Miyakogusa Predicted Gene
- Lj0g3v0360779.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0360779.1 tr|D7L8B8|D7L8B8_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_671772
PE,40,4e-19,seg,NULL; DUF4005,Domain of unknown function DUF4005;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,gene.g28344.t1.1
(212 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g20070.1 260 6e-70
Glyma10g05720.2 250 8e-67
Glyma10g05720.1 250 8e-67
Glyma03g33560.1 223 8e-59
Glyma19g36270.2 223 1e-58
Glyma19g36270.1 223 1e-58
Glyma05g11670.1 104 9e-23
Glyma17g23770.1 100 8e-22
Glyma20g31810.1 89 4e-18
Glyma10g35720.1 71 8e-13
>Glyma13g20070.1
Length = 379
Score = 260 bits (665), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/219 (64%), Positives = 149/219 (68%), Gaps = 8/219 (3%)
Query: 1 MFMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQ 58
MFMDPTNP+WGWSWLERWMA E +L KEKND S +SSSR ITSAEISKSFA+FQ
Sbjct: 162 MFMDPTNPAWGWSWLERWMAARPWESHSLMEKEKNDNKSLRSSSRGITSAEISKSFAKFQ 221
Query: 59 LNSENHSPTASQNPGSPNFQXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 113
LNSE HSPTASQNPGSPNF+
Sbjct: 222 LNSEKHSPTASQNPGSPNFESHSNPPKPSSPAVARKLKKASPKDILAIDDGTKSMVSVQS 281
Query: 114 XXERRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKGGFGT 173
RRHSIAGS + DDESLA YMVPTKSAKAKSRMQSP AAENGTP+KG GT
Sbjct: 282 ERPRRHSIAGSIVGDDESLASSPSIPS-YMVPTKSAKAKSRMQSPFAAENGTPDKGSSGT 340
Query: 174 AKKRLSFPASPARPRRHSGPPKVDSSLNAEITVGNGVAG 212
AKKRLSFPASPARPRRHSGPPKV+SS NAEITVGNGVAG
Sbjct: 341 AKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVAG 379
>Glyma10g05720.2
Length = 474
Score = 250 bits (638), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 146/223 (65%), Gaps = 12/223 (5%)
Query: 1 MFMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQ 58
MFMDPTNP+WGWSWLERW A E + KEKN S +SSSR ITSAEISK+FA+FQ
Sbjct: 253 MFMDPTNPAWGWSWLERWTAARPWESHSQMEKEKNGNKSLRSSSRGITSAEISKAFAKFQ 312
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXX 109
LNSE HSPTASQNPGSPNF+
Sbjct: 313 LNSEKHSPTASQNPGSPNFESHSQSHSNPPKPPSPAVAKKLKKASPKDILAIDDDTKSMI 372
Query: 110 XXXXXXERRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKG 169
RRHSIAGS + DDESLA YMVPTKSAKAKSRMQSPLAAE GTPEKG
Sbjct: 373 SVQSERPRRHSIAGSIVGDDESLASSPSIPS-YMVPTKSAKAKSRMQSPLAAEYGTPEKG 431
Query: 170 GFGTAKKRLSFPASPARPRRHSGPPKVDSSLNAEITVGNGVAG 212
GTAKKRLSFPASPARPRRHSGPPKV+SS NAEITVGNGVAG
Sbjct: 432 SSGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVAG 474
>Glyma10g05720.1
Length = 474
Score = 250 bits (638), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 146/223 (65%), Gaps = 12/223 (5%)
Query: 1 MFMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQ 58
MFMDPTNP+WGWSWLERW A E + KEKN S +SSSR ITSAEISK+FA+FQ
Sbjct: 253 MFMDPTNPAWGWSWLERWTAARPWESHSQMEKEKNGNKSLRSSSRGITSAEISKAFAKFQ 312
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXX 109
LNSE HSPTASQNPGSPNF+
Sbjct: 313 LNSEKHSPTASQNPGSPNFESHSQSHSNPPKPPSPAVAKKLKKASPKDILAIDDDTKSMI 372
Query: 110 XXXXXXERRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKG 169
RRHSIAGS + DDESLA YMVPTKSAKAKSRMQSPLAAE GTPEKG
Sbjct: 373 SVQSERPRRHSIAGSIVGDDESLASSPSIPS-YMVPTKSAKAKSRMQSPLAAEYGTPEKG 431
Query: 170 GFGTAKKRLSFPASPARPRRHSGPPKVDSSLNAEITVGNGVAG 212
GTAKKRLSFPASPARPRRHSGPPKV+SS NAEITVGNGVAG
Sbjct: 432 SSGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVAG 474
>Glyma03g33560.1
Length = 477
Score = 223 bits (569), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 141/217 (64%), Gaps = 8/217 (3%)
Query: 1 MFMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQ 58
MFMDPTNPSWGWSWLERWMA E ++ KE ND SS +SSSR IT EISKSFARFQ
Sbjct: 260 MFMDPTNPSWGWSWLERWMAARPWESRSHMDKELNDHSSVRSSSRSITGGEISKSFARFQ 319
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-- 116
LN E HSPTA QNPGSP+FQ +
Sbjct: 320 LNLEKHSPTACQNPGSPSFQSTPSKPASISAKKPKKVSPSPRGSWVTDEDSKSLVSVQSD 379
Query: 117 --RRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKGGFGTA 174
RRHSIAGS +RDDESLA YMVPT+SAKAKSR QSPLA ENG EKG FG+A
Sbjct: 380 RFRRHSIAGSLVRDDESLASSPAVPS-YMVPTQSAKAKSRTQSPLAPENGKAEKGSFGSA 438
Query: 175 KKRLSFPASPARPRRHSGPPKVD-SSLNAEITVGNGV 210
KKRLSFPASPARPRRHSGPPKV+ SSLNAE+ V GV
Sbjct: 439 KKRLSFPASPARPRRHSGPPKVESSSLNAELAVDKGV 475
>Glyma19g36270.2
Length = 477
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 143/217 (65%), Gaps = 8/217 (3%)
Query: 1 MFMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQ 58
MFMDPTNPSWGWSWLERWMA E ++ KE ND SS +SSSR IT EISKSFARFQ
Sbjct: 260 MFMDPTNPSWGWSWLERWMAARPWESRSHMDKELNDHSSIRSSSRSITGGEISKSFARFQ 319
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-- 116
LNSE HSPTASQNPGSP+FQ
Sbjct: 320 LNSEKHSPTASQNPGSPSFQSTPSKPASSSAKKPKKVSPSPRGSWVMDEDSKSLVSVHSD 379
Query: 117 --RRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKGGFGTA 174
RRHSIAGS++RDDESLA YMVPT+SAKAKSR QSPLA+EN EKG FG+A
Sbjct: 380 RFRRHSIAGSSVRDDESLASSPAVPS-YMVPTQSAKAKSRTQSPLASENAKAEKGSFGSA 438
Query: 175 KKRLSFPASPARPRRHSGPPKVD-SSLNAEITVGNGV 210
KKRLSFPASPARPRRHSGPPKV+ SSLNAE+ V GV
Sbjct: 439 KKRLSFPASPARPRRHSGPPKVESSSLNAELAVDKGV 475
>Glyma19g36270.1
Length = 477
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/217 (60%), Positives = 143/217 (65%), Gaps = 8/217 (3%)
Query: 1 MFMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKSSSRMITSAEISKSFARFQ 58
MFMDPTNPSWGWSWLERWMA E ++ KE ND SS +SSSR IT EISKSFARFQ
Sbjct: 260 MFMDPTNPSWGWSWLERWMAARPWESRSHMDKELNDHSSIRSSSRSITGGEISKSFARFQ 319
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-- 116
LNSE HSPTASQNPGSP+FQ
Sbjct: 320 LNSEKHSPTASQNPGSPSFQSTPSKPASSSAKKPKKVSPSPRGSWVMDEDSKSLVSVHSD 379
Query: 117 --RRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKGGFGTA 174
RRHSIAGS++RDDESLA YMVPT+SAKAKSR QSPLA+EN EKG FG+A
Sbjct: 380 RFRRHSIAGSSVRDDESLASSPAVPS-YMVPTQSAKAKSRTQSPLASENAKAEKGSFGSA 438
Query: 175 KKRLSFPASPARPRRHSGPPKVD-SSLNAEITVGNGV 210
KKRLSFPASPARPRRHSGPPKV+ SSLNAE+ V GV
Sbjct: 439 KKRLSFPASPARPRRHSGPPKVESSSLNAELAVDKGV 475
>Glyma05g11670.1
Length = 468
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/216 (39%), Positives = 105/216 (48%), Gaps = 20/216 (9%)
Query: 2 FMDPTNPSWGWSWLERWMAGA-ECQNLTAKEKNDQSSAKSS-SRMITSAEISKSFARFQL 59
FMDP NP WGWSWLERWMA + T + ND +S KS+ SR ++ EI+K + L
Sbjct: 262 FMDPNNPKWGWSWLERWMATRPRDGHSTVVDHNDHASVKSAASRAMSVGEITKLCS---L 318
Query: 60 NSENHSPTASQNPGSPNFQXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXE 116
+ SP Q P P Q
Sbjct: 319 QDKRPSPFG-QKPRRPAPQSSPSKTPSTNGKARPSSSKGSSVWGGDEGSRSMFSVQSERY 377
Query: 117 RRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKGGFGT-AK 175
RRHSIAGS++RDDESLA YM PT SAKA+S++ P +PEKGG A+
Sbjct: 378 RRHSIAGSSVRDDESLA-SSPAIPSYMAPTSSAKARSKIIRP------SPEKGGDSVFAR 430
Query: 176 KRLSFPASPARPRRHSGPPKVD--SSLNAEITVGNG 209
KRLSF S A RRHS PPKV+ S+ +A V NG
Sbjct: 431 KRLSFSPSSA-SRRHSDPPKVEMVSNNDAAAAVSNG 465
>Glyma17g23770.1
Length = 461
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 107/220 (48%), Gaps = 22/220 (10%)
Query: 2 FMDPTNPSWGWSWLERWMAGAECQ-NLTAKEKNDQSSAKSS-SRMITSAEISKSFARFQL 59
FMDP NP WGWSWLERWMA + T + ND +S KS+ SR ++ +I+K ++ L
Sbjct: 249 FMDPNNPQWGWSWLERWMATRPWDGHSTVVDHNDHASVKSAASRAVSVGQITKLYS---L 305
Query: 60 NSENHSPTASQ-NPGSPNFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXER- 117
+ SP S+ +P ER
Sbjct: 306 QDKKPSPFGSKARRPAPQSSHSKAPSTNGKARPSSSTKGSSVWGGDEDSRSMFSVQSERY 365
Query: 118 -RHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAENGTPEKGGFG---T 173
RHSIAGS++RDD+SLA YM T SAKA+S++ +PEK G G +
Sbjct: 366 RRHSIAGSSVRDDDSLA-STPAIPSYMAATSSAKARSKII------RHSPEKKGGGGSVS 418
Query: 174 AKKRLSF-PASPARPRRHSGPPKVDSSLN---AEITVGNG 209
A+KRLSF P+S A RRHS PPKV+ N A TV NG
Sbjct: 419 ARKRLSFSPSSAANSRRHSDPPKVEMVYNKDAAAATVSNG 458
>Glyma20g31810.1
Length = 489
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 91/203 (44%), Gaps = 18/203 (8%)
Query: 2 FMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKS-SSRMITSAEISKSFARFQ 58
FMDP NP WGW+WLERWMA E QN T +SAKS +S+ ++ EI+K ++
Sbjct: 260 FMDPNNPHWGWNWLERWMAARPWEGQNTTYHI--GHASAKSVASQTMSVGEITKLYSLRD 317
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXXXXXXXXXXXXXXXXXXX--------XXXXXXXXX 110
N++ ASQ P P
Sbjct: 318 QNNDIKISPASQKPTCPPSHNSPSTTASKVPLANGAKAKVLSSPRGGSWGSDGDSKNMFS 377
Query: 111 XXXXXERRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAE--NGTPEK 168
RRHSI S +RDDES + V TK+ + S+++S L E NGTPEK
Sbjct: 378 KTSENSRRHSIGVSQVRDDESNSSSSPSTK---VATKAKSSSSKVRSALVGEHSNGTPEK 434
Query: 169 GGFGTAKKRLSFPASPARPRRHS 191
KKRLSFPASPA RR++
Sbjct: 435 AASALIKKRLSFPASPAGTRRYA 457
>Glyma10g35720.1
Length = 323
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 83/202 (41%), Gaps = 14/202 (6%)
Query: 2 FMDPTNPSWGWSWLERWMAGA--ECQNLTAKEKNDQSSAKS-SSRMITSAEISKSFARFQ 58
FMDP NP WGW+WLERWMA E QN T +SAKS +S+ ++ EI+K ++
Sbjct: 99 FMDPNNPHWGWNWLERWMAARPWEGQNTTYHI--GHASAKSVASQTMSVGEITKLYSLRD 156
Query: 59 LNSENHSPTASQNPGSPNFQXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXX 110
N++ + A+Q P P
Sbjct: 157 QNNDIKTSPANQKPTRPCSHNSPSTTPSKVPLANGAKTKVLSSSRGGSWGGDGDSKSMFS 216
Query: 111 XXXXXERRHSIAGSTIRDDESLAXXXXXXXXYMVPTKSAKAKSRMQSPLAAE-NGTPEKG 169
RRHSI S +RDDES + S+ + + NGTPEK
Sbjct: 217 KNLENTRRHSIGVSQVRDDESNSSSSPSTKVATKVKSSSSSSKVRSASFGVHRNGTPEKA 276
Query: 170 GFGTAKKRLSFPASPARPRRHS 191
KKRLS PASPA RR++
Sbjct: 277 TSAPLKKRLSSPASPAGIRRYA 298