Miyakogusa Predicted Gene

Lj0g3v0361469.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0361469.2 Non Chatacterized Hit- tr|I1N1E4|I1N1E4_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.85,8e-17,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; AAA_17,NULL; SHIKIMT,CUFF.24900.2
         (53 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g18210.1                                                        92   1e-19
Glyma08g40000.1                                                        74   3e-14

>Glyma18g18210.1 
          Length = 193

 Score = 92.4 bits (228), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/53 (77%), Positives = 50/53 (94%)

Query: 1  MASSNGAVIVIMGVSGAGKTTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGI 53
          M S++G VIV+MGVSGAGK+TIGR+LEKE+ YK+LDADDFHS+SNKEKMR+GI
Sbjct: 1  MPSNDGVVIVVMGVSGAGKSTIGRKLEKESKYKYLDADDFHSESNKEKMRMGI 53


>Glyma08g40000.1 
          Length = 182

 Score = 73.9 bits (180), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/42 (80%), Positives = 38/42 (90%)

Query: 12 MGVSGAGKTTIGRRLEKETGYKFLDADDFHSQSNKEKMRIGI 53
          MGVSGAGKTTIG+ LEKE  YK+LDADDFH +SNKEKMR+GI
Sbjct: 1  MGVSGAGKTTIGQMLEKELKYKYLDADDFHLESNKEKMRMGI 42