Miyakogusa Predicted Gene

Lj0g3v0355169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0355169.1 Non Chatacterized Hit- tr|B9RLT3|B9RLT3_RICCO DNA
binding protein, putative OS=Ricinus communis
GN=R,58.02,2e-16,seg,NULL,CUFF.24464.1
         (149 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g15930.1                                                       152   2e-37
Glyma11g17120.1                                                       114   3e-26
Glyma03g04000.1                                                        69   1e-12
Glyma01g32890.1                                                        49   2e-06

>Glyma01g15930.1 
          Length = 458

 Score =  152 bits (383), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/151 (58%), Positives = 100/151 (66%), Gaps = 2/151 (1%)

Query: 1   MLDEVIEYLKQLQAQVQMINRFNXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXX 60
           MLDEVIEYLKQLQAQ+QMINR N                 +                   
Sbjct: 308 MLDEVIEYLKQLQAQLQMINRINMSSMMLPLTMQQQLQMSMMSPMGMGLGMGMGMGMGMG 367

Query: 61  XXXNTMNRANMPGMPPVLHPSAFMPMASWDAATAATGG-DRLQGPPATMMPDPMSTFFGC 119
              N+MNRA++PG+PPVLHPSAFMPMA+   A AA GG DRLQG PA +MPDP+STFFGC
Sbjct: 368 MDMNSMNRAHIPGIPPVLHPSAFMPMAASWDAAAAAGGGDRLQGTPANVMPDPLSTFFGC 427

Query: 120 QSQPMNMEAYSRLAAMYQQLHQ-PPASGPKN 149
           QSQPM ++AYSRLAAMYQQLHQ PPASG KN
Sbjct: 428 QSQPMTIDAYSRLAAMYQQLHQPPPASGSKN 458


>Glyma11g17120.1 
          Length = 458

 Score =  114 bits (285), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 80/136 (58%), Gaps = 4/136 (2%)

Query: 1   MLDEVIEYLKQLQAQVQMINRFNXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXX 60
           MLDEVIEYLKQLQAQVQM+NR N                 +                   
Sbjct: 314 MLDEVIEYLKQLQAQVQMMNRINMSSMMLPLTMQQQLQMSMMSPMGMGLGMGMGMGMGMG 373

Query: 61  XXXNTMNRANMPGMPPVLHPSAFMPMASWDAATAATGG---DRLQGPPATMMPDPMSTFF 117
              N+MNRAN+PG+PPVLHPSAFMPMA+   A  A      DRLQG PA++MPDP+ST F
Sbjct: 374 MDMNSMNRANIPGIPPVLHPSAFMPMAASWDAAVAAAAGGGDRLQGTPASVMPDPLSTIF 433

Query: 118 GCQSQP-MNMEAYSRL 132
           GCQSQ  ++ME YS+L
Sbjct: 434 GCQSQLYISMEEYSKL 449


>Glyma03g04000.1 
          Length = 397

 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 64/149 (42%), Gaps = 23/149 (15%)

Query: 1   MLDEVIEYLKQLQAQVQMINRFNXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXXXX 60
           MLDEVI+Y+KQLQAQVQM+N                                        
Sbjct: 272 MLDEVIQYMKQLQAQVQMMNWMKMYTSMMLPITMQQQQQQQQLKMSMMMAQMGMGMGMSK 331

Query: 61  XXXNTMNRANMPGMPPVLHPSAFMPMASWDAATAATGGDRLQGPPATMMPDPMSTFFGCQ 120
                MN  N+PG PP+L   +FMPMA          GD+LQG P               
Sbjct: 332 DMVMNMNSMNIPGFPPMLPFPSFMPMAPC--------GDQLQGTP--------------- 368

Query: 121 SQPMNMEAYSRLAAMYQQLHQPPASGPKN 149
            + + M+AYS +A++YQQL  PPAS  KN
Sbjct: 369 EKSVTMDAYSTMASLYQQLFHPPASSSKN 397


>Glyma01g32890.1 
          Length = 147

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 26/152 (17%)

Query: 1   MLDEVIEYLKQLQAQVQMIN--RFNXXXXXXXXXXXXXXXXXIXXXXXXXXXXXXXXXXX 58
           MLDEVI+Y+KQLQAQVQM+N  +                   +                 
Sbjct: 19  MLDEVIQYMKQLQAQVQMMNWMKMYTTMMLPITMQQQQQQLKMSMMMAQMGMGMGMGMGM 78

Query: 59  XXXXXNTMNRANMPGMPPVLHPSAFMPMASWDAATAATGGDRLQGPPATMMPDPMSTFFG 118
                  MN  N+PG+PP+L                 + GD+LQG P             
Sbjct: 79  NKDMVMNMNSMNIPGIPPMLPFPP--------FMPMVSCGDQLQGTP------------- 117

Query: 119 CQSQPMNMEAYSRLAAMY-QQLHQPPASGPKN 149
              + + M+AYS++A++Y QQL  PPAS  KN
Sbjct: 118 --EKSVTMDAYSKMASLYDQQLFHPPASSSKN 147