Miyakogusa Predicted Gene

Lj0g3v0358289.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0358289.1 tr|D7KC86|D7KC86_ARALL Predicted protein
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_682952
PE,31.95,7e-17,ubiquitin,Ubiquitin; no description,NULL; Hect, E3
ligase catalytic domain,HECT; Ubiquitin-like,NULL,CUFF.24647.1
         (536 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g39550.1                                                       455   e-128
Glyma17g01210.1                                                       370   e-102
Glyma17g01200.1                                                       213   6e-55
Glyma17g04700.1                                                        52   1e-06

>Glyma07g39550.1 
          Length = 1282

 Score =  455 bits (1170), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/514 (46%), Positives = 331/514 (64%), Gaps = 27/514 (5%)

Query: 36  LRFFVRSMPISNSFVLHGSEEDSVKSVHERIESRTGIPIREQVLIHQGKQLRWEQNLGEC 95
           ++FFVR M   N+ V+    ED+VKS+HERI+S  GIP+ EQ LI++GKQL+WEQ L EC
Sbjct: 494 IQFFVRMMSAGNTIVMQAFPEDTVKSIHERIQSMKGIPLFEQRLIYRGKQLQWEQTLAEC 553

Query: 96  GIQNDANLQLVGRLRSGGCSEEVYAVVGQMVSLIRRVCGGELDLSVTPIIEHVMS----- 150
            IQNDANLQLVGR+RS     + + V+  MVSL+ R+C GE        ++ +M+     
Sbjct: 554 FIQNDANLQLVGRMRSTE-HPQAWQVINDMVSLVYRLCRGETVHDALKTVKGLMTSYLNM 612

Query: 151 ---IQFMAKLNAFDVLVACKAPEALIKLRLSSFSGNQDIAGSAIALFLESCRYMISKGLH 207
              I   +    F + ++  AP  L+ L +S ++GN+D A S++  FL SCR ++SK LH
Sbjct: 613 TPRIDNDSASGYFQIFMSSSAPAVLVMLYVSPYAGNKDCADSSVRHFLSSCRNILSKALH 672

Query: 208 ACCLGAVVEFCKLFTVLVGGNEPLFMSCLSCLRGTLE------GNGDRDPNRRVVLKGVF 261
             C   V+EFCKL    VG ++PL++ C S     LE      G+G  +    V+++ +F
Sbjct: 673 GQCARVVLEFCKLLR-RVGSHDPLYLFCRSTFGSLLETAGVSYGSGSDNVKGLVLIQDIF 731

Query: 262 DYVCELVGVLLREMDLSTNRPVPF--LLTRFQELVDFIIPLRNGIRGLQA-WEAVIDGEV 318
            +VCEL   LLR++DLS   P     L     +   F++PLR GI+  QA  +++   + 
Sbjct: 732 PFVCELANSLLRDLDLSIVSPSAAGPLSNDVGDFSAFLLPLRTGIKEQQAVKDSMAQDKH 791

Query: 319 PSLAKEVNHIRFMYMQLLSKMDGSLQAMEDCLANKE--EGNRGVAVAGMGWSLHISLLKR 376
             L +E+ ++  +Y+QLL+K+D  LQ M+  LA +E  EG+         WS ++S+LK 
Sbjct: 792 HKLTEEIEYLHGLYVQLLNKIDQCLQKMDQSLAGQEMMEGDNLYP----AWSHYLSILKE 847

Query: 377 LYTISKAKLYDGAEEMFWGVLIRRRNMVSQLFLWFVKRTDDHRWILEQKSATNFECRRHL 436
           LY ISK  LYDGAEE  WGVL R+R+++  L + + KRTD+H+WILE +  TNFE RRHL
Sbjct: 848 LYQISK--LYDGAEEKLWGVLTRQRSVLCLLIVRYAKRTDEHQWILEHRYVTNFESRRHL 905

Query: 437 AMMLFPHVRHVYGMGHEMLIDRSRLLTDSFEYISHASPESLRAGLLMKFQKENATGPGVV 496
           AMM+FP V+  Y   HEMLIDRS+LLT+SFEYI+ A P+SL AGL M+F+ E ATGPGV+
Sbjct: 906 AMMMFPEVKEDYEELHEMLIDRSQLLTESFEYIARAEPDSLHAGLFMEFKNEEATGPGVL 965

Query: 497 REWFLLVCREIFNPLNGLFVACPNDRKRFLPNPG 530
           REWFLLVC+ IFNP N LFVACPNDR+RF PNP 
Sbjct: 966 REWFLLVCQAIFNPQNALFVACPNDRRRFFPNPA 999



 Score =  303 bits (777), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 180/447 (40%), Positives = 262/447 (58%), Gaps = 43/447 (9%)

Query: 36  LRFFVRSMPISNSFVLHGSEEDSVKSVHERIESRTGIPIREQVLIHQGKQLRWEQNLGEC 95
           ++FFVR M   N+ V+    ED            TGIP+ EQ LI++GKQL+WEQ L EC
Sbjct: 20  IQFFVRMMSAGNTIVMQAFPED------------TGIPLFEQRLIYRGKQLQWEQTLAEC 67

Query: 96  GIQNDANLQLVGRLRSGGCSEEVYAVVGQMVSLIRRVCGGELDLSVTPIIEHVMS----- 150
            IQNDANLQLVGR+RS     + + V+  MVSL+ R+C GE        ++ +M+     
Sbjct: 68  FIQNDANLQLVGRMRSTE-HPQAWQVINDMVSLVYRLCRGETVHDALKTVKGLMTSYLNM 126

Query: 151 ---IQFMAKLNAFDVLVACKAPEALIKLRLSSFSGNQDIAGSAIALFLESCRYMISKGLH 207
              I   +    F + ++  AP  L+ L +S ++GN+D A S++  FL SCR ++SK LH
Sbjct: 127 TPRIDNDSASGYFQIFMSSSAPAVLVMLYVSPYAGNKDCADSSVRHFLSSCRNILSKALH 186

Query: 208 ACCLGAVVEFCKLFTVLVGGNEPLFMSCLSCLRGTLE------GNGDRDPNRRVVLKGVF 261
             C   V+EFCKL    VG ++PL++ C S     LE      G+G  +    V+++ +F
Sbjct: 187 GQCARVVLEFCKLLR-RVGSHDPLYLFCRSTFGSLLETAGVSYGSGSDNVKGLVLIQDIF 245

Query: 262 DYVCELVGVLLREMDLSTNRPVPF--LLTRFQELVDFIIPLRNGIRGLQA-WEAVIDGEV 318
            +VCEL   LLR++DLS   P     L     +   F++PLR GI+  QA  +++   + 
Sbjct: 246 PFVCELANSLLRDLDLSIVSPSAAGPLSNDVGDFSAFLLPLRTGIKEQQAVKDSMAQDKH 305

Query: 319 PSLAKEVNHIRFMYMQLLSKMDGSLQAMEDCLANKE--EGNRGVAVAGMGWSLHISLLKR 376
             LA+E+ ++  +Y+QLL+K+D  LQ M+  LA +E  EG+         WS ++S+LK 
Sbjct: 306 HKLAEEIEYLHGLYVQLLNKIDQCLQKMDQSLAGQEMMEGDNLYP----AWSHYLSILKE 361

Query: 377 LYTISKAKLYDGAEEMFWGVLIRRRNMVSQLFLWFVKRTDDHRWILEQKSATNFECRRHL 436
           LY ISK  LYDGAEE  WGVL R+R+++  L + + KRTD+H+WILE +  TNFE RRHL
Sbjct: 362 LYQISK--LYDGAEEKLWGVLTRQRSVLCLLIVRYAKRTDEHQWILEHRYVTNFESRRHL 419

Query: 437 AMMLFPHVRHVYGMGHEMLIDRSRLLT 463
           AMM+FP V+  Y    E L++ S +L+
Sbjct: 420 AMMMFPEVKEDY----EDLLNTSHVLS 442


>Glyma17g01210.1 
          Length = 771

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/471 (43%), Positives = 285/471 (60%), Gaps = 43/471 (9%)

Query: 89  EQNLGECGIQNDANLQLVGRLRSGGCSEEVYAVVGQMVSLIRRVCGGEL----------- 137
           +++   C IQNDANLQLVGR+RS     + + V+  MVSL+ R+C GE            
Sbjct: 32  QRDQHTCSIQNDANLQLVGRMRSTE-HPQAWQVINDMVSLVYRLCCGETVHDSLKTIKGL 90

Query: 138 ---DLSVTPIIEHVMSIQFMAKLNAFDVLVACKAPEALIKLRLSSFSGNQDIAGSAIALF 194
               L++TP I++  +  +      F + ++  AP  L+ L +S ++GN+D A S++  F
Sbjct: 91  ITSYLNMTPRIDNDSASGY------FQIFMSSSAPAVLVMLYVSPYAGNKDCADSSVRHF 144

Query: 195 LESCRYMISKGLHACCLGAVVEFCKLFTVLVGGNEPLFMSCLSCLRGTLEGNG------- 247
           L SCR  +SK LH  C   V+EFCKL    VG  +PL++ C S     LE  G       
Sbjct: 145 LSSCRTTLSKALHGQCARVVLEFCKLLR-RVGCQDPLYLYCRSAFGSLLETAGVSYAASA 203

Query: 248 DRDPNRRVVLKGVFDYVCELVGVLLREMDLSTNRPVPF--LLTRFQELVDFIIPLRNGIR 305
             +    V ++ +F +V +L   LLR++DLS   P     L     +   F++PLR GI+
Sbjct: 204 SGNVKGLVSIQDIFPFVRDLASSLLRDLDLSMVSPTAVGPLSNDVGDFSAFLMPLRTGIK 263

Query: 306 GLQAWEAVIDGEVPS----LAKEVNHIRFMYMQLLSKMDGSLQAMEDCLANKE--EGNRG 359
             QA +  +  +       LA+E+ H+  +Y+QLL+K+D  LQ M+  L  +E  EG+  
Sbjct: 264 EQQAVKNAMPQDKRHKDLLLAEEIEHLHGLYIQLLNKIDQCLQKMDQNLTGREMMEGDNL 323

Query: 360 VAVAGMGWSLHISLLKRLYTISKAKLYDGAEEMFWGVLIRRRNMVSQLFLWFVKRTDDHR 419
                  WS ++S+LK LY ISK  LYDGAEE  W +L R+R+++  L + + KRTD+H+
Sbjct: 324 YP----AWSHYLSILKELYQISK--LYDGAEEKLWSILTRQRSVLCLLIVRYAKRTDEHQ 377

Query: 420 WILEQKSATNFECRRHLAMMLFPHVRHVYGMGHEMLIDRSRLLTDSFEYISHASPESLRA 479
           WILE +  TNFE RRHLAMM+FP V+  Y   HEMLIDRS+LLT+SFEYI+ A PESL A
Sbjct: 378 WILEHRCVTNFESRRHLAMMMFPEVKEDYEELHEMLIDRSQLLTESFEYIARAEPESLHA 437

Query: 480 GLLMKFQKENATGPGVVREWFLLVCREIFNPLNGLFVACPNDRKRFLPNPG 530
           GL M+F+ E ATGPGV+REWFLLVC+ IFNP N LFVACPND++RF PNP 
Sbjct: 438 GLFMEFKNEEATGPGVLREWFLLVCQAIFNPQNALFVACPNDQRRFFPNPA 488


>Glyma17g01200.1 
          Length = 494

 Score =  213 bits (541), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 112/212 (52%), Positives = 138/212 (65%), Gaps = 21/212 (9%)

Query: 321 LAKEVNHIRFMYMQLLSKMDGSLQAMEDCLANKE--EGNRGVAVAGMGWSLHISLLKRLY 378
           LA E+ ++  + +QLL K D  LQ M+  LA +E  EG+          S  +S+LK LY
Sbjct: 99  LAGEIQYLHGLSIQLLDKTDQCLQKMDQSLAGREMMEGDNLYPAC----SHCLSILKELY 154

Query: 379 TISKAKLYDGAEEMFWGVLIRRRNMVSQLFLWFVKRTDDHRWILEQKSATNFECRRHLAM 438
            ISK  LYDGAEE  WG               + KRTD+H+WIL+++  TNFE RRHLAM
Sbjct: 155 QISK--LYDGAEEKLWG-------------FRYAKRTDEHQWILKRRCVTNFESRRHLAM 199

Query: 439 MLFPHVRHVYGMGHEMLIDRSRLLTDSFEYISHASPESLRAGLLMKFQKENATGPGVVRE 498
           M+FP V+  Y    +MLIDRS+LL +SFE I+ A PESL AGL MKFQ E  TGPGV+RE
Sbjct: 200 MIFPEVKEDYKELRKMLIDRSQLLAESFECIALAEPESLHAGLFMKFQNEEPTGPGVLRE 259

Query: 499 WFLLVCREIFNPLNGLFVACPNDRKRFLPNPG 530
           WFLLVC+ IFNP N LFVACPND++RF P P 
Sbjct: 260 WFLLVCQAIFNPQNALFVACPNDQRRFFPYPA 291


>Glyma17g04700.1 
          Length = 151

 Score = 52.4 bits (124), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 36  LRFFVRSMPISNSFVLHGSEEDSVKSVHERIESRTGIPIREQVLIHQGKQLRWEQNLGEC 95
           ++ FV+++    +  L     DS+++V  +IE + GIP  +Q LI  GKQL   + L + 
Sbjct: 1   MQIFVKTL-TGKTITLEVESSDSIENVKAKIEEKEGIPPDQQRLIFAGKQLEDGRTLEDY 59

Query: 96  GIQNDANLQLVGRLRSGGCSEEVYAVVGQMVSL 128
            IQ ++ L LV RLR GG    V  + G+ ++L
Sbjct: 60  EIQKESTLHLVLRLR-GGMQIFVKTLTGKTITL 91