Miyakogusa Predicted Gene

Lj0g3v0359789.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359789.1 tr|A9T0W7|A9T0W7_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_217831,58.57,2e-19,no description,Nucleotide-binding,
alpha-beta plait; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
,CUFF.24763.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g42150.2                                                       147   2e-36
Glyma19g44860.1                                                       147   2e-36
Glyma03g42150.1                                                       147   2e-36
Glyma03g35450.2                                                       100   4e-22
Glyma03g35450.1                                                       100   4e-22
Glyma12g09530.1                                                        97   3e-21
Glyma12g09530.2                                                        96   1e-20
Glyma11g18940.2                                                        96   1e-20
Glyma11g18940.1                                                        96   1e-20

>Glyma03g42150.2 
          Length = 449

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/76 (89%), Positives = 71/76 (93%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + VEGVGPGVE+IELIKDPQNPS+NRGFAFVLYYNNACADYSRQKM SSSF L GNTPTV
Sbjct: 204 KVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMASSSFKLDGNTPTV 263

Query: 99  RWADPKNSPDHSASSQ 114
            WADPKNSPDHSASSQ
Sbjct: 264 TWADPKNSPDHSASSQ 279


>Glyma19g44860.1 
          Length = 483

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/76 (89%), Positives = 71/76 (93%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + VEGVGPGVE+IELIKDPQNPS+NRGFAFVLYYNNACADYSRQKM SSSF L GNTPTV
Sbjct: 204 KVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMASSSFKLDGNTPTV 263

Query: 99  RWADPKNSPDHSASSQ 114
            WADPKNSPDHSASSQ
Sbjct: 264 TWADPKNSPDHSASSQ 279


>Glyma03g42150.1 
          Length = 483

 Score =  147 bits (371), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/76 (89%), Positives = 71/76 (93%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + VEGVGPGVE+IELIKDPQNPS+NRGFAFVLYYNNACADYSRQKM SSSF L GNTPTV
Sbjct: 204 KVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNACADYSRQKMASSSFKLDGNTPTV 263

Query: 99  RWADPKNSPDHSASSQ 114
            WADPKNSPDHSASSQ
Sbjct: 264 TWADPKNSPDHSASSQ 279


>Glyma03g35450.2 
          Length = 467

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 55/68 (80%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + V  +GPGV  +EL+KDPQN S+NRG+AF+ YYN+ACA+YSRQKM +S+F L  N PTV
Sbjct: 204 KVVAEIGPGVICVELLKDPQNSSRNRGYAFIEYYNHACAEYSRQKMSNSNFKLGSNAPTV 263

Query: 99  RWADPKNS 106
            WADP+NS
Sbjct: 264 SWADPRNS 271


>Glyma03g35450.1 
          Length = 467

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 43/68 (63%), Positives = 55/68 (80%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + V  +GPGV  +EL+KDPQN S+NRG+AF+ YYN+ACA+YSRQKM +S+F L  N PTV
Sbjct: 204 KVVAEIGPGVICVELLKDPQNSSRNRGYAFIEYYNHACAEYSRQKMSNSNFKLGSNAPTV 263

Query: 99  RWADPKNS 106
            WADP+NS
Sbjct: 264 SWADPRNS 271


>Glyma12g09530.1 
          Length = 652

 Score = 97.4 bits (241), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 46/77 (59%), Positives = 59/77 (76%), Gaps = 1/77 (1%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + V  +GPGV  +EL+KD +N + NRGFAF+ YYN+ACA+YSRQKM S +F L  N PTV
Sbjct: 226 KIVTEIGPGVTGVELVKDMKNTNNNRGFAFIDYYNHACAEYSRQKMMSPTFKLGENAPTV 285

Query: 99  RWADPKNSPDHSASSQD 115
            WADPKN+ + SA+SQD
Sbjct: 286 SWADPKNA-ESSAASQD 301


>Glyma12g09530.2 
          Length = 411

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + V  +GPGV  +EL+KD +N + NRGFAF+ YYN+ACA+YSRQKM S +F L  N PTV
Sbjct: 128 KIVTEIGPGVTGVELVKDMKNTNNNRGFAFIDYYNHACAEYSRQKMMSPTFKLGENAPTV 187

Query: 99  RWADPKNSPDHSASSQ 114
            WADPKN+ + SA+SQ
Sbjct: 188 SWADPKNA-ESSAASQ 202


>Glyma11g18940.2 
          Length = 505

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + V  +GPGV  +EL+KD +N + NRGFAF+ YYN+ACA+YSRQKM S +F L  N PTV
Sbjct: 222 KIVTEIGPGVTGVELVKDMKNTNNNRGFAFIDYYNHACAEYSRQKMMSPTFKLGENAPTV 281

Query: 99  RWADPKNSPDHSASSQ 114
            WADPKN+ + SA+SQ
Sbjct: 282 SWADPKNA-ESSAASQ 296


>Glyma11g18940.1 
          Length = 505

 Score = 95.5 bits (236), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 58/76 (76%), Gaps = 1/76 (1%)

Query: 39  QAVEGVGPGVESIELIKDPQNPSKNRGFAFVLYYNNACADYSRQKMPSSSFNLCGNTPTV 98
           + V  +GPGV  +EL+KD +N + NRGFAF+ YYN+ACA+YSRQKM S +F L  N PTV
Sbjct: 222 KIVTEIGPGVTGVELVKDMKNTNNNRGFAFIDYYNHACAEYSRQKMMSPTFKLGENAPTV 281

Query: 99  RWADPKNSPDHSASSQ 114
            WADPKN+ + SA+SQ
Sbjct: 282 SWADPKNA-ESSAASQ 296