Miyakogusa Predicted Gene

Lj0g3v0360179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0360179.1 Non Chatacterized Hit- tr|I1LKD2|I1LKD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23913
PE,52.27,3e-16,seg,NULL,CUFF.24917.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g15860.1                                                        65   2e-11

>Glyma11g15860.1 
          Length = 388

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 59/132 (44%), Gaps = 31/132 (23%)

Query: 1   MAETSS---DHTPHIPIEIITDDEMALIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 57
           MAETSS   DH  HIPIEII+DDEMALIE                               
Sbjct: 1   MAETSSTEEDHN-HIPIEIISDDEMALIEAAFAFASTRTFSSLRSSSSSKLPLCTNAL-- 57

Query: 58  XXXXXXXXXXXIKSITVLSKRSFSHATGSGTSTHHPDIED-SSPKLKTLLPDSFLHRFRK 116
                        SIT LSKR  S            DIED  + K K  L DSFLHRFR 
Sbjct: 58  -------------SITPLSKRKLSS-----------DIEDLPTCKKKHTLSDSFLHRFRN 93

Query: 117 NRGLSVTDITST 128
            RGLSVTD+TST
Sbjct: 94  KRGLSVTDLTST 105