Miyakogusa Predicted Gene

Lj0g3v0354089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0354089.1 tr|G7KD70|G7KD70_MEDTR Yellow stripe-like protein
2.8 OS=Medicago truncatula GN=MTR_5g091600 PE=4
SV,84.81,9e-31,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
OPT,Oligopeptide transporter OPT superfamily; seg,N,CUFF.24375.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g31870.1                                                       104   3e-23
Glyma18g05420.1                                                        91   2e-19
Glyma16g33840.1                                                        86   8e-18
Glyma09g29410.1                                                        86   9e-18
Glyma19g26500.1                                                        75   2e-14
Glyma16g05850.1                                                        75   2e-14
Glyma20g00700.1                                                        75   2e-14
Glyma20g00690.1                                                        74   3e-14
Glyma06g13820.1                                                        71   2e-13
Glyma04g41020.1                                                        71   2e-13
Glyma17g26520.1                                                        67   5e-12
Glyma20g35980.1                                                        64   3e-11
Glyma10g31610.1                                                        64   3e-11
Glyma13g10410.1                                                        60   5e-10
Glyma20g16600.1                                                        60   5e-10
Glyma09g41800.1                                                        50   6e-07

>Glyma11g31870.1 
          Length = 639

 Score =  104 bits (259), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 54/79 (68%), Positives = 58/79 (73%), Gaps = 1/79 (1%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS +IAKQS EA TA D+K PGLGWM+A                RKIMIVDFKLTYPSGT
Sbjct: 88  MSSDIAKQSPEA-TAQDIKDPGLGWMIAFAFVVSFLGLFSLVPLRKIMIVDFKLTYPSGT 146

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHTTEGA+LAK
Sbjct: 147 ATAHLINSFHTTEGAKLAK 165


>Glyma18g05420.1 
          Length = 168

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 49/79 (62%), Positives = 52/79 (65%), Gaps = 5/79 (6%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS EIAK  S   TA D+K PGLGWM+A                  IMIVDFKLTY SGT
Sbjct: 50  MSSEIAKAYSLVFTAQDIKDPGLGWMIAFAFVVSFLGLFSL-----IMIVDFKLTYHSGT 104

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHTTEGA+LAK
Sbjct: 105 ATAHLINSFHTTEGAKLAK 123


>Glyma16g33840.1 
          Length = 702

 Score = 85.9 bits (211), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 3/79 (3%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS EIAKQSS+ +   D   P LGW++                 RKIM++DFKLTYPSGT
Sbjct: 152 MSEEIAKQSSDPSHFKD---PKLGWIIGFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGT 208

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT +GA+LAK
Sbjct: 209 ATAHLINSFHTPQGAKLAK 227


>Glyma09g29410.1 
          Length = 703

 Score = 85.9 bits (211), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/79 (55%), Positives = 51/79 (64%), Gaps = 3/79 (3%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MS EIAKQSS+     D   P LGW++                 RKIM++DFKLTYPSGT
Sbjct: 153 MSEEIAKQSSDTGHFKD---PKLGWIIGFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGT 209

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATAHLINSFHT +GA+LAK
Sbjct: 210 ATAHLINSFHTPQGAKLAK 228


>Glyma19g26500.1 
          Length = 674

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/68 (52%), Positives = 43/68 (63%)

Query: 12  ANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSFHT 71
            N A D+K PGLGWM+                 RK+M++D+KLTYPSGTATA LINSFHT
Sbjct: 145 GNRAEDVKDPGLGWMMGFMFVVSFLGLFSLVPLRKVMVMDYKLTYPSGTATAMLINSFHT 204

Query: 72  TEGARLAK 79
             GA LA+
Sbjct: 205 KTGAELAE 212


>Glyma16g05850.1 
          Length = 674

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/67 (53%), Positives = 42/67 (62%)

Query: 12  ANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATAHLINSFHT 71
            N A D+K PGLGWM+                 RK+M++D+KLTYPSGTATA LINSFHT
Sbjct: 145 GNRAEDVKNPGLGWMMGFMFVVSFLGLFSLVPLRKVMVLDYKLTYPSGTATAMLINSFHT 204

Query: 72  TEGARLA 78
             GA LA
Sbjct: 205 KTGAELA 211


>Glyma20g00700.1 
          Length = 676

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 46/79 (58%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MSP IA Q    NT ++ K   LGWM                  RK+MI+ +KLTYPSGT
Sbjct: 118 MSPYIASQVDGGNTPINTKTISLGWMFGFLFVVSFVGLFSIVPLRKVMILKYKLTYPSGT 177

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATA L+NS HT +GA+LAK
Sbjct: 178 ATALLVNSLHTPKGAKLAK 196


>Glyma20g00690.1 
          Length = 676

 Score = 74.3 bits (181), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/79 (48%), Positives = 46/79 (58%)

Query: 1   MSPEIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGT 60
           MSP IA Q    NT ++ K   LGWM                  RK+MI+ +KLTYPSGT
Sbjct: 118 MSPYIASQVDGGNTPINTKTISLGWMFGFLFVVSFVGLFSIVPLRKVMILKYKLTYPSGT 177

Query: 61  ATAHLINSFHTTEGARLAK 79
           ATA L+NS HT +GA+LAK
Sbjct: 178 ATALLVNSLHTPKGAKLAK 196


>Glyma06g13820.1 
          Length = 676

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 43/76 (56%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E A   +E N     K PG+GWM A                RKIMI+D+KLTYPSGTATA
Sbjct: 143 EQAGVGTEGNNPGSTKEPGIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATA 202

Query: 64  HLINSFHTTEGARLAK 79
            LIN FHT +G  +AK
Sbjct: 203 VLINGFHTPKGDVMAK 218


>Glyma04g41020.1 
          Length = 676

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/76 (48%), Positives = 43/76 (56%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E A   +E N     K PG+GWM A                RKIMI+D+KLTYPSGTATA
Sbjct: 143 EQAGVGTEGNNPGSTKEPGIGWMTAFLFVTSFVGLLALVPIRKIMIIDYKLTYPSGTATA 202

Query: 64  HLINSFHTTEGARLAK 79
            LIN FHT +G  +AK
Sbjct: 203 VLINGFHTPKGDVMAK 218


>Glyma17g26520.1 
          Length = 608

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E A   ++ NT +  K PG+GWM A                RK+MI+D+KLTYP+GTATA
Sbjct: 79  EQAGVDTKGNTPI-TKEPGIGWMTAFLFVTYFVGLSALIPLRKMMIIDYKLTYPTGTATA 137

Query: 64  HLINSFHTTEGARLAK 79
            LIN FHT +G  +AK
Sbjct: 138 VLINGFHTPKGDEMAK 153


>Glyma20g35980.1 
          Length = 671

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E++   +E N    +K PG GWM                  RKIMIVD KLTYPSG ATA
Sbjct: 142 ELSGVENEGNNPGAIKEPGFGWMTGFLFVVCFVGLFVLIPLRKIMIVDLKLTYPSGLATA 201

Query: 64  HLINSFHTTEGARLAK 79
            LIN FH T+G ++AK
Sbjct: 202 VLINGFH-TQGDKMAK 216


>Glyma10g31610.1 
          Length = 704

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/76 (46%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E++   +E N    +K PG GWM                  RKIMIVD KLTYPSG ATA
Sbjct: 174 ELSGVGNEGNNPGAIKEPGFGWMTGFLFVVCFVGLFVLIPLRKIMIVDLKLTYPSGLATA 233

Query: 64  HLINSFHTTEGARLAK 79
            LIN FH T+G ++AK
Sbjct: 234 VLINGFH-TQGDKMAK 248


>Glyma13g10410.1 
          Length = 669

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E++   +E N    ++ PG  WM A                RKIMIVD KLT+PSG ATA
Sbjct: 141 ELSGVGAEGNNPNTVRDPGYAWMTAFLFVVCFVGLFILIPLRKIMIVDLKLTFPSGLATA 200

Query: 64  HLINSFHTTEGARLAK 79
            LIN FH T+G ++AK
Sbjct: 201 VLINGFH-TQGDKMAK 215


>Glyma20g16600.1 
          Length = 633

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 1/76 (1%)

Query: 4   EIAKQSSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDFKLTYPSGTATA 63
           E++   +E N    ++ PG  WM                  RKIMIVD KLT+PSG ATA
Sbjct: 117 ELSGVGTEGNNPNTVRDPGFAWMTTFLFVVCFVGLFILIPLRKIMIVDLKLTFPSGLATA 176

Query: 64  HLINSFHTTEGARLAK 79
            LIN FH T+G ++AK
Sbjct: 177 VLINGFH-TQGDKMAK 191


>Glyma09g41800.1 
          Length = 608

 Score = 50.1 bits (118), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 1   MSPEIAKQ--------SSEANTAMDMKIPGLGWMVAXXXXXXXXXXXXXXXXRKIMIVDF 52
           MSP IA Q                  K   LGWM                  RK+MI+ +
Sbjct: 90  MSPYIASQVDGGGGGGGGGGKPPTKKKTISLGWMFGFLFFVSFVGLFPIVPLRKVMILKY 149

Query: 53  KLTYPSGTATAHLINSFHT 71
           KL+YPSGTATA LINS HT
Sbjct: 150 KLSYPSGTATALLINSLHT 168