Miyakogusa Predicted Gene
- Lj0g3v0363599.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0363599.3 Non Chatacterized Hit- tr|I1LXD4|I1LXD4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4378
PE=,72.73,0,seg,NULL; CCCH zinc finger,NULL; zinc finger,Zinc finger,
CCCH-type; ZF_C3H1,Zinc finger, CCCH-type;,CUFF.25062.3
(412 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g09610.1 540 e-153
Glyma13g09610.2 292 4e-79
Glyma13g09610.3 265 1e-70
Glyma14g24710.1 148 1e-35
Glyma10g24250.1 78 2e-14
Glyma07g29690.1 64 3e-10
Glyma18g21310.1 63 6e-10
>Glyma13g09610.1
Length = 1813
Score = 540 bits (1391), Expect = e-153, Method: Compositional matrix adjust.
Identities = 261/340 (76%), Positives = 277/340 (81%), Gaps = 5/340 (1%)
Query: 78 ERIFRIGSVRYRMDPSRRTLQRXXXXXXXXXXXXXXXXXXXXXYVPRRLVIGNDEYVRIG 137
ERIFRIGSVRYRMDPSRRTLQR Y+PRRLVIGNDEYV+IG
Sbjct: 1467 ERIFRIGSVRYRMDPSRRTLQRISDDESLSSASTCSGLASKRAYIPRRLVIGNDEYVQIG 1526
Query: 138 NGNQLIRDPKKRTRKLANEKVRWSLHTARQRFARKQKYCQFFTRFGKCNKDGGKCPYIHD 197
NGNQLIRDPK+RTRKLANEKVRWSLHTARQR ARKQKYCQFFTRFGKCNKDGGKCPYIHD
Sbjct: 1527 NGNQLIRDPKRRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHD 1586
Query: 198 PSKVAVCTKFLNGLCSTPNCKLTHKVIQERMPDCSYFFQGLCTNRNCPYRHVNVNPKASI 257
PSK+AVCTKFLNGLCSTPNCKLTHKVI ERMPDCSYF QGLC+NRNCPYRHVNVNPKASI
Sbjct: 1587 PSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCSNRNCPYRHVNVNPKASI 1646
Query: 258 CEGFLKGYCADGNECLKKHSYVCPTFEATGTCVQGTKCKLHHPXXXXXXXXXXXXEDQ-N 316
CEGFLKGYCADGNEC KKHSYVCPTFEATGTC QGT CKLHHP DQ N
Sbjct: 1647 CEGFLKGYCADGNECRKKHSYVCPTFEATGTCTQGTGCKLHHPKKQSKGKKRKRTADQNN 1706
Query: 317 SRGRYFGSIPVDVSEPGMMVAASSH-QDLDLEKELSDYISLD-VNEEVADMVDQSFEHSE 374
SRGRYFG IP DVS+ GMMVA H Q+ +LE+ELSDYISLD VNEEVAD+VDQSFE +
Sbjct: 1707 SRGRYFGFIPADVSKSGMMVAPKRHRQNGELEEELSDYISLDVVNEEVADVVDQSFEPAA 1766
Query: 375 FCDNDSMDLQLDTTDEL-KPVLII-TKLASQASQSIGLQS 412
FCDNDS+DLQLD D L KPVL++ TK Q+ QS LQ+
Sbjct: 1767 FCDNDSLDLQLDDFDGLIKPVLLLKTKFTLQSPQSSSLQA 1806
>Glyma13g09610.2
Length = 1638
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 132/160 (82%), Positives = 136/160 (85%)
Query: 78 ERIFRIGSVRYRMDPSRRTLQRXXXXXXXXXXXXXXXXXXXXXYVPRRLVIGNDEYVRIG 137
ERIFRIGSVRYRMDPSRRTLQR Y+PRRLVIGNDEYV+IG
Sbjct: 1467 ERIFRIGSVRYRMDPSRRTLQRISDDESLSSASTCSGLASKRAYIPRRLVIGNDEYVQIG 1526
Query: 138 NGNQLIRDPKKRTRKLANEKVRWSLHTARQRFARKQKYCQFFTRFGKCNKDGGKCPYIHD 197
NGNQLIRDPK+RTRKLANEKVRWSLHTARQR ARKQKYCQFFTRFGKCNKDGGKCPYIHD
Sbjct: 1527 NGNQLIRDPKRRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHD 1586
Query: 198 PSKVAVCTKFLNGLCSTPNCKLTHKVIQERMPDCSYFFQG 237
PSK+AVCTKFLNGLCSTPNCKLTHKVI ERMPDCSYF QG
Sbjct: 1587 PSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQG 1626
>Glyma13g09610.3
Length = 1620
Score = 265 bits (676), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 120/147 (81%), Positives = 124/147 (84%)
Query: 78 ERIFRIGSVRYRMDPSRRTLQRXXXXXXXXXXXXXXXXXXXXXYVPRRLVIGNDEYVRIG 137
ERIFRIGSVRYRMDPSRRTLQR Y+PRRLVIGNDEYV+IG
Sbjct: 1467 ERIFRIGSVRYRMDPSRRTLQRISDDESLSSASTCSGLASKRAYIPRRLVIGNDEYVQIG 1526
Query: 138 NGNQLIRDPKKRTRKLANEKVRWSLHTARQRFARKQKYCQFFTRFGKCNKDGGKCPYIHD 197
NGNQLIRDPK+RTRKLANEKVRWSLHTARQR ARKQKYCQFFTRFGKCNKDGGKCPYIHD
Sbjct: 1527 NGNQLIRDPKRRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHD 1586
Query: 198 PSKVAVCTKFLNGLCSTPNCKLTHKVI 224
PSK+AVCTKFLNGLCSTPNCKLTHKV
Sbjct: 1587 PSKIAVCTKFLNGLCSTPNCKLTHKVF 1613
>Glyma14g24710.1
Length = 1747
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 105/196 (53%), Gaps = 53/196 (27%)
Query: 222 KVIQERMPDCSYFFQGLCTNRNCPYRHVNVNPKASICEGFLKGYCADGNECLKKHSYVCP 281
+VI ERMPDCSYF Q
Sbjct: 1593 QVIPERMPDCSYFLQ--------------------------------------------- 1607
Query: 282 TFEATGTCVQGTKCKLHHPXXXXXXXXXXXXEDQN-SRGRYFGSIPVDVSEPGMMVAASS 340
TGTC QGTKCKLHHP QN SRGRYFGSIP +VSE GMM+A
Sbjct: 1608 ---ETGTCTQGTKCKLHHPKKQSKGKKRKRTAYQNNSRGRYFGSIPANVSESGMMLAPKR 1664
Query: 341 H-QDLDLEKELSDYISLD-VNEEVADMVDQSFEHSEFCDNDSMDLQLDTTDEL-KPVLII 397
H Q +LE+ELSDYISLD VNEEV D VDQSFE + FCDNDS+DLQLD DEL KPVL++
Sbjct: 1665 HRQSGELEEELSDYISLDDVNEEVLDTVDQSFEPATFCDNDSLDLQLDDFDELIKPVLLL 1724
Query: 398 -TKLASQASQSIGLQS 412
TK Q+ Q LQ+
Sbjct: 1725 KTKFTMQSPQFSSLQA 1740
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 34/55 (61%)
Query: 78 ERIFRIGSVRYRMDPSRRTLQRXXXXXXXXXXXXXXXXXXXXXYVPRRLVIGNDE 132
ERIFRIGSVRYRMDPSRRTLQR Y+PRRLVIGND+
Sbjct: 1530 ERIFRIGSVRYRMDPSRRTLQRISDDESLSSASTCSGLASKRAYIPRRLVIGNDD 1584
>Glyma10g24250.1
Length = 37
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/34 (97%), Positives = 34/34 (100%)
Query: 238 LCTNRNCPYRHVNVNPKASICEGFLKGYCADGNE 271
LC+NRNCPYRHVNVNPKASICEGFLKGYCADGNE
Sbjct: 4 LCSNRNCPYRHVNVNPKASICEGFLKGYCADGNE 37
>Glyma07g29690.1
Length = 111
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 243 NCPYRHVNVNPKASICEGFLKGYCADGNECL 273
NCPYRHVNVNPK SICEGFLKGY ADGN+ L
Sbjct: 77 NCPYRHVNVNPKPSICEGFLKGYYADGNDVL 107
>Glyma18g21310.1
Length = 147
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 29/34 (85%)
Query: 243 NCPYRHVNVNPKASICEGFLKGYCADGNECLKKH 276
NCPYR+VNVNP+ASICE FLKGYC DGN+ L H
Sbjct: 69 NCPYRYVNVNPEASICEVFLKGYCGDGNDVLTNH 102