Miyakogusa Predicted Gene

Lj0g3v0355929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0355929.1 tr|I3T386|I3T386_LOTJA 60S ribosomal protein L18a
OS=Lotus japonicus PE=2 SV=1,100,0,Ribosomal_L18ae,Ribosomal protein
L18a/LX; 60S RIBOSOMAL PROTEIN L18A,NULL; 60S RIBOSOMAL PROTEIN
L1,NODE_49588_length_757_cov_102.610306.path1.1
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g13270.1                                                       355   1e-98
Glyma14g03380.1                                                       354   2e-98
Glyma15g10220.1                                                       353   6e-98
Glyma02g45430.1                                                       353   6e-98
Glyma14g03380.2                                                       301   2e-82
Glyma19g21610.1                                                       206   1e-53
Glyma08g42060.1                                                       179   2e-45
Glyma13g28830.1                                                       130   9e-31
Glyma17g31430.1                                                       114   8e-26
Glyma03g06550.1                                                       109   2e-24
Glyma17g16910.1                                                        90   1e-18
Glyma05g21710.1                                                        66   2e-11
Glyma08g36110.1                                                        49   2e-06

>Glyma18g13270.1 
          Length = 178

 Score =  355 bits (912), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 167/178 (93%), Positives = 175/178 (98%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MV F+ HQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+
Sbjct: 1   MVTFRVHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINE+FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS
Sbjct: 61  LAINEVFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ AKLCKRESTKQFHNSKIKFPLV+KK+RPPTRKLKTTYKA++PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKATKPNLFM 178


>Glyma14g03380.1 
          Length = 178

 Score =  354 bits (909), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/178 (94%), Positives = 173/178 (97%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVA +FHQYQVVGRALPTE+D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVAMRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMY EMASRHRVR 
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYTEMASRHRVRH 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ AKLCKRESTKQFHNSKIKFPLV+KKIRPPTRKLKTTYKASRPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKIRPPTRKLKTTYKASRPNLFM 178


>Glyma15g10220.1 
          Length = 178

 Score =  353 bits (905), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 168/178 (94%), Positives = 172/178 (96%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MV F+FHQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVE MYNEMASRHRVRS
Sbjct: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYNEMASRHRVRS 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ AKLCKRESTKQFHNSKIKFPLVYKK+RPPTRKLKTTYKA +PNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVYKKVRPPTRKLKTTYKAKKPNLFM 178


>Glyma02g45430.1 
          Length = 178

 Score =  353 bits (905), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 167/178 (93%), Positives = 173/178 (97%)

Query: 1   MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
           MVA +FHQYQVVGRALPTE+D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1   MVAMRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61  LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRS 120
           LAINEIFE+NPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMY EMASRHRVR 
Sbjct: 61  LAINEIFERNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYTEMASRHRVRH 120

Query: 121 PCIQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           PCIQIIKTAT+ AKLCKRESTKQFHNSKIKFPLV+KK+RPPTRKLKTTYKASRPNLFM
Sbjct: 121 PCIQIIKTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 178


>Glyma14g03380.2 
          Length = 150

 Score =  301 bits (772), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 145/150 (96%), Positives = 147/150 (98%)

Query: 29  MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTG 88
           MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTG
Sbjct: 1   MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTG 60

Query: 89  YHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPCIQIIKTATVEAKLCKRESTKQFHNSK 148
           YHNMYKEYRDTTLNGAVEHMY EMASRHRVR PCIQIIKTAT+ AKLCKRESTKQFHNSK
Sbjct: 61  YHNMYKEYRDTTLNGAVEHMYTEMASRHRVRHPCIQIIKTATIPAKLCKRESTKQFHNSK 120

Query: 149 IKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           IKFPLV+KKIRPPTRKLKTTYKASRPNLFM
Sbjct: 121 IKFPLVFKKIRPPTRKLKTTYKASRPNLFM 150


>Glyma19g21610.1 
          Length = 114

 Score =  206 bits (523), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 97/113 (85%), Positives = 103/113 (91%)

Query: 63  INEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEMASRHRVRSPC 122
           I + FEKNPTKIKNYGIWLRYQSRTGY +MYKEYRDTTLNGA+  MYNEMASRHRVRSPC
Sbjct: 1   IFQTFEKNPTKIKNYGIWLRYQSRTGYDSMYKEYRDTTLNGAIRVMYNEMASRHRVRSPC 60

Query: 123 IQIIKTATVEAKLCKRESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPN 175
           IQIIK  T+ AKLCKRESTKQFHNSKI FPLVYKK+RPPTRKLKTTYKA +PN
Sbjct: 61  IQIIKIVTIPAKLCKRESTKQFHNSKINFPLVYKKVRPPTRKLKTTYKAKKPN 113


>Glyma08g42060.1 
          Length = 129

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 92/129 (71%), Positives = 94/129 (72%), Gaps = 30/129 (23%)

Query: 6   FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINE 65
           FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+LAINE
Sbjct: 1   FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINE 60

Query: 66  ------------------------------IFEKNPTKIKNYGIWLRYQSRTGYHNMYKE 95
                                            K+PTKIKNYGI LRYQSRTGYHNMYKE
Sbjct: 61  PYFDMDRSTRRQIFSCVLLQHCRLQLQIVIFLRKSPTKIKNYGISLRYQSRTGYHNMYKE 120

Query: 96  YRDTTLNGA 104
           Y DTTLNGA
Sbjct: 121 YHDTTLNGA 129


>Glyma13g28830.1 
          Length = 93

 Score =  130 bits (326), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 66/72 (91%), Gaps = 3/72 (4%)

Query: 1  MVAFKFHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60
          MV F+FHQYQVVGRALPTE D HPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV
Sbjct: 1  MVTFRFHQYQVVGRALPTEADQHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQV 60

Query: 61 LAINE---IFEK 69
          LAINE   +F+K
Sbjct: 61 LAINEFPLVFQK 72



 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/29 (79%), Positives = 28/29 (96%)

Query: 150 KFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
           +FPLV++K+RPPTRKLKTTYKA +PNLFM
Sbjct: 65  EFPLVFQKVRPPTRKLKTTYKAKKPNLFM 93


>Glyma17g31430.1 
          Length = 151

 Score =  114 bits (284), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 54/61 (88%), Positives = 55/61 (90%)

Query: 6  FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINE 65
          FHQ QVVGRALPTE D HPKIYRMKLWATNEV AKSKFWYFLRKLKKVKKSN QVLAI E
Sbjct: 1  FHQCQVVGRALPTEADQHPKIYRMKLWATNEVCAKSKFWYFLRKLKKVKKSNDQVLAIKE 60

Query: 66 I 66
          +
Sbjct: 61 V 61


>Glyma03g06550.1 
          Length = 99

 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/97 (58%), Positives = 69/97 (71%), Gaps = 2/97 (2%)

Query: 53  VKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEHMYNEM 112
            + S G+V  IN I E++  K     +   +Q +  Y+ M   + DTTLNGAVE MY+EM
Sbjct: 5   AQASYGEV--INNIGEQSREKTCMGQLRGSHQVQATYNEMASRHSDTTLNGAVEAMYSEM 62

Query: 113 ASRHRVRSPCIQIIKTATVEAKLCKRESTKQFHNSKI 149
           ASRHRVRSPCIQIIKT T+ AKLCK+ESTKQFHNSKI
Sbjct: 63  ASRHRVRSPCIQIIKTTTIPAKLCKKESTKQFHNSKI 99


>Glyma17g16910.1 
          Length = 64

 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/60 (86%), Positives = 55/60 (91%)

Query: 6  FHQYQVVGRALPTETDVHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINE 65
          FHQYQVVGRALPT+ D HPKIY+MKLW+TNEV AKSKFWYFLRKLKKVKK N QVLAINE
Sbjct: 5  FHQYQVVGRALPTQPDQHPKIYQMKLWSTNEVFAKSKFWYFLRKLKKVKKRNNQVLAINE 64


>Glyma05g21710.1 
          Length = 81

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/40 (77%), Positives = 33/40 (82%)

Query: 139 ESTKQFHNSKIKFPLVYKKIRPPTRKLKTTYKASRPNLFM 178
             TKQFHNSKIKFPLVYKK+RP TRKL T YKA +PNL M
Sbjct: 42  RGTKQFHNSKIKFPLVYKKVRPATRKLNTAYKAKKPNLCM 81


>Glyma08g36110.1 
          Length = 26

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/26 (80%), Positives = 22/26 (84%)

Query: 11 VVGRALPTETDVHPKIYRMKLWATNE 36
          VVGRALPTE D HPKIYRM  WATN+
Sbjct: 1  VVGRALPTEADQHPKIYRMMFWATNK 26