Miyakogusa Predicted Gene

Lj0g3v0359119.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0359119.1 tr|D4HTS9|D4HTS9_9MAGN ARF4 protein OS=Cabomba
aquatica GN=ARF4 PE=2 SV=1,27.71,2e-16, ,CUFF.24706.1
         (321 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g29280.3                                                       388   e-108
Glyma12g29280.2                                                       387   e-108
Glyma12g07560.1                                                       387   e-108
Glyma11g15910.1                                                       372   e-103
Glyma12g29280.1                                                       369   e-102
Glyma13g40310.1                                                       349   2e-96
Glyma13g24240.1                                                        69   6e-12
Glyma13g30750.1                                                        68   1e-11
Glyma13g30750.2                                                        67   3e-11
Glyma06g17320.1                                                        53   4e-07
Glyma06g17320.2                                                        53   4e-07
Glyma04g37760.1                                                        53   4e-07
Glyma07g32300.1                                                        52   9e-07

>Glyma12g29280.3 
          Length = 792

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 232/315 (73%), Gaps = 20/315 (6%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWDE+I+ NHQDRVSPW++DPS  LPP++IQSS RLKKLR GL  A+P+ L T S SG 
Sbjct: 372 VRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSSRRLKKLRPGLLAAAPNHLTTGS-SGF 430

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTEL 134
           M  EESVRS KVLQGQEN GF+SLYYGCDT+T +  FE+ SPSH NLAS GV K+ + E 
Sbjct: 431 MDSEESVRSSKVLQGQENTGFMSLYYGCDTVTKQPEFEIRSPSHPNLASTGVRKIAAAEF 490

Query: 135 MSVHPFSYAAGFMETNSFPRVLQGQEICPMKSLTGKVDLSLGAWGKPNGSCTTFNLHQAT 194
           M VHP SY AGF ETN FPRVLQGQEICP +SL GKVDL+ G+WGKPN S T +NLHQAT
Sbjct: 491 MRVHPSSY-AGFTETNMFPRVLQGQEICPFRSLAGKVDLNFGSWGKPNVSYTNYNLHQAT 549

Query: 195 NPSFPS--------AYFPYGDIHNVGH-ASMFGSKPPTFQRENVSFNTPFSQAGIIRNEV 245
            P+F S        AYFPYGDIH  G  +SM  S P  FQRE++ FNTP  Q+GI     
Sbjct: 550 KPNFHSFGPEVVQTAYFPYGDIHKAGQGSSMLCSNPTNFQREDIPFNTPSIQSGIT---- 605

Query: 246 GRSDLPNEHKLQDNISVSASLGGADMRILDDNNVKANVNSCKLFGFPLSGETSPQNLQNP 305
               +PNE KLQDNIS +ASL GA+MRI +D+N K  VN+CKLFGFPLS ET+ QNLQN 
Sbjct: 606 ----IPNEQKLQDNISGAASL-GANMRIPNDDNFKGKVNACKLFGFPLSRETTAQNLQNS 660

Query: 306 AKRSCTKVRDDNKMI 320
           +KRSCTKV     ++
Sbjct: 661 SKRSCTKVHKQGSLV 675


>Glyma12g29280.2 
          Length = 660

 Score =  387 bits (995), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/315 (63%), Positives = 232/315 (73%), Gaps = 20/315 (6%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWDE+I+ NHQDRVSPW++DPS  LPP++IQSS RLKKLR GL  A+P+ L T S SG 
Sbjct: 240 VRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSSRRLKKLRPGLLAAAPNHLTTGS-SGF 298

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTEL 134
           M  EESVRS KVLQGQEN GF+SLYYGCDT+T +  FE+ SPSH NLAS GV K+ + E 
Sbjct: 299 MDSEESVRSSKVLQGQENTGFMSLYYGCDTVTKQPEFEIRSPSHPNLASTGVRKIAAAEF 358

Query: 135 MSVHPFSYAAGFMETNSFPRVLQGQEICPMKSLTGKVDLSLGAWGKPNGSCTTFNLHQAT 194
           M VHP SY AGF ETN FPRVLQGQEICP +SL GKVDL+ G+WGKPN S T +NLHQAT
Sbjct: 359 MRVHPSSY-AGFTETNMFPRVLQGQEICPFRSLAGKVDLNFGSWGKPNVSYTNYNLHQAT 417

Query: 195 NPSFPS--------AYFPYGDIHNVGH-ASMFGSKPPTFQRENVSFNTPFSQAGIIRNEV 245
            P+F S        AYFPYGDIH  G  +SM  S P  FQRE++ FNTP  Q+GI     
Sbjct: 418 KPNFHSFGPEVVQTAYFPYGDIHKAGQGSSMLCSNPTNFQREDIPFNTPSIQSGIT---- 473

Query: 246 GRSDLPNEHKLQDNISVSASLGGADMRILDDNNVKANVNSCKLFGFPLSGETSPQNLQNP 305
               +PNE KLQDNIS +ASL GA+MRI +D+N K  VN+CKLFGFPLS ET+ QNLQN 
Sbjct: 474 ----IPNEQKLQDNISGAASL-GANMRIPNDDNFKGKVNACKLFGFPLSRETTAQNLQNS 528

Query: 306 AKRSCTKVRDDNKMI 320
           +KRSCTKV     ++
Sbjct: 529 SKRSCTKVHKQGSLV 543


>Glyma12g07560.1 
          Length = 776

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 201/313 (64%), Positives = 233/313 (74%), Gaps = 35/313 (11%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVA---SPSQLVTAS- 70
           VRWDE+I+ NHQDRVSPW+IDPS  LPP++IQSSPRLKKLRTGLQ+    +  ++  +S 
Sbjct: 376 VRWDEDIETNHQDRVSPWEIDPSAPLPPLSIQSSPRLKKLRTGLQIKFSINTCKIHRSSR 435

Query: 71  ---GSGMMGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVG 127
              GSG++GFEESVRSPKVLQGQENAGFVS YYGCDT+T   GFEM+SPSH NL SA V 
Sbjct: 436 RTRGSGLVGFEESVRSPKVLQGQENAGFVSFYYGCDTVTKPPGFEMSSPSHPNLGSAEVR 495

Query: 128 KVTSTELMSVHPFSYAAGFMETNSFPRVLQGQEICPMKSLTGKVDLSLGAWGKPNGSCTT 187
           KV+S+EL SVHPFSY AGF+ETN FPRVLQGQEIC +KSLTGK                 
Sbjct: 496 KVSSSELNSVHPFSY-AGFVETNRFPRVLQGQEICSLKSLTGK----------------- 537

Query: 188 FNLHQATNPSFPSAYFPYGDIHNVGHASMFGSKPPTFQRENVSFNTPFSQAGIIRNEVGR 247
                AT P+F  + FPYGDIH  G AS+F SK  TFQRENV FN P +QAGII NEVGR
Sbjct: 538 -----ATKPNFQPSLFPYGDIHQAGQASLFCSKSTTFQRENVPFNKPSTQAGIIVNEVGR 592

Query: 248 SDLPNEHKLQDNISVSASLGGADMRILDDNNVKANVNSCKLFGFPLSGETSPQNLQNPAK 307
           SDLPNEHKLQDNIS +A++G     + +DNNV+  VN+CKLFGF LSGET+ QNLQN AK
Sbjct: 593 SDLPNEHKLQDNISSAANMG-----VSNDNNVQGKVNACKLFGFSLSGETTAQNLQNSAK 647

Query: 308 RSCTKVRDDNKMI 320
           RSCTKV     ++
Sbjct: 648 RSCTKVHKQGSLV 660


>Glyma11g15910.1 
          Length = 747

 Score =  372 bits (954), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/308 (63%), Positives = 224/308 (72%), Gaps = 30/308 (9%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQ-VASPSQLVTASGSG 73
           VRWDE+I+ NH+DRVSPW+IDPS  LPP++IQSSPRLKKLRTGLQ         +A G G
Sbjct: 352 VRWDEDIETNHKDRVSPWEIDPSAPLPPLSIQSSPRLKKLRTGLQKFIQDLSKESARGRG 411

Query: 74  MMGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTE 133
           ++ FEESVRSPKVLQGQENAGF SLYYGCDT+T   GFEM+S SH NL SA V K+TS+E
Sbjct: 412 LIDFEESVRSPKVLQGQENAGFGSLYYGCDTVTKPPGFEMSSQSHPNLGSAEVRKITSSE 471

Query: 134 LMSVHPFSYAAGFMETNSFPRVLQGQEICPMKSLTGKVDLSLGAWGKPNGSCTTFNLHQA 193
           L SVHPFSY AGF+ETN FPRVLQGQEICP+KSLTGK                      A
Sbjct: 472 LSSVHPFSY-AGFVETNRFPRVLQGQEICPLKSLTGK----------------------A 508

Query: 194 TNPSFPSAYFPYGDIHNVGHASMFGSKPPTFQRENVSFNTPFSQAGIIRNEVGRSDLPNE 253
           T PSF  + FPYGDIH    AS+F SK  TFQRENV FN P +QAGII NEVGRSDLPN+
Sbjct: 509 TKPSFQLSLFPYGDIHQASQASLFCSKSTTFQRENVPFNKPSTQAGIIVNEVGRSDLPND 568

Query: 254 HKLQ-DNISVSASLGGADMRILDDNNVKANVNSCKLFGFPLSGETSPQNLQNPAKRSCTK 312
           HKLQ +NIS + ++G     +  DNNV+  VN+CKLFGF LSGET+ QNLQN AKRSCTK
Sbjct: 569 HKLQGNNISAAGNMG-----VSIDNNVQGKVNACKLFGFSLSGETTTQNLQNSAKRSCTK 623

Query: 313 VRDDNKMI 320
           V     ++
Sbjct: 624 VHKQGSLV 631


>Glyma12g29280.1 
          Length = 800

 Score =  369 bits (948), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/315 (60%), Positives = 223/315 (70%), Gaps = 31/315 (9%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWDE+I+ NHQDRVSPW++DPS  LPP++IQSS RLKKLR                SG 
Sbjct: 385 VRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSSRRLKKLRP------------VGSSGF 432

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTEL 134
           M  EESVRS KVLQGQEN GF+SLYYGCDT+T +  FE+ SPSH NLAS GV K+ + E 
Sbjct: 433 MDSEESVRSSKVLQGQENTGFMSLYYGCDTVTKQPEFEIRSPSHPNLASTGVRKIAAAEF 492

Query: 135 MSVHPFSYAAGFMETNSFPRVLQGQEICPMKSLTGKVDLSLGAWGKPNGSCTTFNLHQAT 194
           M VHP SY AGF ETN FPRVLQGQEICP +SL GKVDL+ G+WGKPN S T +NLHQAT
Sbjct: 493 MRVHPSSY-AGFTETNMFPRVLQGQEICPFRSLAGKVDLNFGSWGKPNVSYTNYNLHQAT 551

Query: 195 NPSFPS--------AYFPYGDIHNVGH-ASMFGSKPPTFQRENVSFNTPFSQAGIIRNEV 245
            P+F S        AYFPYGDIH  G  +SM  S P  FQRE++ FNTP  Q+GI     
Sbjct: 552 KPNFHSFGPEVVQTAYFPYGDIHKAGQGSSMLCSNPTNFQREDIPFNTPSIQSGIT---- 607

Query: 246 GRSDLPNEHKLQDNISVSASLGGADMRILDDNNVKANVNSCKLFGFPLSGETSPQNLQNP 305
               +PNE KLQDNIS +ASL GA+MRI +D+N K  VN+CKLFGFPLS ET+ QNLQN 
Sbjct: 608 ----IPNEQKLQDNISGAASL-GANMRIPNDDNFKGKVNACKLFGFPLSRETTAQNLQNS 662

Query: 306 AKRSCTKVRDDNKMI 320
           +KRSCTKV     ++
Sbjct: 663 SKRSCTKVHKQGSLV 677


>Glyma13g40310.1 
          Length = 796

 Score =  349 bits (896), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 190/315 (60%), Positives = 220/315 (69%), Gaps = 35/315 (11%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWDE+I+ +HQDRVSPW+IDPS  LPP++IQSS RLKKLR GLQ A+PS L TA GSG 
Sbjct: 391 VRWDEDIEISHQDRVSPWEIDPSSSLPPLSIQSSRRLKKLRPGLQAATPSHLTTAGGSGF 450

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTEL 134
           M  EESVRS KVLQGQEN GF+SLYYGCD +T +  FE+ SPSH NLAS GV K+++ E 
Sbjct: 451 MDSEESVRSSKVLQGQENTGFMSLYYGCDKVTKQPEFEIRSPSHPNLASTGVRKISAAEF 510

Query: 135 MSVHPFSYAAGFMETNSFPRVLQGQEICPMKSLTGKVDLSLGAWGKPNGSCTTFNLHQAT 194
           M VHP S+ AGF ETN  PRVL GQEI            S+GA  KPN S +  NLHQAT
Sbjct: 511 MRVHPSSF-AGFSETNIVPRVLHGQEI------------SVGA--KPNVSYSNNNLHQAT 555

Query: 195 NPSFPS--------AYFPYGDIHNVGH-ASMFGSKPPTFQRENVSFNTPFSQAGIIRNEV 245
            PSF S        AYFPYGDIHN G  +S+  SKP  FQREN+ FNTP +Q+GI+RNE 
Sbjct: 556 KPSFHSLGPEVIQTAYFPYGDIHNAGQGSSILCSKPTNFQRENIPFNTPSTQSGIMRNE- 614

Query: 246 GRSDLPNEHKLQDNISVSASLGGADMRILDDNNVKANVNSCKLFGFPLSGETSPQNLQNP 305
                    KLQDNIS +ASL GA+MRI  D+N K  V +CKLFG  LSGET+ QNLQN 
Sbjct: 615 ---------KLQDNISGTASL-GANMRIPKDDNFKGQVKACKLFGISLSGETTAQNLQNS 664

Query: 306 AKRSCTKVRDDNKMI 320
           AKRSCTKV     ++
Sbjct: 665 AKRSCTKVHKQGSLV 679


>Glyma13g24240.1 
          Length = 719

 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 74/154 (48%), Gaps = 11/154 (7%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWD +++A   +RVSPW+I+PSG     N   S  LK+ + GL  A       ++  G 
Sbjct: 349 VRWD-DLEATRHNRVSPWEIEPSGSASTANNLMSAGLKRTKIGLPSAK-LDFPVSNAIGT 406

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTN-----RRGFEMNSPSHQNLASAGVGKV 129
             F ES+R  KVLQGQE  G  + Y   +  ++     RR +    P       A  G  
Sbjct: 407 SDFGESLRFQKVLQGQEMLGVNTTYDSFNAQSHQLSDLRRCY----PGSNYPRIAATGNS 462

Query: 130 TSTELMSVHPFSYAAGFMETNSFPRVLQGQEICP 163
                +S +  +   GF E+  F +VLQGQEI P
Sbjct: 463 IGISQVSSNVSNNGIGFSESFRFQKVLQGQEILP 496


>Glyma13g30750.1 
          Length = 735

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/153 (35%), Positives = 79/153 (51%), Gaps = 9/153 (5%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWD +I+A  ++RVSPW+I+PSG     +   S  LK+ R G+  +   +  T  G G 
Sbjct: 366 VRWD-DIEAARRNRVSPWEIEPSGSASNSSNLMSAGLKRTRIGM-TSVKLEFPTPDGIGA 423

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTEL 134
             F ES+R  KVLQGQE  G  + + G +  + R  +E+    +     +G+   T   +
Sbjct: 424 SDFGESLRFRKVLQGQEILGVNTPFDGINAQSPRL-YELGR-CYPGSNCSGIPP-TGNNI 480

Query: 135 MSVHPFS----YAAGFMETNSFPRVLQGQEICP 163
              HP S       GF E+  F +VLQGQEI P
Sbjct: 481 RMPHPASDFSCNGIGFSESFRFQKVLQGQEILP 513


>Glyma13g30750.2 
          Length = 686

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 29/149 (19%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWD +I+A  ++RVSPW+I+PSG     +   S  LK+ R G+  +   +  T  G G 
Sbjct: 367 VRWD-DIEAARRNRVSPWEIEPSGSASNSSNLMSAGLKRTRIGM-TSVKLEFPTPDGIGA 424

Query: 75  MGFEESVRSPKVLQGQENAGFVSLYYGCDTLTNRRGFEMNSPSHQNLASAGVGKVTSTEL 134
             F ES+R  KVLQGQE  G  + + G +  + R                        EL
Sbjct: 425 SDFGESLRFRKVLQGQEILGVNTPFDGINAQSPRL----------------------YEL 462

Query: 135 MSVHPFSYAAGFMETNSFPRVLQGQEICP 163
              +P     GF E+  F +VLQGQEI P
Sbjct: 463 GRCYP-----GFSESFRFQKVLQGQEILP 486


>Glyma06g17320.1 
          Length = 843

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 14  QVRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASP-SQLVTASGS 72
           +VRWDE  +    +RVSPW I+P+   P +N  S PR K+ R+    +SP S ++T   S
Sbjct: 350 KVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREAS 409

Query: 73  GMMGFEESVRS--PKVLQGQE 91
             +  + S  +  P+VLQGQE
Sbjct: 410 SKVSIDPSPANGFPRVLQGQE 430


>Glyma06g17320.2 
          Length = 781

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 14  QVRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASP-SQLVTASGS 72
           +VRWDE  +    +RVSPW I+P+   P +N  S PR K+ R+    +SP S ++T   S
Sbjct: 350 KVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREAS 409

Query: 73  GMMGFEESVRS--PKVLQGQE 91
             +  + S  +  P+VLQGQE
Sbjct: 410 SKVSIDPSPANGFPRVLQGQE 430


>Glyma04g37760.1 
          Length = 843

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 14  QVRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASP-SQLVTASGS 72
           +VRWDE  +    +RVSPW I+P+   P +N  S PR K+ R+    +SP S ++T   S
Sbjct: 350 KVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREAS 409

Query: 73  GMMGFEESVRS--PKVLQGQE 91
             +  + S  +  P+VLQGQE
Sbjct: 410 SKVSIDPSPANGFPRVLQGQE 430


>Glyma07g32300.1 
          Length = 633

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 8/77 (10%)

Query: 15  VRWDENIDANHQDRVSPWDIDPSGHLPPMNIQSSPRLKKLRTGLQVASPSQLVTASGSGM 74
           VRWD +++    +RVSPW+I+PSG     N   S  LK+ + GL  A     V++     
Sbjct: 344 VRWD-DLEVTRHNRVSPWEIEPSGSASTANNLMSAGLKRTKIGLPSAKLEFPVSS----- 397

Query: 75  MGFEESVRSPKVLQGQE 91
             F ES R  KVLQGQE
Sbjct: 398 --FSESFRFQKVLQGQE 412