Miyakogusa Predicted Gene

Lj0g3v0359529.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359529.1 Non Chatacterized Hit- tr|G7IRK2|G7IRK2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,52.76,5e-17,seg,NULL,CUFF.24741.1
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g38020.1                                                       107   4e-24
Glyma06g45670.1                                                        72   2e-13
Glyma12g11160.1                                                        62   2e-10

>Glyma13g38020.1 
          Length = 129

 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 1/127 (0%)

Query: 1   MTRVGFVFVFVLVTQILVLQALALKSEAKSEPPMSMELKTQREVQPSDQKTEKLXXXXXX 60
           M +VGFVF+ V +TQI++LQA+AL+SEA       +E+K QREV+ SDQK +K+      
Sbjct: 1   MNKVGFVFLLV-ITQIILLQAMALESEAPMPGLNPLEVKIQREVKVSDQKRDKVVVQPVA 59

Query: 61  XXXXXXREEGKSKAEEEVAEAPHNRRMGKHHSTDKSVXXXXXXXXXXXXXXFAAVFCYIR 120
                     + +++ E AEAP  R++GKHHS DKSV              FAAVFCYIR
Sbjct: 60  GSRGSSSSHEEGESKAEEAEAPSIRKLGKHHSADKSVAGGSVILGGLVTVTFAAVFCYIR 119

Query: 121 VTRKRDS 127
           VTRKRD+
Sbjct: 120 VTRKRDN 126


>Glyma06g45670.1 
          Length = 133

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 9/132 (6%)

Query: 2   TRVGFVFVFVLVTQILVLQALALKSEAKSEPPMSM----ELKTQREVQ--PSDQKTEKLX 55
            R+G V +  L+ QILVL   A +S+ +++ P+++    E KTQ  VQ    DQ ++   
Sbjct: 3   NRLGLVVL--LLAQILVLHVKAHESD-QAQAPLTVLNPFEHKTQTGVQLHDDDQNSDHKV 59

Query: 56  XXXXXXXXXXXREEGKSKAEEEVAEAPHNRRMGKHHSTDKSVXXXXXXXXXXXXXXFAAV 115
                        E KS    E AEAP  RRMGKHHS+D+SV              FAAV
Sbjct: 60  AVSGAIEESPSSSEEKSGESNEAAEAPQIRRMGKHHSSDRSVAGGGVIIGGLVTAIFAAV 119

Query: 116 FCYIRVTRKRDS 127
           FCYIRVTR+RD+
Sbjct: 120 FCYIRVTRRRDT 131


>Glyma12g11160.1 
          Length = 65

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 37/59 (62%)

Query: 69  EGKSKAEEEVAEAPHNRRMGKHHSTDKSVXXXXXXXXXXXXXXFAAVFCYIRVTRKRDS 127
           E +   E + AEAP  RR+GKHHS+DKSV              FAAVFCYIRVTR+RD+
Sbjct: 5   EEEKNGEAKAAEAPQIRRIGKHHSSDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRRRDT 63