Miyakogusa Predicted Gene

Lj1g3v0013230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0013230.1 tr|O22512|O22512_SOYBN Grr1 OS=Glycine max
GN=grr1 PE=2 SV=1,46.05,0.00000000004,
,NODE_34412_length_216_cov_656.555542.path3.1
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g14410.1                                                        57   4e-09
Glyma17g31940.1                                                        54   4e-08
Glyma04g07110.1                                                        53   9e-08
Glyma06g07200.1                                                        50   4e-07

>Glyma14g14410.1 
          Length = 644

 Score = 57.4 bits (137), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/28 (78%), Positives = 25/28 (89%)

Query: 41 QWLEQKQETSIETLPDECLFEIFRKLPG 68
          +W EQKQ+TSIE LPDECLFEIFR+LP 
Sbjct: 57 EWFEQKQKTSIEALPDECLFEIFRRLPA 84


>Glyma17g31940.1 
          Length = 610

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/27 (74%), Positives = 24/27 (88%)

Query: 41 QWLEQKQETSIETLPDECLFEIFRKLP 67
          +W EQK +TS+E LPDECLFEIFR+LP
Sbjct: 57 EWFEQKPKTSVEALPDECLFEIFRRLP 83


>Glyma04g07110.1 
          Length = 636

 Score = 52.8 bits (125), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/28 (71%), Positives = 24/28 (85%)

Query: 41 QWLEQKQETSIETLPDECLFEIFRKLPG 68
          +W EQK +TSIE+LPDECLFEI R+LP 
Sbjct: 57 EWFEQKPKTSIESLPDECLFEILRRLPA 84


>Glyma06g07200.1 
          Length = 638

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/30 (70%), Positives = 25/30 (83%), Gaps = 2/30 (6%)

Query: 41 QWLEQKQE--TSIETLPDECLFEIFRKLPG 68
          +W EQKQ+  TSIE+LPDECLFEI R+LP 
Sbjct: 57 EWFEQKQKPKTSIESLPDECLFEILRRLPA 86