Miyakogusa Predicted Gene

Lj0g3v0361339.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0361339.1 Non Chatacterized Hit- tr|A5AP91|A5AP91_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,51.18,5e-16,domain in helicases and associated with SANT,HAS
subgroup; seg,NULL; SNF2 FAMILY CHROMODOMAIN-HELICA,CUFF.24920.1
         (316 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g17220.2                                                       416   e-116
Glyma09g17220.1                                                       416   e-116
Glyma02g29380.1                                                       350   9e-97
Glyma05g23990.1                                                       105   5e-23
Glyma08g46710.1                                                        60   3e-09
Glyma16g14060.1                                                        55   9e-08
Glyma18g36660.1                                                        55   9e-08

>Glyma09g17220.2 
          Length = 2009

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/328 (69%), Positives = 246/328 (75%), Gaps = 40/328 (12%)

Query: 1   MASKGPRFKFDHETKAKRQKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHA 60
           MASKGPR + DHE++AKRQK LEAP+EPRRPKTHWDHVLEEMVWLSKDFESERKWKLA A
Sbjct: 1   MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 61  KKVALKCSKGFLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMVLD 120
           KKVAL+ SKG LDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQM LD
Sbjct: 61  KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEKNSAEHH-----------ID 169
           EKKKKALDKQLEFLLGQTERYSTMLAENL D     K AE NSAEH            ++
Sbjct: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLGDPY---KSAENNSAEHRKSIHCKDLMLVVE 177

Query: 170 YQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQEELTALHDEMNLPIEELLKR 229
           YQSDA D+DEEY VQS               ALITKEERQEEL AL DEM+LPI+ELLKR
Sbjct: 178 YQSDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDEMDLPIQELLKR 237

Query: 230 YAGEKGELERPQISQEHSEDGAKIARTGDADENGDLSPVSKIGTNDSSVVPGRRCDESNG 289
           YAGEK                         +   DL  VSK+ T++SS+V GRRCDESNG
Sbjct: 238 YAGEK-------------------------ENRDDLLSVSKVDTSNSSMVSGRRCDESNG 272

Query: 290 DIATSTNNLSEYKDRQSENLKE-PSDTA 316
           D+AT TNNLS+ +D QSENLKE PS+TA
Sbjct: 273 DVATPTNNLSQCEDGQSENLKETPSETA 300


>Glyma09g17220.1 
          Length = 2009

 Score =  416 bits (1069), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/328 (69%), Positives = 246/328 (75%), Gaps = 40/328 (12%)

Query: 1   MASKGPRFKFDHETKAKRQKTLEAPKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHA 60
           MASKGPR + DHE++AKRQK LEAP+EPRRPKTHWDHVLEEMVWLSKDFESERKWKLA A
Sbjct: 1   MASKGPRSRIDHESRAKRQKALEAPREPRRPKTHWDHVLEEMVWLSKDFESERKWKLAQA 60

Query: 61  KKVALKCSKGFLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMVLD 120
           KKVAL+ SKG LDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQM LD
Sbjct: 61  KKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLVLYKHQMELD 120

Query: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEKNSAEHH-----------ID 169
           EKKKKALDKQLEFLLGQTERYSTMLAENL D     K AE NSAEH            ++
Sbjct: 121 EKKKKALDKQLEFLLGQTERYSTMLAENLGDPY---KSAENNSAEHRKSIHCKDLMLVVE 177

Query: 170 YQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQEELTALHDEMNLPIEELLKR 229
           YQSDA D+DEEY VQS               ALITKEERQEEL AL DEM+LPI+ELLKR
Sbjct: 178 YQSDAADNDEEYDVQSDDELEDDERTIEQDEALITKEERQEELAALRDEMDLPIQELLKR 237

Query: 230 YAGEKGELERPQISQEHSEDGAKIARTGDADENGDLSPVSKIGTNDSSVVPGRRCDESNG 289
           YAGEK                         +   DL  VSK+ T++SS+V GRRCDESNG
Sbjct: 238 YAGEK-------------------------ENRDDLLSVSKVDTSNSSMVSGRRCDESNG 272

Query: 290 DIATSTNNLSEYKDRQSENLKE-PSDTA 316
           D+AT TNNLS+ +D QSENLKE PS+TA
Sbjct: 273 DVATPTNNLSQCEDGQSENLKETPSETA 300


>Glyma02g29380.1 
          Length = 1967

 Score =  350 bits (899), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 198/288 (68%), Positives = 212/288 (73%), Gaps = 42/288 (14%)

Query: 42  MVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRKVALNISKDVK 101
           MVWLSKDFESERKWKLA AKKVAL+ SKG LDQATRGEKKMKEEEQRLRKVALNISKDVK
Sbjct: 1   MVWLSKDFESERKWKLAQAKKVALRASKGMLDQATRGEKKMKEEEQRLRKVALNISKDVK 60

Query: 102 KFWTKIEKLVLYKHQMVLDEKKKKALDKQLEFLLGQTERYSTMLAENLVDSTSADKPAEK 161
           KFWTKIEKLVLYKHQM LDEKKKKALDKQLEFLLGQTERYSTMLAENLVD     K AE 
Sbjct: 61  KFWTKIEKLVLYKHQMELDEKKKKALDKQLEFLLGQTERYSTMLAENLVDPY---KSAEN 117

Query: 162 NSAEHH-----------IDYQSDAPDHDEEYGVQSXXXXXXXXXXXXXXXALITKEERQE 210
           NSAEHH           ++YQSDA D+DEEY VQ                ALITKEERQE
Sbjct: 118 NSAEHHMSIQCKDLMLVVEYQSDAADNDEEYDVQYDDESEDDERTIEQDEALITKEERQE 177

Query: 211 ELTALHDEMNLPIEELLKRYAGEKGELERPQISQEHSEDGAKIARTGDADENG-DLSPVS 269
           EL AL DEM+LPIEELLKRYAG+K                          ENG DL  VS
Sbjct: 178 ELAALRDEMDLPIEELLKRYAGDK--------------------------ENGDDLLSVS 211

Query: 270 KIGTNDSSVVPGRRCDESNGDIATSTNNLSEYKDRQSENLKE-PSDTA 316
           KIGT++SS+V GRRCDESNGD+AT TNNLS+ ++ QSENLKE PS+TA
Sbjct: 212 KIGTSNSSIVSGRRCDESNGDVATPTNNLSQCENGQSENLKEVPSETA 259


>Glyma05g23990.1 
          Length = 88

 Score =  105 bits (263), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/90 (74%), Positives = 73/90 (81%), Gaps = 6/90 (6%)

Query: 82  MKEEEQRLRKVALNISKDVKKFWTKIEKL---VLYKHQMVLDEKKKKALDKQLEFLLGQT 138
           ++EEEQ LRKVALNI KDVKKFWTKIEKL    LYKHQM LD+KKKK LDKQLEFLLGQT
Sbjct: 1   VQEEEQPLRKVALNIFKDVKKFWTKIEKLYSFFLYKHQMELDKKKKKVLDKQLEFLLGQT 60

Query: 139 ERYSTMLAENLVDSTSADKPAEKNSAEHHI 168
           ERY+TMLAEN VD     K AE NS EH++
Sbjct: 61  ERYTTMLAENFVDPY---KSAENNSVEHYM 87


>Glyma08g46710.1 
          Length = 1896

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 9/102 (8%)

Query: 13  ETKAKRQKTLEA---PKEPRRPKTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSK 69
           E K KR   L     P +  R K+HW  VLEEM WL+ DF  ER WK+  A +++ + S 
Sbjct: 485 EVKRKRIAELSVRTLPSQIHR-KSHWGFVLEEMTWLANDFAQERLWKITAAAQLSHQAS- 542

Query: 70  GFLDQATRGEKKMKEEEQRLRKVALNISKDVKKFWTKIEKLV 111
                  R EK  + E   ++ ++ N++K V +FW  IE L+
Sbjct: 543 --FTSRLRFEK--QSEHLGVKILSHNMAKAVMQFWNSIELLL 580


>Glyma16g14060.1 
          Length = 1879

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 21/110 (19%)

Query: 32  KTHWDHVLEEMVWLSKDFESERKWKLAHAKKV----ALKCSKGFLDQATRGEKKMKEEEQ 87
           K+HW  VLEEM WL+ DF  ER WK+A A ++    A  C   F       EK  ++ E 
Sbjct: 478 KSHWGFVLEEMAWLANDFAQERLWKIAAAAQLGHQTAFTCRSRF-------EKLNRQLET 530

Query: 88  RLRKVALNISKDVKKFWTKIEKLVLYKHQMVLDEKKKKALDKQLEFLLGQ 137
           ++  ++  I+K V +FW        +  +++LD        +  +FL GQ
Sbjct: 531 KI--LSHRIAKAVMQFW--------HSAKLLLDNDLGINCIETSKFLEGQ 570


>Glyma18g36660.1 
          Length = 2122

 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 5/80 (6%)

Query: 32  KTHWDHVLEEMVWLSKDFESERKWKLAHAKKVALKCSKGFLDQATRGEKKMKEEEQRLRK 91
           K+ W  VLEEM WL+ DF  ER WK+  A +++ + +        R EK+ K    ++  
Sbjct: 587 KSRWGFVLEEMTWLANDFAQERLWKITAAAQLSHQAT---FTSRLRFEKQSKHLGVKI-- 641

Query: 92  VALNISKDVKKFWTKIEKLV 111
           ++ N++K V +FW  IE L+
Sbjct: 642 LSHNLAKAVMQFWNSIELLL 661