Miyakogusa Predicted Gene

Lj0g3v0357159.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0357159.1 Non Chatacterized Hit- tr|I1JA31|I1JA31_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26807
PE,58.23,0.00000000002,NUCLEOPORIN 50,NULL,CUFF.24586.1
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g02910.1                                                       288   2e-78
Glyma01g42490.1                                                       262   1e-70
Glyma01g42490.4                                                       261   3e-70
Glyma01g42490.3                                                       178   4e-45
Glyma01g42490.2                                                        74   1e-13

>Glyma11g02910.1 
          Length = 359

 Score =  288 bits (738), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 138/181 (76%), Positives = 149/181 (82%), Gaps = 2/181 (1%)

Query: 1   MMRGSKRMAVSEPNHSDTTETAAFRNKRVMEGSLFDAHRAEPSQQPTVSTPPLDMKRAES 60
           MM+GSKR+A SEPN  DT ET   RNKR+MEGSLFD HRAEPSQQP V+ PPLDMKRAES
Sbjct: 1   MMKGSKRLAASEPNQVDTNETG-LRNKRIMEGSLFDIHRAEPSQQPIVAAPPLDMKRAES 59

Query: 61  SQQHVRALNTQFASWIQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVSWLKANATKA 120
           SQQHVRALNTQFASW+QTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVV+WLKANATKA
Sbjct: 60  SQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKA 119

Query: 121 EILAPDGGTSFAGKKFFPEATNKENKTFGEKTGSTPFSTATTFAGQKYLPEVSNKENKIF 180
           E LA D G +F+GKK  PE  NKENK FGEKTGSTP STAT F    + P + +    IF
Sbjct: 120 ENLAADAGVAFSGKKLLPEVINKENKPFGEKTGSTPVSTATNFTSS-WSPGLFSNSQGIF 178

Query: 181 G 181
           G
Sbjct: 179 G 179


>Glyma01g42490.1 
          Length = 358

 Score =  262 bits (670), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 133/180 (73%), Positives = 145/180 (80%), Gaps = 2/180 (1%)

Query: 2   MRGSKRMAVSEPNHSDTTETAAFRNKRVMEGSLFDAHRAEPSQQPTVSTPPLDMKRAESS 61
           M+GSKR+A SEPN  DT ET  FRNKR+MEGSLFD HRAEPSQQP V+ PPLDMKRAESS
Sbjct: 1   MKGSKRLAASEPNQIDTNETG-FRNKRIMEGSLFDVHRAEPSQQPIVAAPPLDMKRAESS 59

Query: 62  QQHVRALNTQFASWIQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVSWLKANATKAE 121
           QQHVRALNTQFASW+QTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVV+WLKANATKAE
Sbjct: 60  QQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKAE 119

Query: 122 ILAPDGGTSFAGKKFFPEATNKENKTFGEKTGSTPFSTATTFAGQKYLPEVSNKENKIFG 181
             A D   +F+GKK  PE    ENK+ GEKTGSTP STAT F    + P + +    IFG
Sbjct: 120 NSAADASAAFSGKKLLPEVIINENKSSGEKTGSTPVSTATNFTSS-WSPGLFSNSQGIFG 178


>Glyma01g42490.4 
          Length = 244

 Score =  261 bits (667), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 133/180 (73%), Positives = 145/180 (80%), Gaps = 2/180 (1%)

Query: 2   MRGSKRMAVSEPNHSDTTETAAFRNKRVMEGSLFDAHRAEPSQQPTVSTPPLDMKRAESS 61
           M+GSKR+A SEPN  DT ET  FRNKR+MEGSLFD HRAEPSQQP V+ PPLDMKRAESS
Sbjct: 1   MKGSKRLAASEPNQIDTNETG-FRNKRIMEGSLFDVHRAEPSQQPIVAAPPLDMKRAESS 59

Query: 62  QQHVRALNTQFASWIQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVSWLKANATKAE 121
           QQHVRALNTQFASW+QTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVV+WLKANATKAE
Sbjct: 60  QQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLKANATKAE 119

Query: 122 ILAPDGGTSFAGKKFFPEATNKENKTFGEKTGSTPFSTATTFAGQKYLPEVSNKENKIFG 181
             A D   +F+GKK  PE    ENK+ GEKTGSTP STAT F    + P + +    IFG
Sbjct: 120 NSAADASAAFSGKKLLPEVIINENKSSGEKTGSTPVSTATNFTS-SWSPGLFSNSQGIFG 178


>Glyma01g42490.3 
          Length = 306

 Score =  178 bits (451), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/127 (73%), Positives = 101/127 (79%), Gaps = 1/127 (0%)

Query: 55  MKRAESSQQHVRALNTQFASWIQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVSWLK 114
           MKRAESSQQHVRALNTQFASW+QTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVV+WLK
Sbjct: 1   MKRAESSQQHVRALNTQFASWVQTQLKNHPDELWEDGVRDYLDHASSIMEKFSDVVNWLK 60

Query: 115 ANATKAEILAPDGGTSFAGKKFFPEATNKENKTFGEKTGSTPFSTATTFAGQKYLPEVSN 174
           ANATKAE  A D   +F+GKK  PE    ENK+ GEKTGSTP STAT F    + P + +
Sbjct: 61  ANATKAENSAADASAAFSGKKLLPEVIINENKSSGEKTGSTPVSTATNFTSS-WSPGLFS 119

Query: 175 KENKIFG 181
               IFG
Sbjct: 120 NSQGIFG 126


>Glyma01g42490.2 
          Length = 258

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/79 (58%), Positives = 53/79 (67%), Gaps = 1/79 (1%)

Query: 103 MEKFSDVVSWLKANATKAEILAPDGGTSFAGKKFFPEATNKENKTFGEKTGSTPFSTATT 162
           MEKFSDVV+WLKANATKAE  A D   +F+GKK  PE    ENK+ GEKTGSTP STAT 
Sbjct: 1   MEKFSDVVNWLKANATKAENSAADASAAFSGKKLLPEVIINENKSSGEKTGSTPVSTATN 60

Query: 163 FAGQKYLPEVSNKENKIFG 181
           F    + P + +    IFG
Sbjct: 61  FT-SSWSPGLFSNSQGIFG 78