Miyakogusa Predicted Gene

Lj0g3v0358459.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0358459.1 tr|B9HBR7|B9HBR7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_561442 PE=4 SV=1,54.05,2e-19,
,CUFF.24659.1
         (108 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g31220.1                                                       145   1e-35
Glyma13g39080.2                                                       144   2e-35
Glyma13g39080.1                                                       144   2e-35
Glyma12g31220.2                                                       132   6e-32

>Glyma12g31220.1 
          Length = 108

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 80/108 (74%)

Query: 1   MSRPMXXXXXXXXXXXTSQFEWKQPLVADVDSNPNVSQKQRQISKPEETVKEKIILVQEK 60
           MSRPM           TSQFEWKQ LVADVDSNP+VSQKQ QISK  ETVKEKIILVQEK
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEK 60

Query: 61  NIRRLNELVRHLQEQLQQCRXXXXXXXXXXXXLTERILELERQQILED 108
           NIRRLNELVRHLQEQLQQCR            L ERILELERQQILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>Glyma13g39080.2 
          Length = 108

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 80/108 (74%)

Query: 1   MSRPMXXXXXXXXXXXTSQFEWKQPLVADVDSNPNVSQKQRQISKPEETVKEKIILVQEK 60
           MSRPM           TSQFEWKQ LVADVDSNPN+ QKQ QISK EETVKEKIILVQEK
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPNLPQKQHQISKAEETVKEKIILVQEK 60

Query: 61  NIRRLNELVRHLQEQLQQCRXXXXXXXXXXXXLTERILELERQQILED 108
           NIRRLNELVRHLQEQLQQCR            L ERILELERQQILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>Glyma13g39080.1 
          Length = 108

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/108 (73%), Positives = 80/108 (74%)

Query: 1   MSRPMXXXXXXXXXXXTSQFEWKQPLVADVDSNPNVSQKQRQISKPEETVKEKIILVQEK 60
           MSRPM           TSQFEWKQ LVADVDSNPN+ QKQ QISK EETVKEKIILVQEK
Sbjct: 1   MSRPMLLVFLLIILIITSQFEWKQQLVADVDSNPNLPQKQHQISKAEETVKEKIILVQEK 60

Query: 61  NIRRLNELVRHLQEQLQQCRXXXXXXXXXXXXLTERILELERQQILED 108
           NIRRLNELVRHLQEQLQQCR            L ERILELERQQILED
Sbjct: 61  NIRRLNELVRHLQEQLQQCRGRNGTINGTVSPLAERILELERQQILED 108


>Glyma12g31220.2 
          Length = 100

 Score =  132 bits (333), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 71/89 (79%), Positives = 72/89 (80%)

Query: 20  FEWKQPLVADVDSNPNVSQKQRQISKPEETVKEKIILVQEKNIRRLNELVRHLQEQLQQC 79
           FEWKQ LVADVDSNP+VSQKQ QISK  ETVKEKIILVQEKNIRRLNELVRHLQEQLQQC
Sbjct: 12  FEWKQQLVADVDSNPSVSQKQHQISKAGETVKEKIILVQEKNIRRLNELVRHLQEQLQQC 71

Query: 80  RXXXXXXXXXXXXLTERILELERQQILED 108
           R            L ERILELERQQILED
Sbjct: 72  RGRNGTINGTVSPLAERILELERQQILED 100