Miyakogusa Predicted Gene

Lj0g3v0355919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0355919.1 Non Chatacterized Hit- tr|A9P102|A9P102_PICSI
Putative uncharacterized protein OS=Picea sitchensis P,43.64,5e-17,
,CUFF.24496.1
         (144 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g37670.1                                                       178   1e-45
Glyma17g02990.1                                                       160   3e-40
Glyma16g02720.1                                                        52   2e-07

>Glyma07g37670.1 
          Length = 532

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/118 (84%), Positives = 105/118 (88%), Gaps = 2/118 (1%)

Query: 28  VILMQRGSNGEGGKGLYSVKFTSKEQGLSDG-SYTVAFEDHADANNFCFLLDSFFEDLGD 86
           VILMQR S  EG +GLYS+KFTSKEQ  SD  SYTVAFEDHADANNFCFLL SFFEDLG 
Sbjct: 413 VILMQRDSE-EGSEGLYSLKFTSKEQEQSDDDSYTVAFEDHADANNFCFLLKSFFEDLGS 471

Query: 87  FSANAVPMSIQELSEEIISRAKKVIVVKKRQLQLYAGQLLTDVEMALCSIIEQDQNAP 144
           FSA+AVPMSIQEL+EEIISRAKKV+VVKKRQLQLYAGQ L DVEMAL SIIEQDQNAP
Sbjct: 472 FSADAVPMSIQELNEEIISRAKKVVVVKKRQLQLYAGQPLADVEMALRSIIEQDQNAP 529


>Glyma17g02990.1 
          Length = 447

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/119 (80%), Positives = 100/119 (84%), Gaps = 3/119 (2%)

Query: 28  VILMQRGSNGEGGKGLY-SVKFTSKEQGLSDG-SYTVAFEDHADANNFCFLLDSFFEDLG 85
           VILMQR S  EG +GLY  +KFTSKEQ  SD  SYTVAFEDHADANNFCFLL SFFEDLG
Sbjct: 330 VILMQRDSE-EGLEGLYYGLKFTSKEQEQSDDDSYTVAFEDHADANNFCFLLKSFFEDLG 388

Query: 86  DFSANAVPMSIQELSEEIISRAKKVIVVKKRQLQLYAGQLLTDVEMALCSIIEQDQNAP 144
            FSA AVPM IQEL+EEIISRAKKV+VVKKRQLQLYAGQ L DVEM L SIIEQDQ AP
Sbjct: 389 SFSAYAVPMPIQELNEEIISRAKKVVVVKKRQLQLYAGQPLADVEMHLRSIIEQDQIAP 447


>Glyma16g02720.1 
          Length = 1190

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 50/101 (49%)

Query: 36   NGEGGKGLYSVKFTSKEQGLSDGSYTVAFEDHADANNFCFLLDSFFEDLGDFSANAVPMS 95
            NGE   GLYS++  S  +      + +AF+D  D  N C+++ +  E LG+  A  V   
Sbjct: 1045 NGEQKVGLYSLEMASDLELEPKPYHVIAFQDPNDCKNLCYIIQAHMEMLGNGHAFVVARP 1104

Query: 96   IQELSEEIISRAKKVIVVKKRQLQLYAGQLLTDVEMALCSI 136
             ++   E  +    V V+KK +LQL   Q L +VE  +  I
Sbjct: 1105 PKDAFREAKANGFGVTVIKKGELQLNIDQPLEEVEEQISEI 1145