Miyakogusa Predicted Gene
- Lj0g3v0356229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0356229.1 Non Chatacterized Hit- tr|C5XFJ9|C5XFJ9_SORBI
Putative uncharacterized protein Sb03g043330
OS=Sorghu,28.35,7e-19,seg,NULL; LEA_2,Late embryogenesis abundant
protein, LEA-14,CUFF.24522.1
(247 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma18g08160.1 359 2e-99
Glyma02g47300.1 305 2e-83
Glyma14g01460.1 305 3e-83
Glyma08g13920.1 151 8e-37
Glyma05g30720.1 133 2e-31
Glyma17g32590.1 79 5e-15
Glyma09g35180.1 70 3e-12
Glyma16g17040.1 64 2e-10
Glyma01g35590.1 63 2e-10
Glyma07g01200.1 62 7e-10
Glyma15g35140.1 61 1e-09
Glyma15g07100.2 55 9e-08
Glyma19g38570.1 54 2e-07
Glyma10g39850.1 50 3e-06
>Glyma18g08160.1
Length = 258
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/245 (74%), Positives = 197/245 (80%), Gaps = 17/245 (6%)
Query: 17 QTKPLSLDQIVISKQPTNHLSLEPNSSNSAKTK--------------LSRPPALRFQRTN 62
QTK +S DQIVISK P S E ++ N TK L +PP FQRTN
Sbjct: 17 QTKQVSPDQIVISKLPIKQHSQESDAPNYVTTKSIRPPPPPPPPPPILRQPP---FQRTN 73
Query: 63 PIIWFASVLCLIFSLVLIFFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDF 122
PIIWFA+VLCLIFSL+LIFFGV TL IFLGIKPRNP FDIPNANLNA+YFDSP+YFNGDF
Sbjct: 74 PIIWFAAVLCLIFSLLLIFFGVVTLIIFLGIKPRNPYFDIPNANLNAVYFDSPEYFNGDF 133
Query: 123 TLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSLVFL 182
TL+AN TNPN KIDV FES D+ELFFSDRIIS+QSIEPFTQRRRESRL+SLHFISSLVFL
Sbjct: 134 TLVANITNPNKKIDVRFESFDVELFFSDRIISTQSIEPFTQRRRESRLESLHFISSLVFL 193
Query: 183 PKDLGVMLEKQVQSNLVNYNVRGTFKVRVTLGLIHLSYLLHSRCQIEMTSPPTGGLVARK 242
PKDLGV L+ QVQ N V YNVRGTFKVRV++G HLSY LHSRCQIEMT PPTG LVARK
Sbjct: 194 PKDLGVNLKGQVQGNRVKYNVRGTFKVRVSMGFFHLSYWLHSRCQIEMTGPPTGVLVARK 253
Query: 243 CITKR 247
CITKR
Sbjct: 254 CITKR 258
>Glyma02g47300.1
Length = 230
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/227 (64%), Positives = 184/227 (81%), Gaps = 6/227 (2%)
Query: 24 DQIVISKQPTNHLSLE---PNSSNSAKTKLSRPPALRFQRTNPIIWFASVLCLIFSLVLI 80
+++ KQP N S + PNS + + +P R QRT PIIW A+++C IFSLVLI
Sbjct: 7 EELGTPKQPRNQHSQQSGAPNSLANTRAIFGQP---RLQRTKPIIWCAAIMCFIFSLVLI 63
Query: 81 FFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLANFTNPNTKIDVSFE 140
FFG+ATL ++L +KPRNPTFDIPNA+LN +YFDSPQY NG+FTLLANF+NPN +I V FE
Sbjct: 64 FFGIATLILYLSMKPRNPTFDIPNASLNVVYFDSPQYLNGEFTLLANFSNPNRRIGVRFE 123
Query: 141 SLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSLVFLPKDLGVMLEKQVQSNLVN 200
SL+IELF+SDR++SSQ+I+PFTQR RE+RLQS++ ISSLVFLP+D+GV L++QV++N VN
Sbjct: 124 SLNIELFYSDRLVSSQTIKPFTQRPRENRLQSVNLISSLVFLPQDVGVKLQRQVENNRVN 183
Query: 201 YNVRGTFKVRVTLGLIHLSYLLHSRCQIEMTSPPTGGLVARKCITKR 247
YN RGTFKVR +GLIHLSY L+S CQIEMTSPP G LVAR+CIT R
Sbjct: 184 YNARGTFKVRFNVGLIHLSYSLYSTCQIEMTSPPAGILVARQCITNR 230
>Glyma14g01460.1
Length = 230
Score = 305 bits (781), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/227 (64%), Positives = 184/227 (81%), Gaps = 6/227 (2%)
Query: 24 DQIVISKQPTNHLSLE---PNSSNSAKTKLSRPPALRFQRTNPIIWFASVLCLIFSLVLI 80
+++ KQP N S + PNS + + +P R QRT PIIW A++LC IFSLVLI
Sbjct: 7 EELGTPKQPRNQHSQQSEAPNSLANTRAIFGQP---RLQRTKPIIWCAAILCFIFSLVLI 63
Query: 81 FFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLANFTNPNTKIDVSFE 140
FFG+ATL ++L +KPRNPTFDIPNA+LN +YFDSPQY NG+FTLLANF+NPN +I + FE
Sbjct: 64 FFGIATLILYLSMKPRNPTFDIPNASLNVVYFDSPQYLNGEFTLLANFSNPNRRIGLRFE 123
Query: 141 SLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSLVFLPKDLGVMLEKQVQSNLVN 200
SL+IELF+SDR++SSQ+I+PFTQR RE+RLQS++ ISSLVFLP+D+GV L++QV++N VN
Sbjct: 124 SLNIELFYSDRLVSSQTIKPFTQRPRETRLQSVNLISSLVFLPQDVGVKLQRQVENNRVN 183
Query: 201 YNVRGTFKVRVTLGLIHLSYLLHSRCQIEMTSPPTGGLVARKCITKR 247
YN RGTFKVR +GL+HLSY L+S CQIEMTSPP G LVAR+CIT R
Sbjct: 184 YNARGTFKVRFNIGLVHLSYSLYSTCQIEMTSPPAGILVARQCITNR 230
>Glyma08g13920.1
Length = 324
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 125/217 (57%), Gaps = 1/217 (0%)
Query: 32 PTNHLSLEPNSSNSAKTKLSRPPALRFQRTNPIIWFASVLCLIFSLVLIFFGVATLTIFL 91
P+ + EP +LS + Q++ P+ W + LC+IF L++I G+ L ++L
Sbjct: 108 PSADVPPEPRQQPHRDPRLSGIKLPKEQKSQPLTWLGACLCVIFWLIIIIGGLIVLIVYL 167
Query: 92 GIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLANFTNPNTKIDVSFESLDIELFFSDR 151
+P++P FD+ + LNA Y D N D T+LANFTNPN K+ V F S+ I L++
Sbjct: 168 VFRPQSPHFDVSSVTLNAAYLDLGYLLNADLTMLANFTNPNKKVHVDFSSVIIYLYYGST 227
Query: 152 IISSQSIEPFTQRRRESRLQSLHFISSLVFLPKDLGVMLEKQVQSNLVNYNVRGTFKVRV 211
+I++Q +EPF R +SR +H +SS V LP L KQ++ N V VRG F+ R
Sbjct: 228 LIATQYVEPFNAARLQSRFAYIHLVSSQVQLPLRESQRLVKQMEGNGVILEVRGVFRARS 287
Query: 212 TLG-LIHLSYLLHSRCQIEMTSPPTGGLVARKCITKR 247
LG ++ SY L+ RC + +T PP G L+ +KC TKR
Sbjct: 288 KLGSILRYSYNLYGRCSVMLTRPPDGILLKKKCRTKR 324
>Glyma05g30720.1
Length = 336
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
Query: 59 QRTNPIIWFASVLCLIFSLVLIFFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYF 118
Q++ P+ W + LC+IF L++I G+ L ++ +P++P FD+ + LNA Y D
Sbjct: 158 QKSQPLTWLGACLCVIFWLIIIIGGLIVLIVYFVFRPQSPHFDVSSVTLNAAYLDLGYLL 217
Query: 119 NGDFTLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISS 178
N D T+LANFTNPN K+ V F S+ I L++ +I++Q +EPF R +SR +H +SS
Sbjct: 218 NADLTMLANFTNPNKKVHVDFSSVIIYLYYGSTLIATQYVEPFYAARLQSRFAYIHMVSS 277
Query: 179 LVFLPKDLGVMLEKQVQSNLVNYNVRGTFKVRVTLG-LIHLSYLLHSRCQIEMTSPP 234
V LP L KQ++ N V VRG F+ R LG ++ SY L+ RC + +T PP
Sbjct: 278 QVQLPLRESQRLVKQMEGNGVMLEVRGVFRARSKLGTILRYSYNLYGRCSVMLTRPP 334
>Glyma17g32590.1
Length = 101
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 60/110 (54%), Gaps = 26/110 (23%)
Query: 116 QYFNGDFTLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHF 175
Q NGDF+LLA+ TNPN IDV FE D+ELFFSDRIIS+ ++ RRE R +
Sbjct: 5 QQSNGDFSLLASITNPNRNIDVRFELFDVELFFSDRIISTLHSALYSG-RREGRTGA--- 60
Query: 176 ISSLVFLPKDLGVMLEKQVQSNLVNYNVRG---TFKVRVTLGLIHLSYLL 222
Q N V Y+VRG KVRV++G HLSYLL
Sbjct: 61 -------------------QWNRVKYSVRGNIKVIKVRVSVGFFHLSYLL 91
>Glyma09g35180.1
Length = 191
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 95/192 (49%), Gaps = 9/192 (4%)
Query: 60 RTNPIIWFASVLCLIFSLVLIFFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFN 119
+T+P+IW A++LC I ++ ++ G+ ++ I PR P I NA+L+ L D
Sbjct: 2 KTHPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVMSITNAHLDLLSNDYAGLLQ 61
Query: 120 GDFTLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFI--- 176
T++ N N K +F + L + + I+ PF + S+ SL+++
Sbjct: 62 TQLTIIVVAQNGNAKAHATFSDIRFNLSYQGQRIALMRAPPFDVPKNSSK--SLNYVVRA 119
Query: 177 SSLVFLPKDLGVMLEKQVQSNLVNYNVRGTFKVRVTLG-LIHLSYLLHSRCQIEMTSPPT 235
+S+ P+ + +++ + +++ ++++G+ + R +G L + + + CQ++ P
Sbjct: 120 ASIPLTPQQME-EVDESWKRDVIGFDLKGSARTRWRVGPLGSVKFWCNLECQLKF-HPSN 177
Query: 236 GGLVAR-KCITK 246
G + +C +K
Sbjct: 178 GSYIHHSRCTSK 189
>Glyma16g17040.1
Length = 194
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 60 RTNPIIWFASVLCLIFSLVLIFFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFN 119
RTNP++W +++C I ++ ++ G+ ++ I PR P + NA+L+ L D
Sbjct: 6 RTNPLVWLVAIICTIIAVAVVVVGIVVFIGYIVIHPRVPVISVTNAHLDLLRNDYAGLLQ 65
Query: 120 GDFTLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSL 179
T++ N N K SF ++ + + + I+ +PF + S+ S SS
Sbjct: 66 TQLTIVVTAKNGNAKAHASFSAITFNISYQGQDIAVLVADPFEVPKNSSKDLSYVVQSSS 125
Query: 180 VFLPKDLGVMLEKQVQSNLVNYNVRGTFKVRVTLG-LIHLSYLLHSRCQIEMTSPPTGGL 238
+ L D + + N + ++ +G + + +G L + +L H C ++ P G
Sbjct: 126 IPLTPDQMEEVNDAWKRNEIEFDFKGAARTQWRVGPLGSVKFLCHLDCDLKF-RPVNGTY 184
Query: 239 VARKCITK 246
+ +C +K
Sbjct: 185 IPSRCTSK 192
>Glyma01g35590.1
Length = 198
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 18/186 (9%)
Query: 62 NPIIWFASVLCLIFSLVLIFFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGD 121
+P+IW A++LC I ++ ++ G+ ++ I PR P I NA+L+ L D
Sbjct: 11 HPLIWLAAILCTIIAIGVVIAGIVVFVGYMVIHPRIPVISITNAHLDLLSNDYTGLLQTQ 70
Query: 122 FTLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSLVF 181
T++ N N K +F + L + + I+ PF + S+ + S+ +
Sbjct: 71 LTIIVVAQNGNAKAHATFSDIRFNLSYQGQGIAVMLAPPFDVAKNSSKPLNYVVRSASIP 130
Query: 182 LPKDLGVMLEKQVQSNLVNYNVRGTFKVRVTLGLI------------------HLSYLLH 223
L + +++ + +++ ++++G+ + R +G + + SY+ H
Sbjct: 131 LTPEQMEEVDESWKRDVIGFDLKGSARTRWRVGPLGSVKFWCNLECQLRFRPSNGSYIHH 190
Query: 224 SRCQIE 229
SRC E
Sbjct: 191 SRCTSE 196
>Glyma07g01200.1
Length = 254
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 83 GVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLANFTNPNTKIDVSFESL 142
G A ++ +P+ PTF + + L++ +P N F L + TNPN KI S++
Sbjct: 71 GAAGTVLYFLYRPQRPTFSVTSLKLSSFNLTTPSTINAKFDLTLSTTNPNDKIIFSYDPT 130
Query: 143 DIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSLVFLPKDLGVMLEKQV--QSNLVN 200
+ L + D ++S +I F R+R + + + S+ + D + L++ + +S LV
Sbjct: 131 SVSLLYGDTAVASTTIPSFLHRQRNTTVLQAYVTSTEEVVDSDAAMELKRSMKRKSQLVA 190
Query: 201 YNVRGTFKVRVTLGLIH 217
V KV +G+
Sbjct: 191 LKVELETKVEAQMGVFQ 207
>Glyma15g35140.1
Length = 88
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 192 KQVQSNLVNYNVRGTFKVRVTLGLIHLSYLLHSRCQIEMTSPPTG 236
+QV++N V YN RGTFKVR GL+HLSY L+S CQIEM + P G
Sbjct: 42 RQVENNRVIYNARGTFKVRFNNGLVHLSYSLYSTCQIEMPTHPAG 86
>Glyma15g07100.2
Length = 203
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 40 PNSSNSAKTKLSRPPALRFQRTNPIIWFASVLCLIFSLVLIFFGVATLTIFLGIKPRNPT 99
P+ SNS T ++P +R+N + + A + ++I G+A + I+L +KP+
Sbjct: 5 PSQSNS--TAANKP-----KRSNLLHYIA----MFIVALIILVGIAVIIIWLVLKPKRLE 53
Query: 100 FDIPNANLNALYFDSPQYFNGDFTLLANFTNPNTKIDVSFESLDIELFFSDRIISSQSIE 159
+ + NA ++ + +F NPN++I + ++++++ + + D+ +++ +++
Sbjct: 54 YSVENAAIHNFNLTDANHLYANFDFTIRSYNPNSRISIYYDTVEVSVRYEDQTLATNAVQ 113
Query: 160 PFTQRRRE-SRLQSLHFISSLVF---LPKDLGVMLEKQVQSNLVNYNVRGTFKVRV 211
PF Q + +RL S+ +PKDL LE+ ++ VR + +V
Sbjct: 114 PFFQSHKNVTRLHVALTAQSVALYESVPKDL--RLERSSGDIELDVWVRARIRFKV 167
>Glyma19g38570.1
Length = 216
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 5/183 (2%)
Query: 70 VLCLIFSLVL---IFFGVATLTIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLA 126
+ LIF L+L I G+A +L ++P F + +A L + + + D L
Sbjct: 34 LFSLIFKLILTVIIIVGIAGFVFWLIVRPNVVKFHVTDATLTQFNYTANNTLHYDLALNI 93
Query: 127 NFTNPNTKIDVSFESLDIELFFSDRIISSQSIEPFTQRRRESRLQSLHFISSLVF-LPKD 185
NPN ++ + ++ ++ F D SQ EPF Q + +++ + F V L +
Sbjct: 94 TVRNPNKRLGIYYDRIEARAMFHDARFDSQFPEPFYQGHKSTKVLNPVFKGQQVVPLNAE 153
Query: 186 LGVMLEKQVQSNLVNYNVRGTFKVRVTLGLIHLSYLL-HSRCQIEMTSPPTGGLVARKCI 244
L+K+ + + +V+ +VR LG++ L C + + + KC
Sbjct: 154 QSAELKKENATGVYEIDVKMYLRVRFKLGVLKTKTLKPKVSCDLRVPFKGSAAFETTKCH 213
Query: 245 TKR 247
R
Sbjct: 214 WDR 216
>Glyma10g39850.1
Length = 227
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 32 PTNHLSLEPNSSNSAKTKLSRPPALRF--QRTNPII--WFASVLCLIFSLVLIFFGVATL 87
P +H+ SN KL+R +R+ R + + + ++C F +L G+ T
Sbjct: 8 PVHHV----QGSNPKPVKLNRHHTMRYYVHRVHESLTTRVSKMICATFLGLLFIVGLITF 63
Query: 88 TIFLGIKPRNPTFDIPNANLNALYFDSPQYFNGDFTLLANFTNPNTKIDVSFESLDIELF 147
++L ++P P F I NL L +S + N T + N N I V +ES+D ++
Sbjct: 64 ILWLSLRPHRPRFHIQEFNLPGLTQNS-GFENAVITFKVSARNSNQNIGVYYESMDGAVY 122
Query: 148 FSDRIISSQS-IEPFTQR 164
+ D+ I S+ + PF Q+
Sbjct: 123 YRDQKIGSKPLLYPFYQQ 140