Miyakogusa Predicted Gene

Lj0g3v0359629.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359629.1 tr|B9IFZ5|B9IFZ5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_777717 PE=4
SV=1,43.87,1e-16,seg,NULL,CUFF.24750.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g16890.1                                                        94   5e-20
Glyma01g25910.1                                                        70   1e-12

>Glyma03g16890.1 
          Length = 168

 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 84/159 (52%), Gaps = 24/159 (15%)

Query: 14  ANILLGLAMATTNKPQNTFQSISAPCSNAPSQS-----------PSIGRKLGRHH----- 57
           AN LL L  AT+ +PQ  FQS+SAP SN P+QS           PSIGRKLG+H      
Sbjct: 13  ANPLLSLTNATS-QPQIIFQSLSAPSSNPPAQSPSIGQRPHTSEPSIGRKLGKHQHNQIR 71

Query: 58  ---SPTPSPSIAPXXXXXXXXXXXXXITNYHQRASVEAGGE-VLGS-KGQVHLLSHHHHS 112
              + +P+PS AP             I + HQR S+E   E VLGS  GQVHLL H HH 
Sbjct: 72  SSDTKSPTPSEAPQNEKNMHSISEGSIPS-HQRTSIEPHDEAVLGSHHGQVHLLKHRHH- 129

Query: 113 FDRSXXXXXXXXXXXXXXFFVAVFCYIRATRRHEFETNS 151
             +S              F V+VFCYIRATRR++ ET +
Sbjct: 130 HSKSIAGAGVILAGLAATFLVSVFCYIRATRRNKIETTA 168


>Glyma01g25910.1 
          Length = 106

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 58  SPTPSPSIAPXXXXXXXXXXXXXITNYHQRASVEA-GGEVLGSK-GQVHLLSHHHHSFDR 115
           + +P+PS AP             I + HQR S+E   GEVLGS  GQVHL    HHSFD+
Sbjct: 12  TKSPTPSEAPQSEKKMHSISEGSIPS-HQRTSIEPHDGEVLGSHHGQVHLSKQRHHSFDK 70

Query: 116 SXXXXXXXXXXXXXXFFVAVFCYIRATRRHEFETNS 151
           S              F V+VFCYIRATRR++ ET +
Sbjct: 71  SRAGAGVILVGLATTFLVSVFCYIRATRRNKLETTA 106