Miyakogusa Predicted Gene

Lj0g3v0357619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357619.1 Non Chatacterized Hit- tr|I1N6P3|I1N6P3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47847
PE,59.26,0.000000000001,zf-4CXXC_R1,Zinc-finger domain of
monoamine-oxidase A repressor R1,CUFF.24609.1
         (92 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g06110.1                                                        81   2e-16
Glyma13g07530.1                                                        76   9e-15

>Glyma19g06110.1 
          Length = 636

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 15  ECRRKIQGVAPS--NLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
           +CR+K +  A S  N++NGKPC I FC  CL  RYGE A +V  L DW+CPKCR  CNCS
Sbjct: 49  QCRQKTRDFAVSCKNMKNGKPCPINFCHKCLLNRYGENAEEVQQLGDWTCPKCRNFCNCS 108

Query: 73  TCR 75
            CR
Sbjct: 109 FCR 111


>Glyma13g07530.1 
          Length = 708

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/63 (53%), Positives = 42/63 (66%), Gaps = 2/63 (3%)

Query: 15  ECRRKIQGVAPS--NLRNGKPCEIRFCRLCLSIRYGEEAPQVVLLDDWSCPKCRGKCNCS 72
           +CR+K +  A S  N++ GKPC I FC  CL  RYGE+A +V  L +W CPKCR  CNCS
Sbjct: 49  QCRQKTRDFAVSCKNMKKGKPCPINFCHKCLLNRYGEKAEKVEQLGNWMCPKCRNFCNCS 108

Query: 73  TCR 75
            CR
Sbjct: 109 FCR 111