Miyakogusa Predicted Gene

Lj0g3v0360889.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360889.1 Non Chatacterized Hit- tr|D8SH47|D8SH47_SELML
Putative uncharacterized protein OS=Selaginella moelle,38.71,5e-16,
,CUFF.24856.1
         (93 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g17590.1                                                       106   7e-24
Glyma06g21390.1                                                        71   3e-13

>Glyma08g17590.1 
          Length = 304

 Score =  106 bits (264), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 48/60 (80%), Positives = 56/60 (93%)

Query: 1   MEAMWNHPEIHKVWSKSKQKQGKVRFTHDEKKRPYLSRVEIKAVADIVLFKYLNTLKIKS 60
           MEAMWNH E+ K W+KSKQKQGKVRF HDEKKRPYLSRVE+KA+ADI+L+KYL+T+KIKS
Sbjct: 172 MEAMWNHLEVRKEWNKSKQKQGKVRFAHDEKKRPYLSRVEMKAIADIILYKYLSTVKIKS 231


>Glyma06g21390.1 
          Length = 131

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/42 (80%), Positives = 37/42 (88%), Gaps = 1/42 (2%)

Query: 1  MEAMWNHPEIHKVWSKSKQKQGKVRFTHDEKKRPYLSRVEIK 42
          MEAMWNH E+ K W+KSKQKQGKVRF HDE KRPYLSRVE+K
Sbjct: 52 MEAMWNHLEVRKEWNKSKQKQGKVRFAHDE-KRPYLSRVEMK 92