MRSLARQCAQLWLKTREMLDFPLGFISEPDHFVLPKEVLEAACEKVHDHSRAFVLEIGTE 400

Query: 61  ELPPHDVVDASKQLKDLMLQLLEQQRLKHGEVQVFGTPRRLVVAVENLFTKQTEKEVEIR 120
           E+PP DVVDASKQLKDL+LQLLE+QRL HGEVQ FGTPRRLVVAVENL TKQ EKEVE+R
Sbjct: 401 EMPPQDVVDASKQLKDLLLQLLERQRLNHGEVQAFGTPRRLVVAVENLCTKQAEKEVEVR 460

Query: 121 GPPVSKAFDHEGNPTKAIEGFSRRYSVPLDLVYRK 155
           GPPVSKAFDHEGNPTKAIEGFSRRYSVPLDLVYRK
Sbjct: 461 GPPVSKAFDHEGNPTKAIEGFSRRYSVPLDLVYRK 495