Miyakogusa Predicted Gene

Lj0g3v0361339.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0361339.2 Non Chatacterized Hit- tr|A5AP91|A5AP91_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,55.1,0.00000000006,domain in helicases and associated with
SANT,HAS subgroup; seg,NULL; SNF2 FAMILY
CHROMODOMAIN-HELICA,CUFF.24920.2
         (282 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g17220.2                                                       358   3e-99
Glyma09g17220.1                                                       358   3e-99
Glyma02g29380.1                                                       295   5e-80
Glyma05g23990.1                                                        99   4e-21
Glyma08g46710.1                                                        56   4e-08
Glyma18g36660.1                                                        52   5e-07
Glyma03g18720.1                                                        51   1e-06
Glyma16g14060.1                                                        49   4e-06

>Glyma09g17220.2 
          Length = 2009

 Score =  358 bits (920), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 198/295 (67%), Positives = 213/295 (72%), Gaps = 43/295 (14%)

Query: 1   MASKGPRFKFDHETKAKRQKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHA 60
           MASKGPR + DHE++AKRQK LEAP+EPRRPKTHWDHVLEEMVWLSKDFESERKWKLA A
Sbjct: 1   MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 61  KKVALKCSKGFLDQATRGEKKMK----RLRKVALNISKDVKKFWTKIEKLVLYKHQMVLD 116
           KKVAL+ SKG LDQATRGEKKMK    RLRKVALNISKDVKKFWTKIEKLVLYKHQM LD
Sbjct: 61  KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 117 EKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEKNSAEHH-----------ID 165
           EKKKKALDKQLEFLLGQTERYSTMLAENL D     K AE NSAEH            ++
Sbjct: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLGDPY---KSAENNSAEHRKSIHCKDLMLVVE 177

Query: 166 YQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQEELTALHDEMNLPIEELLKR 225
           YQSDA D+DEEY VQS               ALITKEERQEEL AL DEM+LPI+ELLKR
Sbjct: 178 YQSDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDEMDLPIQELLKR 237

Query: 226 YAGEKGELERPQISQEHSEDGAKIARTGDADENGDLSPVSKIGTNDSSVVPGRRC 280
           YAGEK                         +   DL  VSK+ T++SS+V GRRC
Sbjct: 238 YAGEK-------------------------ENRDDLLSVSKVDTSNSSMVSGRRC 267


>Glyma09g17220.1 
          Length = 2009

 Score =  358 bits (920), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 198/295 (67%), Positives = 213/295 (72%), Gaps = 43/295 (14%)

Query: 1   MASKGPRFKFDHETKAKRQKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHA 60
           MASKGPR + DHE++AKRQK LEAP+EPRRPKTHWDHVLEEMVWLSKDFESERKWKLA A
Sbjct: 1   MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 61  KKVALKCSKGFLDQATRGEKKMK----RLRKVALNISKDVKKFWTKIEKLVLYKHQMVLD 116
           KKVAL+ SKG LDQATRGEKKMK    RLRKVALNISKDVKKFWTKIEKLVLYKHQM LD
Sbjct: 61  KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 117 EKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEKNSAEHH-----------ID 165
           EKKKKALDKQLEFLLGQTERYSTMLAENL D     K AE NSAEH            ++
Sbjct: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLGDPY---KSAENNSAEHRKSIHCKDLMLVVE 177

Query: 166 YQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQEELTALHDEMNLPIEELLKR 225
           YQSDA D+DEEY VQS               ALITKEERQEEL AL DEM+LPI+ELLKR
Sbjct: 178 YQSDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDEMDLPIQELLKR 237

Query: 226 YAGEKGELERPQISQEHSEDGAKIARTGDADENGDLSPVSKIGTNDSSVVPGRRC 280
           YAGEK                         +   DL  VSK+ T++SS+V GRRC
Sbjct: 238 YAGEK-------------------------ENRDDLLSVSKVDTSNSSMVSGRRC 267


>Glyma02g29380.1 
          Length = 1967

 Score =  295 bits (754), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 170/255 (66%), Positives = 179/255 (70%), Gaps = 45/255 (17%)

Query: 42  MVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMK----RLRKVALNISKDVK 97
           MVWLSKDFESERKWKLA AKKVAL+ SKG LDQATRGEKKMK    RLRKVALNISKDVK
Sbjct: 1   MVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVK 60

Query: 98  KFWTKIEKLVLYKHQMVLDEKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEK 157
           KFWTKIEKLVLYKHQM LDEKKKKALDKQLEFLLGQTERYSTMLAENLVD     K AE 
Sbjct: 61  KFWTKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDPY---KSAEN 117

Query: 158 NSAEHH-----------IDYQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQE 206
           NSAEHH           ++YQSDA D+DEEY VQ                ALITKEERQE
Sbjct: 118 NSAEHHMSIQCKDLMLVVEYQSDAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQE 177

Query: 207 ELTALHDEMNLPIEELLKRYAGEKGELERPQISQEHSEDGAKIARTGDADENG-DLSPVS 265
           EL AL DEM+LPIEELLKRYAG+K                          ENG DL  VS
Sbjct: 178 ELAALRDEMDLPIEELLKRYAGDK--------------------------ENGDDLLSVS 211

Query: 266 KIGTNDSSVVPGRRC 280
           KIGT++SS+V GRRC
Sbjct: 212 KIGTSNSSIVSGRRC 226


>Glyma05g23990.1 
          Length = 88

 Score = 99.4 bits (246), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/83 (75%), Positives = 67/83 (80%), Gaps = 6/83 (7%)

Query: 85  LRKVALNISKDVKKFWTKIEKL---VLYKHQMVLDEKKKKALDKQLEFLLGQTERYSTML 141
           LRKVALNI KDVKKFWTKIEKL    LYKHQM LD+KKKK LDKQLEFLLGQTERY+TML
Sbjct: 8   LRKVALNIFKDVKKFWTKIEKLYSFFLYKHQMELDKKKKKVLDKQLEFLLGQTERYTTML 67

Query: 142 AENLVDSTSADKPAEKNSAEHHI 164
           AEN VD     K AE NS EH++
Sbjct: 68  AENFVDPY---KSAENNSVEHYM 87


>Glyma08g46710.1 
          Length = 1896

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 7/99 (7%)

Query: 13  ETKAKRQKTLEAPKEPRR--PKTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKG 70
           E K KR   L     P +   K+HW  VLEEM WL+ DF  ER WK+  A +++ + S  
Sbjct: 485 EVKRKRIAELSVRTLPSQIHRKSHWGFVLEEMTWLANDFAQERLWKITAAAQLSHQAS-- 542

Query: 71  FLDQATRGEKKMKRL--RKVALNISKDVKKFWTKIEKLV 107
                 R EK+ + L  + ++ N++K V +FW  IE L+
Sbjct: 543 -FTSRLRFEKQSEHLGVKILSHNMAKAVMQFWNSIELLL 580


>Glyma18g36660.1 
          Length = 2122

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 5/78 (6%)

Query: 32  KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKRL--RKVA 89
           K+ W  VLEEM WL+ DF  ER WK+  A +++ + +        R EK+ K L  + ++
Sbjct: 587 KSRWGFVLEEMTWLANDFAQERLWKITAAAQLSHQAT---FTSRLRFEKQSKHLGVKILS 643

Query: 90  LNISKDVKKFWTKIEKLV 107
            N++K V +FW  IE L+
Sbjct: 644 HNLAKAVMQFWNSIELLL 661


>Glyma03g18720.1 
          Length = 605

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 5/78 (6%)

Query: 32  KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKRLRKVALN 91
           K+ W  +LEEM WL+ DF  ER WK+A A ++  +    F  Q +R EK  K+L    L+
Sbjct: 480 KSQWGFLLEEMAWLANDFAQERLWKIAAAAQLGHQ--TAFTCQ-SRFEKLNKQLGTKILS 536

Query: 92  --ISKDVKKFWTKIEKLV 107
             I+K V +FW   E L+
Sbjct: 537 HRIAKAVMQFWHSAELLL 554


>Glyma16g14060.1 
          Length = 1879

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 7/92 (7%)

Query: 13  ETKAKR--QKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKG 70
           E K KR  + +L +       K+HW  VLEEM WL+ DF  ER WK+A A ++  + +  
Sbjct: 457 EAKRKRIAELSLHSLSTQNHRKSHWGFVLEEMAWLANDFAQERLWKIAAAAQLGHQTA-- 514

Query: 71  FLDQATRGEKKMKRLRKVALN--ISKDVKKFW 100
                +R EK  ++L    L+  I+K V +FW
Sbjct: 515 -FTCRSRFEKLNRQLETKILSHRIAKAVMQFW 545