Miyakogusa Predicted Gene

Lj1g3v0047810.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0047810.1 Non Chatacterized Hit- tr|I1JB03|I1JB03_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.06,0,Pseudouridine
synthase,Pseudouridine synthase, catalytic domain;
PseudoU_synth_2,Pseudouridine
synth,NODE_53752_length_1380_cov_34.390579.path2.1
         (429 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g45530.1                                                       590   e-169
Glyma17g35030.1                                                       264   1e-70
Glyma14g10470.1                                                       132   1e-30
Glyma04g02320.1                                                        64   4e-10
Glyma20g31860.1                                                        59   8e-09

>Glyma01g45530.1 
          Length = 420

 Score =  590 bits (1522), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 305/424 (71%), Positives = 342/424 (80%), Gaps = 13/424 (3%)

Query: 12  VLRSWRS--RHFSATSEQDAKAKWHTLPPVTATVKG--QGNQVSSSTSTTALKWVLRCCP 67
           +LR+ RS  R FS    +  + KW TLPPV+A+     + NQ+SS T TTALKWV+RCCP
Sbjct: 1   MLRALRSGQRQFSVAVTRPWEDKWLTLPPVSASSSASVELNQLSS-TPTTALKWVVRCCP 59

Query: 68  NLPRTLVHKLFRLRQVRV----AIQDNRLKRVTAKDTLNSGDCIVLPHSVKEIPIPKQQQ 123
           +LPR LVHKLFRLRQVR+     IQ    KRV AKDTLN+GD I+LP SVK     KQ  
Sbjct: 60  HLPRALVHKLFRLRQVRIHPATVIQQQTFKRVAAKDTLNTGDRILLPQSVKV----KQTP 115

Query: 124 LECHTTAKEISFIRSLVIYKDPAILVLNKPPGMPVQGGIDIKRSLDVVAASCLKYEYSEP 183
              H T ++I+FIR+LVIYKDPAILVLNKPPGMPVQGGI+IKRSLD VAA+ L Y YS+P
Sbjct: 116 THSHLTPQQINFIRTLVIYKDPAILVLNKPPGMPVQGGINIKRSLDAVAAASLNYGYSQP 175

Query: 184 PRLVHRLDRDCSGILVMGRTQTSATVLHSIFREKTSSASDDLGTENRVLQRKYRALVIGC 243
           PRLVHRLDRDCSGILVMGRT TS TVLHSIFREKTS ASDD+G E R+LQR+Y ALV+GC
Sbjct: 176 PRLVHRLDRDCSGILVMGRTHTSTTVLHSIFREKTSRASDDIGKEKRILQRRYWALVLGC 235

Query: 244 PRRPRGLVTASLGKVVVDNGKSDRITIVDNSSLLSSQHAITEYRVIGSSSHGYTWLELSP 303
           PRRP+GLVTASLGKVVVDNG+SDRITIVDNS+L+SSQHAITEYRVI SSS GYTWLEL+P
Sbjct: 236 PRRPKGLVTASLGKVVVDNGRSDRITIVDNSTLMSSQHAITEYRVIASSSQGYTWLELTP 295

Query: 304 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWSHFDXXXXXXXXXXXXXXXTLPFGLN 363
           LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKW HFD                LPFGLN
Sbjct: 296 LTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWGHFDLPNVEDSREELLNEEKLPFGLN 355

Query: 364 LNKGSINEKQPRLHLHCKQIVLPDISQALKHVQSDSSYDLSQVKALELVAAMPPYMRRSW 423
           LNKGSI+E  PRLHLHCKQ+VLP+ISQAL++VQS SS DLS V+ LELVA +PPYM+RSW
Sbjct: 356 LNKGSISENHPRLHLHCKQMVLPNISQALQNVQSASSCDLSLVEELELVADLPPYMQRSW 415

Query: 424 DVMN 427
           DV N
Sbjct: 416 DVTN 419


>Glyma17g35030.1 
          Length = 361

 Score =  264 bits (675), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/348 (41%), Positives = 210/348 (60%), Gaps = 17/348 (4%)

Query: 92  LKRVTAKDTLNSGDCIVLPHSVKEIPIPKQQQL----ECHTTAKEISFIRSLVIYKDPAI 147
           ++++   + +  G  + +P S+ E  I K+         +  A EI +++ L    D AI
Sbjct: 17  MRKIRPNEVMKRGARVHVPVSICETRISKRYDAIPSGTLYPNADEIKYLQRL----DSAI 72

Query: 148 LVLNKPPGMPVQGGIDIKRSLDVVAASCLKYEYSEPPRLVHRLDRDCSGILVMGRTQTSA 207
           +VLNKPP +PV+G + +  S+D +AA+ L Y+Y E P+LVHRLDR+ SGIL++GRT+ S 
Sbjct: 73  IVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGRTKDSV 132

Query: 208 TVLHSIFRE--KTSSASDDLGTENRVLQRKYRALVIGCPRRPRGLVTASLGKVVVDNGKS 265
           + L  +F       S+  D         ++Y ALVIG P+   G++ A L KV++++GK+
Sbjct: 133 SHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSKVLLNDGKT 192

Query: 266 DRITIVDNSSLLSSQHAITEYRVIGSSSHGYTWLELSPLTGRKHQLRVHCAEVLGTPIVG 325
           +RI +  +SS+   Q A+TEYRV+G   +G +W+EL PLT RKHQLRVHCAE LGTPIVG
Sbjct: 193 ERIILAHHSSVEPRQEAVTEYRVLGPQINGCSWVELRPLTYRKHQLRVHCAEALGTPIVG 252

Query: 326 DYKYGWQAHRKWSHFDXXXXXXXXXXXXXXXTLPFGLNLNKGSINEKQPRLHLHCKQIVL 385
           DYKYGW  H +W                     P GL++ KGS+  K P LHLHC+++VL
Sbjct: 253 DYKYGWFVHSRWKQMPRVDIEPTTGKPYKLRR-PEGLDVQKGSVLSKVPLLHLHCRELVL 311

Query: 386 PDISQALKHVQSDSSYDL-----SQVKALELVAAMPPYMRRSWDVMNS 428
           P+I + + HV ++SS +L      Q   L  VA MP +MR SW++M+S
Sbjct: 312 PNIVKFM-HVLNNSSEELRTSLREQPDVLRFVATMPSHMRISWNLMSS 358


>Glyma14g10470.1 
          Length = 218

 Score =  132 bits (331), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 109/196 (55%), Gaps = 40/196 (20%)

Query: 238 ALVIGCPRRPRGLVTASLGKVVVDNGKSDRITIVDNSSLLSSQHAITEYRVIGSSSHGYT 297
           ALVIG P+   G++ A L KV++++GK++     D++S  S   +++ YR          
Sbjct: 55  ALVIGTPKEKEGIIHAPLSKVLLNDGKTE-----DDTS--SPFESVSTYR---------- 97

Query: 298 WLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYGWQAHRKWSHFDXXXXXXXXXXXXXXXT 357
                     KHQLRVHCAE LGTPIVGDYKYGW  H +W                    
Sbjct: 98  ----------KHQLRVHCAEALGTPIVGDYKYGWFVHSRWKQMPRVDIEPTTGK------ 141

Query: 358 LPFGLNLNKGSINEKQPRLHLHCKQIVLPDISQALKHVQSDSSYDL-----SQVKALELV 412
            P GL++ KGS+  K P LHLHC+++VLP+I++ L HV ++SS +L      Q   L  V
Sbjct: 142 -PEGLDVQKGSVLSKVPLLHLHCRELVLPNIAKFL-HVLNNSSEELRTSLREQPDVLRFV 199

Query: 413 AAMPPYMRRSWDVMNS 428
           A MP +MR SW++M+S
Sbjct: 200 ATMPSHMRISWNLMSS 215


>Glyma04g02320.1 
          Length = 450

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 123/294 (41%), Gaps = 72/294 (24%)

Query: 90  NRLKRVTAKDTLNSGDCIVLPHSVKEIPIPKQQQLECHTTAKEISFIRSL-------VIY 142
           N + R   + ++ SG   V    V ++    +   E   T  E+  +R++       ++Y
Sbjct: 93  NGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNIPLDIVY 152

Query: 143 KDPAILVLNKPPGMPVQ-----------GGI------------------DIKRSLD---- 169
           +D  +LV+NKP  M V             GI                  D + S D    
Sbjct: 153 EDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDTEDSDDEFNS 212

Query: 170 --VVAASCLKYE-------YSEPPRLVHRLDRDCSGILVMGRTQTSATVLHSIFREKTSS 220
              +A+SC            S  P +VHRLD+  SG+LV+ + + S   L   F+++T  
Sbjct: 213 YISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKQRT-- 270

Query: 221 ASDDLGTENRVLQRKYRALVIGCPRRPRGLVTASLGKVVVDNGKSDRITIVD---NSSLL 277
                      ++R Y +L  G P    G V   +G+   D     R+T V    NS   
Sbjct: 271 -----------IKRLYVSLTAGVPTPVAGRVEVPVGR---DTNNRIRMTAVTGPVNSK-- 314

Query: 278 SSQHAITEYRVIGSSSHGY-TWLELSPLTGRKHQLRVHCAEVLGTPIVGDYKYG 330
            +++A + Y+VI   + G  + +E    TGR HQ+R H A+ LG P++GD  YG
Sbjct: 315 KARYAASRYKVIEILAGGSCSLVEWKLETGRTHQIRAH-AKYLGVPLLGDELYG 367


>Glyma20g31860.1 
          Length = 371

 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 101/205 (49%), Gaps = 24/205 (11%)

Query: 140 VIYKDPAILVLNKPPGMPV-QGGIDIKRSLDVVAASCLKYEYSEP----------PRLVH 188
           V+Y+D  ++ LNKP G+ V  GG+  +R++     + L++E +            P  VH
Sbjct: 97  VLYEDDDMIALNKPSGLQVLPGGLYQQRTI----LTQLQWEANNQGTCEMHKRLHPVPVH 152

Query: 189 RLDRDCSGILVMGRTQTSATVLHSIFREKTSSASDDLGTENRV--LQRKYRALVIGCPRR 246
           RL R  SGIL+  +T+ +   L S F + TS       T+  +  + + YRALV G    
Sbjct: 153 RLGRGTSGILLCAKTKLARARLASHFADGTSHVGGKRDTKQELGKIAKMYRALVSGIVEN 212

Query: 247 PRGLVTASLGKVVVDNGKSDRITIVDNSSLLSSQHAITEYRVIGSS-SHGYTWLELSPLT 305
            +  +   +G +V   G +  + +       S + A++   ++ ++     T +++   +
Sbjct: 213 DKVTINQPIG-IVKYPGVAKGLYVASE----SGKPALSVVDILETNIQENSTLVQVKIQS 267

Query: 306 GRKHQLRVHCAEVLGTPIVGDYKYG 330
           GR HQ+R+H +  +G P++GD  YG
Sbjct: 268 GRPHQIRIHLS-FIGHPLLGDPLYG 291