Miyakogusa Predicted Gene

Lj1g3v0016520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0016520.1 tr|B9HEY9|B9HEY9_POPTR Predicted protein
(Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_217237
PE=3,36.36,7e-16, ,CUFF.25279.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g38770.1                                                       186   2e-47
Glyma06g16130.1                                                       175   2e-44
Glyma13g09620.1                                                        54   1e-07
Glyma04g42390.1                                                        48   5e-06

>Glyma04g38770.1 
          Length = 703

 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/164 (61%), Positives = 123/164 (75%), Gaps = 13/164 (7%)

Query: 31  RVKNCETCALQEASESEFEQGV-----PENPLAMVPYQKLDGDDDACSYSITVGDSKQSK 85
           R  +C +C LQE S +EFEQG+      ENPLA+VP++KLD   DA  +S+ V +SK  K
Sbjct: 185 REISCGSCELQECSGNEFEQGLCGDVEKENPLALVPFKKLD---DAPCFSVLVDNSKH-K 240

Query: 86  PGWSFLRQVFHPRKHSPKSSMKNSFVLQRAL--PSYHSSAVVHPDDKEVTIEQNDGSTLD 143
           PGWS LR VFH +KH+ KSSMKN+FV QRAL  P+ HSSAVVHPD K+++IEQ D S LD
Sbjct: 241 PGWSLLRHVFHHKKHTHKSSMKNTFVFQRALRQPNCHSSAVVHPDHKQISIEQIDDSPLD 300

Query: 144 GVSGAIVPFGS--TSILPAPSFCSDLNSLPDELMGLQEKYSSSC 185
           GVSGAIVPF S  T+I   PS CSDL+SLP+EL+ LQEKY+SSC
Sbjct: 301 GVSGAIVPFESTTTTIFTLPSICSDLSSLPEELLVLQEKYTSSC 344


>Glyma06g16130.1 
          Length = 700

 Score =  175 bits (444), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/170 (57%), Positives = 125/170 (73%), Gaps = 15/170 (8%)

Query: 26  YTKRRRVKNCETCALQEASESEFEQGV-----PENPLAMVPYQKLDGDDDACSYSITVGD 80
           YT +  +K+C +CALQE S +EFEQG+      ENPLA+VP++KL+   DA  +S+ V +
Sbjct: 177 YTNKN-MKSCGSCALQEGSGTEFEQGLCEDVEKENPLALVPFKKLE---DAPCFSVVVDN 232

Query: 81  SKQSKPGWSFLRQVFHPRKHSPKSS-MKNSFVLQRAL--PSYHSSAVVHPDDKEVTIEQN 137
           SK  KPGWS LR VFH +KH+ KSS MKN+FV QRAL  P+ HSSAVVHPD K+++ +Q 
Sbjct: 233 SK-PKPGWSLLRHVFHHKKHNHKSSSMKNTFVFQRALRQPNCHSSAVVHPDHKQISFKQI 291

Query: 138 DGSTLDGVSGAIVPF--GSTSILPAPSFCSDLNSLPDELMGLQEKYSSSC 185
           D S LDGVSGAIVPF   +T++   PS CS L+SLP+EL+ LQEKYSS C
Sbjct: 292 DDSPLDGVSGAIVPFESATTTLFTLPSICSGLSSLPEELLVLQEKYSSLC 341


>Glyma13g09620.1 
          Length = 691

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 66/156 (42%), Gaps = 39/156 (25%)

Query: 33  KNCETCALQEASESEFEQGVPENPLAMVPYQKLDGDDDACSYSITVGDSKQSKPGWSFLR 92
           K C  CA +E  ES  +     NPLA+VP Q  D                 SKPGW  LR
Sbjct: 211 KRCSICASEE--ESCGDASDENNPLAIVPVQTNDA---------------ASKPGWPLLR 253

Query: 93  Q-VFHPRKHSPKSSMKNSFVLQRA--LPSYHSSAVVHPDDKEVTIEQNDGSTLDGVSGAI 149
           + +   +K S KS ++   V+Q A  LPS   S   H D K   ++   G+         
Sbjct: 254 KTIASDKKCSEKSLLRQISVVQWAMQLPSRDLSYAAHQDHKANNLDAEIGT--------- 304

Query: 150 VPFGSTSILPAPSFCSDLNSLPDELMGLQEKYSSSC 185
                     A S   +  S+P EL GL EKYSS+C
Sbjct: 305 ----------ASSPERNSRSIPKELEGLHEKYSSTC 330


>Glyma04g42390.1 
          Length = 684

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 77/163 (47%), Gaps = 30/163 (18%)

Query: 37  TCALQEASESEFEQGVP-----ENPLAMVPYQKLDGDDDACSYSITVGDSKQSKPGWSFL 91
           T AL ++S  +   GV      EN LA+VP Q             +V    + KPGW  L
Sbjct: 177 TLALPDSSCYQSADGVSGDDGRENSLAIVPVQP------------SVAAITEMKPGWPLL 224

Query: 92  -RQVFHPRKHSPKSSMKNSF-VLQRA--LPSYHSSAVVHPDDKEVTIEQ--NDGSTLDGV 145
            R +   R+ + +  M     V+Q A  LPS + S  V  ++K    +Q  +  + LD  
Sbjct: 225 HRGILLDRQSADRLLMHPQISVVQWAMRLPSRNLSYAVDCNEKPNICDQGQDQHAALDSE 284

Query: 146 SGAIVPFGS---TSILPAPSFCSDLNSLPDELMGLQEKYSSSC 185
           SGA+VP  +   T+ LP      +  ++P EL GL EKYSS+C
Sbjct: 285 SGALVPVDAELGTASLPE----HNSGNIPKELEGLHEKYSSTC 323