Miyakogusa Predicted Gene

Lj0g3v0356019.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0356019.2 Non Chatacterized Hit- tr|J3LSI4|J3LSI4_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB03G4,52.53,5e-17,coiled-coil,NULL; seg,NULL,CUFF.24538.2
         (123 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g40210.1                                                       170   3e-43

>Glyma10g40210.1 
          Length = 136

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 91/126 (72%), Positives = 97/126 (76%), Gaps = 3/126 (2%)

Query: 1   MALTVTVNKYASSNLQAVHRTQEK-AGNQTTPTLSTNGEVGRRGLILSTAIATTQVPE-- 57
           MALTVTVNKYASSNLQAV RTQ K A  +TTPTLSTN E+GRRGL+LST IATTQVPE  
Sbjct: 11  MALTVTVNKYASSNLQAVPRTQGKVATKKTTPTLSTNVEMGRRGLVLSTVIATTQVPEPD 70

Query: 58  SRTQLLXXXXXXXXXXXXXXXXXRLDSYYKRNYKDYFELMEGTLKGKDGELSETEKGIRD 117
           SRTQLL                 RL+SYYKRNYKDYFELMEGTLK KDG+LS+TEKGI D
Sbjct: 71  SRTQLLKKYQKKSEENKEKNDKERLESYYKRNYKDYFELMEGTLKAKDGKLSDTEKGILD 130

Query: 118 WLQSNK 123
           WLQ NK
Sbjct: 131 WLQKNK 136